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Sed0009021 (gene) of Chayote v1 genome

Gene IDSed0009021
OrganismSechium edule (Chayote v1)
DescriptionLoricrin-like
Genome locationLG05:41718000..41718230
RNA-Seq ExpressionSed0009021
SyntenySed0009021
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2611902.1 loricrin-like [Pyrus ussuriensis x Pyrus communis]1.1e-0455Show/hide
Query:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG
        M R  V    G  G+V  +    +SGGL +L  IL+S+SLISM+IFACG   GS +KR GGG  CGGGGGGCGG   CGG
Subjt:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0856.7Show/hide
Query:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACG-SSDGSKSKRD----------------GGGGGCGGGGGGCGGC----GGCGG
        M R I AA  GG GDVT  SSGGL +L+ +LLS+SL+SMIIFACG SS  +K KR+                GGGGGCGGGGGGCGG     GGCGG
Subjt:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACG-SSDGSKSKRD----------------GGGGGCGGGGGGCGGC----GGCGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]7.7e-1169.33Show/hide
Query:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACG-SSDGSKSKRDGGGGGCGGGGGGCGGCGGC
        M RPI AA  GG GDVT  SSGGL +L+ IL+S+SL+SMIIFACG SS  +K KR+GGGGG G GGGGCGG GGC
Subjt:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACG-SSDGSKSKRDGGGGGCGGGGGGCGGCGGC

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]9.1e-1274.07Show/hide
Query:  MARPIVAAA--HGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGG--GGGCGGGGGGC-GGCGGCGG
        M RPI+AAA   GGF DVT +SSGGLF+LSAILLSISL+SMIIFACG+S+  K K  GG  GGG GGGGGGC GGCGGCGG
Subjt:  MARPIVAAA--HGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGG--GGGCGGGGGGC-GGCGGCGG

ONI16710.1 hypothetical protein PRUPE_3G116900 [Prunus persica]2.8e-0554.67Show/hide
Query:  MARPIVAAAHGGFGDVTWL---SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDG----GGGGCGGGGGGC
        MAR       GG  +   +   +SGG+F+L  ILLS+SLISM+IFACG  +GS  KR G    GGGGCGGGGGGC
Subjt:  MARPIVAAAHGGFGDVTWL---SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDG----GGGGCGGGGGGC

TrEMBL top hitse value%identityAlignment
A0A061DKB8 Uncharacterized protein3.4e-0453.33Show/hide
Query:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRD--GGGGGCGGGGGGCGGCGG
        MAR +V     G G    + SGGLF+L  I+ S+S+ISM+IFACG ++  K + +   GGGGCG GGGGCGGCGG
Subjt:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRD--GGGGGCGGGGGGCGGCGG

A0A0A0LJD5 Uncharacterized protein5.8e-0459.49Show/hide
Query:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKR---DGGGGGCGGGGGGCGGCGGCGG
        M RPI A      GDVT    GGL +LS ILLSISL+SMIIFAC +   ++ +R   DGG GGC  GGGGCGG GGCGG
Subjt:  MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKR---DGGGGGCGGGGGGCGGCGGCGG

A0A540MXA9 Uncharacterized protein4.4e-0457.5Show/hide
Query:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG
        MAR  V    G  G+V  +    +SGGL +L  IL+S+SLISM+IFACG S GS   R  GGGG GGGGGGCGG GG GG
Subjt:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG

A0A5N5GEI7 Loricrin-like5.2e-0555Show/hide
Query:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG
        M R  V    G  G+V  +    +SGGL +L  IL+S+SLISM+IFACG   GS +KR GGG  CGGGGGGCGG   CGG
Subjt:  MARPIVAAAHGGFGDVTWL----SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG

M5WY52 Uncharacterized protein1.4e-0554.67Show/hide
Query:  MARPIVAAAHGGFGDVTWL---SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDG----GGGGCGGGGGGC
        MAR       GG  +   +   +SGG+F+L  ILLS+SLISM+IFACG  +GS  KR G    GGGGCGGGGGGC
Subjt:  MARPIVAAAHGGFGDVTWL---SSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDG----GGGGCGGGGGGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCCAATTGTTGCCGCCGCACACGGCGGCTTCGGAGATGTTACCTGGCTGAGCTCCGGCGGGCTGTTTATGCTTTCGGCCATTCTTCTATCCATCTCTCTCAT
ATCAATGATCATATTTGCTTGCGGCAGCTCTGATGGCTCGAAAAGTAAAAGAGATGGCGGCGGTGGAGGTTGCGGCGGCGGCGGTGGGGGCTGCGGTGGATGCGGTGGCT
GTGGCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCCAATTGTTGCCGCCGCACACGGCGGCTTCGGAGATGTTACCTGGCTGAGCTCCGGCGGGCTGTTTATGCTTTCGGCCATTCTTCTATCCATCTCTCTCAT
ATCAATGATCATATTTGCTTGCGGCAGCTCTGATGGCTCGAAAAGTAAAAGAGATGGCGGCGGTGGAGGTTGCGGCGGCGGCGGTGGGGGCTGCGGTGGATGCGGTGGCT
GTGGCGGCTGA
Protein sequenceShow/hide protein sequence
MARPIVAAAHGGFGDVTWLSSGGLFMLSAILLSISLISMIIFACGSSDGSKSKRDGGGGGCGGGGGGCGGCGGCGG