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Sed0009045 (gene) of Chayote v1 genome

Gene IDSed0009045
OrganismSechium edule (Chayote v1)
DescriptionDefensin-like protein
Genome locationLG01:167892..168125
RNA-Seq ExpressionSed0009045
SyntenySed0009045
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50468.1 defensin-like protein 2 [Citrullus lanatus]1.5e-1862.82Show/hide
Query:  MKKWSLFPTLAFVLLILS------------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   S  PTL  +LLI S            GRVC+SQSH FHG C+ DHNCAVVCR EGFSGGDC GFRRRCFCTR C
Subjt:  MKKWSLFPTLAFVLLILS------------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

KAF8022983.1 hypothetical protein BT93_F0482 [Corymbia citriodora subsp. variegata]1.1e-1866.18Show/hide
Query:  MKKWSLFPTLAFVLLI--LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M+   LF  L  VL      GR+C+SQSHGFHG+C+S HNCA+VCRNEGFSGG C+GFRRRCFCT+HC
Subjt:  MKKWSLFPTLAFVLLI--LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

KAG6571314.1 Defensin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1964.94Show/hide
Query:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   SL PTL  +LLI S            RVC+SQSH FHG C S+HNCAVVCR EGFSGGDC GFRRRCFCTRHC
Subjt:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

XP_022931974.1 defensin-like protein 1 [Cucurbita moschata]1.8e-1964.94Show/hide
Query:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   SL PTL  +LLI S            RVC+SQSH FHG+C S+HNCAVVCR EGFSGGDC GFRRRCFCTRHC
Subjt:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

XP_022973846.1 defensin-like protein 1 [Cucurbita maxima]7.9e-2066.23Show/hide
Query:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   SL PTL  +LLI S            RVC+SQSH FHG CLS+HNCAVVCR EGFSGGDC GFRRRCFCTRHC
Subjt:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

TrEMBL top hitse value%identityAlignment
A0A5N6QE93 Knot1 domain-containing protein1.6e-1884Show/hide
Query:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        + GRVCESQSH FHG CL DHNCA+VCRNEGFSGGDCKG RRRCFCTR C
Subjt:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

A0A6J1EVR5 defensin-like protein 18.5e-2064.94Show/hide
Query:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   SL PTL  +LLI S            RVC+SQSH FHG+C S+HNCAVVCR EGFSGGDC GFRRRCFCTRHC
Subjt:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

A0A6J1I9R5 defensin-like protein 13.8e-2066.23Show/hide
Query:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   SL PTL  +LLI S            RVC+SQSH FHG CLS+HNCAVVCR EGFSGGDC GFRRRCFCTRHC
Subjt:  MKKWSLFPTLAFVLLILS-----------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

K7KVC7 Knot1 domain-containing protein2.7e-1879.63Show/hide
Query:  VLLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        V++   GRVCESQSHGFHG C  DHNCA+VCRNEGFSGG CKGFRRRCFCTR C
Subjt:  VLLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

W5RNL9 Defensin-like protein 27.2e-1962.82Show/hide
Query:  MKKWSLFPTLAFVLLILS------------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        M   S  PTL  +LLI S            GRVC+SQSH FHG C+ DHNCAVVCR EGFSGGDC GFRRRCFCTR C
Subjt:  MKKWSLFPTLAFVLLILS------------GRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

SwissProt top hitse value%identityAlignment
P82659 Defensin SD21.4e-1669.23Show/hide
Query:  LILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        L++  R CESQSH F G CLSD NCA VC +E FSGG C+GFRRRCFCT HC
Subjt:  LILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

P83399 Defensin-like protein 12.4e-1982.98Show/hide
Query:  RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        RVCESQSHGF GAC  DHNCA+VCRNEGFSGG+C+GFRRRCFCT  C
Subjt:  RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

Q07502 Defensin-like protein3.8e-1774.07Show/hide
Query:  VLLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        V++   GRVCESQSHGFHG C  DHNCA+VCRNEGFSGG CK   RRCFCTR C
Subjt:  VLLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

Q39182 Defensin-like protein 21.9e-1670Show/hide
Query:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        +  R CESQSH F G C+S  NCA VC NEGF GG+C+GFRRRCFCTRHC
Subjt:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

Q9ZUL7 Defensin-like protein 11.1e-1658.46Show/hide
Query:  LAFVLLILSG--------RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        L F++ I +G        R CES+SH F G C+S HNCA VC NEGF GG C+GFRRRC+CTRHC
Subjt:  LAFVLLILSG--------RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 669.6e-1660.32Show/hide
Query:  LFPTLAFV--LLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        LF  LA V  L+ +  R CE+ S+ F+G CLS  NCA VC NEGFS GDC+GFRRRC CTR C
Subjt:  LFPTLAFV--LLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

AT2G02100.1 low-molecular-weight cysteine-rich 691.3e-1770Show/hide
Query:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        +  R CESQSH F G C+S  NCA VC NEGF GG+C+GFRRRCFCTRHC
Subjt:  LSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein5.6e-1656.06Show/hide
Query:  LFPTLAFVL-----LILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        LF  + FV      + +  R C SQS  F G C+SD NC  VC NEGF GGDC+GFRRRCFCTR+C
Subjt:  LFPTLAFVL-----LILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

AT2G02130.1 low-molecular-weight cysteine-rich 687.8e-1858.46Show/hide
Query:  LAFVLLILSG--------RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        L F++ I +G        R CES+SH F G C+S HNCA VC NEGF GG C+GFRRRC+CTRHC
Subjt:  LAFVLLILSG--------RVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein1.5e-1657.81Show/hide
Query:  FVLLIL---------SGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC
        F+LL+L          GR C+S+SH F   C S+HNCA+VCRNEGFSGG C GF RRC+CTR C
Subjt:  FVLLIL---------SGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATGGAGCTTGTTCCCAACTCTGGCATTTGTGCTCCTGATCTTGTCGGGGCGGGTGTGCGAGTCCCAGAGCCACGGGTTTCATGGGGCCTGCCTCAGCGACCA
CAACTGCGCCGTCGTCTGCAGAAACGAAGGCTTCTCCGGCGGTGACTGCAAGGGCTTCCGCCGCCGCTGCTTCTGCACTCGCCATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATGGAGCTTGTTCCCAACTCTGGCATTTGTGCTCCTGATCTTGTCGGGGCGGGTGTGCGAGTCCCAGAGCCACGGGTTTCATGGGGCCTGCCTCAGCGACCA
CAACTGCGCCGTCGTCTGCAGAAACGAAGGCTTCTCCGGCGGTGACTGCAAGGGCTTCCGCCGCCGCTGCTTCTGCACTCGCCATTGTTAA
Protein sequenceShow/hide protein sequence
MKKWSLFPTLAFVLLILSGRVCESQSHGFHGACLSDHNCAVVCRNEGFSGGDCKGFRRRCFCTRHC