; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009095 (gene) of Chayote v1 genome

Gene IDSed0009095
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein JAGGED-like
Genome locationLG03:7509033..7514029
RNA-Seq ExpressionSed0009095
SyntenySed0009095
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR031113 - Zinc finger protein JAGGED-like
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601780.1 Zinc finger protein JAGGED, partial [Cucurbita argyrosperma subsp. sororia]3.0e-11682.29Show/hide
Query:  VLAMLDKRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNM
        ++  L KRS+GSPLDLNNLPEDYIRD KQIIED+STGHRKKKSG KEG EE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+
Subjt:  VLAMLDKRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNM

Query:  AAQ-PPPHLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMG
        A Q PPPHLGCCHSM PGSYHT G GG G DPTL LRFPTRMF GSSP TLLPPT  PP P PPHQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+G
Subjt:  AAQ-PPPHLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMG

Query:  NPSQCSHQNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF
        NP+QCSHQ +NYGST  S+E SSYTCIGAPVG AA FG    G GRDGS    QQQRLDVPSSINRFQDGF
Subjt:  NPSQCSHQNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF

KGN51212.2 hypothetical protein Csa_008797 [Cucumis sativus]5.1e-11683.08Show/hide
Query:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PP
        +RSEGSPLDLNNLPEDYIRDGKQIIEDSS+GHRKKKSG+KEGKEE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+AAQ PP
Subjt:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PP

Query:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS
        PHLGCCHSM P +YH+  G G  G D TLPLRFPTRMFSGSSP TLLP  PP P P  HQPYLY+SP+RPSSFP YYPPPQA +NDYYVGHV+GNPSQCS
Subjt:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS

Query:  HQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF
        HQ +NYGS+SVE SSYTCIGAPVGHAA  FGG      GGRDGSQ   QQQRLDVPSSINRFQDGF
Subjt:  HQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF

XP_022971830.1 zinc finger protein JAGGED-like [Cucurbita maxima]3.9e-11684.09Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP
        RS+GSPLDLNNLPEDYIRD KQIIED+STGHRKKKSG KEG EE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+A Q PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP

Query:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH
        HLGCCHSM PGSYHT G GG G DPTL LRFPTRMF GSSP TLLPPT  PP P PPHQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+GNP+QCSH
Subjt:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH

Query:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF
        Q +NYGST  S+E SSYTCIGAPVG AA FG    GGGRDGS    QQQRLDVPSSINRFQDGF
Subjt:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF

XP_023538934.1 zinc finger protein JAGGED-like [Cucurbita pepo subsp. pepo]1.3e-11684.03Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPPH
        RS+GSPLDLNNLPEDYIRD KQIIED+STGHRKKKSG KEG EE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+A Q PPH
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPPH

Query:  LGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQ
        LGCCHSM PGSYHT G GG G DPTL LRFPTRMF GSSP TLLPPT  PP P PPHQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+GNP+QCSHQ
Subjt:  LGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQ

Query:  NINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF
         +NYGST  S+E SSYTCIGAPVG AA FG    GGGRDGS    QQQRLDVPSSINRFQDGF
Subjt:  NINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF

XP_038876123.1 zinc finger protein JAGGED-like [Benincasa hispida]2.4e-12185.39Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ--PP
        RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSG+KEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+AAQ  PP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ--PP

Query:  PHLGCCHSMPPGSYHT-GGGGAGV--DPTLPLRFPTRMFSGSSPATLLPPTPPLPQPP-HQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQC
        PHLGCCHSM P +YHT GGGG+GV  D TLPLRFPTRMFSGSSP++LLP  PP P PP HQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+GNPSQC
Subjt:  PHLGCCHSMPPGSYHT-GGGGAGV--DPTLPLRFPTRMFSGSSPATLLPPTPPLPQPP-HQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQC

Query:  SHQNINYGSTSVEPSSYTCIGAPVGHAAPFGG------GGRDGS-QQQKQQQRLDVPSSINRFQDGF
        SHQ +NYGS+SVEP+SY C+GAPVGH A FGG      GGRDGS QQQ+QQQRLDVPSSINRFQDGF
Subjt:  SHQNINYGSTSVEPSSYTCIGAPVGHAAPFGG------GGRDGS-QQQKQQQRLDVPSSINRFQDGF

TrEMBL top hitse value%identityAlignment
A0A0A0KTC2 C2H2-type domain-containing protein1.1e-11682.53Show/hide
Query:  MLDKRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ
        M+ +RSEGSPLDLNNLPEDYIRDGKQIIEDSS+GHRKKKSG+KEGKEE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+AAQ
Subjt:  MLDKRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ

Query:  -PPPHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPS
         PPPHLGCCHSM P +YH+  G G  G D TLPLRFPTRMFSGSSP TLLP  PP P P  HQPYLY+SP+RPSSFP YYPPPQA +NDYYVGHV+GNPS
Subjt:  -PPPHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPS

Query:  QCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF
        QCSHQ +NYGS+SVE SSYTCIGAPVGHAA  FGG      GGRDGSQ   QQQRLDVPSSINRFQDGF
Subjt:  QCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF

A0A1S3CQ11 zinc finger protein JAGGED5.5e-11683.08Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ--PP
        RSEGSPLDLNNLPEDYIRDGKQIIEDSS+GHRKKKSG+KEGKEE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+AAQ  PP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ--PP

Query:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS
        PHLGCCHSM P +YHT  G G  G D TLPLRFPTRMFSGSSP TLLP  PP P P  HQPYLY+SP+RPSSFP YYPPPQA +NDYYVGHV+GNPSQCS
Subjt:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS

Query:  HQNINYGSTSVEPSSYTCIGAPVGHAAP-FGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF
        HQ +NYGS+ VE SSYTCIGAPVGHAA  FGG      GGRDGSQ   QQQRLDVPSSINRFQDGF
Subjt:  HQNINYGSTSVEPSSYTCIGAPVGHAAP-FGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF

A0A5A7U1F5 Zinc finger protein JAGGED2.5e-11683.08Show/hide
Query:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PP
        +RSEGSPLDLNNLPEDYIRDGKQIIEDSS+GHRKKKSG+KEGKEE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+AAQ PP
Subjt:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PP

Query:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS
        PHLGCCHSM P +YHT  G G  G D TLPLRFPTRMFSGSSP TLLP  PP P P  HQPYLY+SP+RPSSFP YYPPPQA +NDYYVGHV+GNPSQCS
Subjt:  PHLGCCHSMPPGSYHT--GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQP-PHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCS

Query:  HQNINYGSTSVEPSSYTCIGAPVGHAAP-FGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF
        HQ +NYGS+ VE SSYTCIGAPVGHAA  FGG      GGRDGSQ   QQQRLDVPSSINRFQDGF
Subjt:  HQNINYGSTSVEPSSYTCIGAPVGHAAP-FGG------GGRDGSQQQKQQQRLDVPSSINRFQDGF

A0A6J1GRC2 zinc finger protein JAGGED-like9.4e-11683.71Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP
        RS+GSPLDLNNLPEDYIRD KQIIED+STGHRKKKSG KEG EE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+A Q PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP

Query:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH
        HLGCCHSM PGSYHT G GG G DPTL LRFPTRMF GSSP TLLPPT  PP P PPHQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+GNP+QCSH
Subjt:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH

Query:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF
        Q +NYGST  S+E SSYTCIGAPVG AA FG    G GRDGS    QQQRLDVPSSINRFQDGF
Subjt:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF

A0A6J1I6U1 zinc finger protein JAGGED-like1.9e-11684.09Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP
        RS+GSPLDLNNLPEDYIRD KQIIED+STGHRKKKSG KEG EE+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN+A Q PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQ-PPP

Query:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH
        HLGCCHSM PGSYHT G GG G DPTL LRFPTRMF GSSP TLLPPT  PP P PPHQPYLYSSPSRPSSFP YYPPPQA +NDYYVGHV+GNP+QCSH
Subjt:  HLGCCHSMPPGSYHT-GGGGAGVDPTLPLRFPTRMFSGSSPATLLPPT--PPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSH

Query:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF
        Q +NYGST  S+E SSYTCIGAPVG AA FG    GGGRDGS    QQQRLDVPSSINRFQDGF
Subjt:  QNINYGST--SVEPSSYTCIGAPVGHAAPFG----GGGRDGSQQQKQQQRLDVPSSINRFQDGF

SwissProt top hitse value%identityAlignment
Q39265 Zinc finger protein 63.2e-0435.82Show/hide
Query:  GKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQL
        G  ++E +S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + L RA+ L
Subjt:  GKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQL

Q6S591 Zinc finger protein JAGGED5.1e-4244.36Show/hide
Query:  RSEGSPLDLNNLPEDYIRDG-KQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP
        R E + LDLNNLP+D+ +DG KQ +E+ S+  ++KK G KEGK+E+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN+ARQLV+ ND +    PP
Subjt:  RSEGSPLDLNNLPEDYIRDG-KQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP

Query:  HLGCCHSMPPGSYHTGGGGAGVDPTLPLR-FPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVG-------HVMGNP
         +      P G +HT       DPT+    + + M    S +T L P PP+P PP  PY YSS             P    NDYY+         +  +P
Subjt:  HLGCCHSMPPGSYHTGGGGAGVDPTLPLR-FPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVG-------HVMGNP

Query:  SQCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG-----------GGRDGSQQQKQQQRLD--VPSSINRFQD
        +  +   ++Y + S     YTC+GAP+G    P  G            GRDG      +QRLD  +   INRFQD
Subjt:  SQCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG-----------GGRDGSQQQKQQQRLD--VPSSINRFQD

Q6S592 Zinc finger protein JAGGED-like1.3e-2640.18Show/hide
Query:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP
        +  E + LDLNNLP+D  RD     E+  +       G +E + + GK YECRFCSLKF KSQALGGHMNRHRQERETE+LN+AR+LV  ND+     PP
Subjt:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP

Query:  HLGCCHSMPPGSYHTGGGGAG-VDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQN
        H G     P  SYH G    G +    P+ +P R FS    +++L   P        PYLY   S P      +P     + +    H     S C    
Subjt:  HLGCCHSMPPGSYHTGGGGAG-VDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQN

Query:  INYGSTSVEPSSYTCIGAPVGHAA
           G  ++  SSYT IGAPV + +
Subjt:  INYGSTSVEPSSYTCIGAPVGHAA

Q9FKA9 Protein LATE FLOWERING5.5e-0444.23Show/hide
Query:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNMAAQP
        +++ C FCS KF  SQALGGH N H++ER       RA   V +ND +   P
Subjt:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNMAAQP

Q9LG97 Zinc finger protein STAMENLESS 15.3e-3944.53Show/hide
Query:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSST-------GHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN
        +R EGSPLDLNNLP+++   GKQ +E S+T         R  K     GK+EAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVF ND+
Subjt:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSST-------GHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDN

Query:  M------------------AAQPPPHLGCCHSMPPGSYHTGGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPS-----SFP
        +                  AA PPP      +M  G     GGG G DP +PLR P +         L PP P    PP+  YLY++ + PS     S+P
Subjt:  M------------------AAQPPPHLGCCHSMPPGSYHTGGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPS-----SFP

Query:  PYYPPP-----QAPMNDYYVGHVMGNPSQCSHQNINYGSTSVEP------SSYTCIGAPVGHAAP
          YP P      A + DY +GH            ++ G   V P      +S++C GAP+  AAP
Subjt:  PYYPPP-----QAPMNDYYVGHVMGNPSQCSHQNINYGSTSVEP------SSYTCIGAPVGHAAP

Arabidopsis top hitse value%identityAlignment
AT1G13400.1 C2H2 and C2HC zinc fingers superfamily protein9.6e-2840.18Show/hide
Query:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP
        +  E + LDLNNLP+D  RD     E+  +       G +E + + GK YECRFCSLKF KSQALGGHMNRHRQERETE+LN+AR+LV  ND+     PP
Subjt:  KRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP

Query:  HLGCCHSMPPGSYHTGGGGAG-VDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQN
        H G     P  SYH G    G +    P+ +P R FS    +++L   P        PYLY   S P      +P     + +    H     S C    
Subjt:  HLGCCHSMPPGSYHTGGGGAG-VDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHVMGNPSQCSHQN

Query:  INYGSTSVEPSSYTCIGAPVGHAA
           G  ++  SSYT IGAPV + +
Subjt:  INYGSTSVEPSSYTCIGAPVGHAA

AT1G67030.1 zinc finger protein 62.3e-0535.82Show/hide
Query:  GKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQL
        G  ++E +S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + L RA+ L
Subjt:  GKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQL

AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein3.6e-4344.36Show/hide
Query:  RSEGSPLDLNNLPEDYIRDG-KQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP
        R E + LDLNNLP+D+ +DG KQ +E+ S+  ++KK G KEGK+E+GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN+ARQLV+ ND +    PP
Subjt:  RSEGSPLDLNNLPEDYIRDG-KQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNMAAQPPP

Query:  HLGCCHSMPPGSYHTGGGGAGVDPTLPLR-FPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVG-------HVMGNP
         +      P G +HT       DPT+    + + M    S +T L P PP+P PP  PY YSS             P    NDYY+         +  +P
Subjt:  HLGCCHSMPPGSYHTGGGGAGVDPTLPLR-FPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVG-------HVMGNP

Query:  SQCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG-----------GGRDGSQQQKQQQRLD--VPSSINRFQD
        +  +   ++Y + S     YTC+GAP+G    P  G            GRDG      +QRLD  +   INRFQD
Subjt:  SQCSHQNINYGSTSVEPSSYTCIGAPVGHAA-PFGG-----------GGRDGSQQQKQQQRLD--VPSSINRFQD

AT5G05120.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-0655.56Show/hide
Query:  VYECRFCSLKFCKSQALGGHMNRHRQERETETLNRA
        +Y+C++C  KF K+QALGGH N HR+ERE E   +A
Subjt:  VYECRFCSLKFCKSQALGGHMNRHRQERETETLNRA

AT5G48890.1 C2H2-like zinc finger protein3.9e-0544.23Show/hide
Query:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNMAAQP
        +++ C FCS KF  SQALGGH N H++ER       RA   V +ND +   P
Subjt:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNMAAQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACAATTTTCATGGTATTATAGCCTCACATTGCTCAATATTAGAAGGTTGTTTGGGAAATTTGAAGCACTATGTATTAGCCATGCTTGACAAGCGATCCGAGGG
GAGCCCTTTGGACCTCAACAACTTACCAGAAGATTATATCAGAGATGGCAAACAGATCATTGAAGATAGCTCTACGGGTCATAGGAAAAAGAAAAGTGGAGTGAAGGAGG
GAAAAGAAGAGGCTGGAAAGGTGTATGAATGCAGGTTTTGTTCGCTCAAGTTTTGCAAATCTCAGGCTCTTGGTGGCCATATGAACCGCCATCGCCAAGAGAGAGAGACA
GAGACACTGAATCGTGCTCGTCAGCTAGTTTTCAGTAACGATAATATGGCTGCTCAACCTCCTCCTCATTTAGGGTGCTGTCATTCAATGCCACCGGGAAGCTACCATAC
TGGCGGCGGCGGTGCAGGAGTTGATCCAACGCTACCTCTCAGATTCCCAACCAGAATGTTCTCAGGCTCCTCCCCAGCAACCCTACTGCCACCGACGCCGCCACTGCCTC
AGCCACCGCACCAGCCCTATCTATACAGCTCGCCATCACGGCCGTCCAGTTTCCCGCCATACTATCCTCCTCCACAAGCCCCCATGAACGACTACTATGTGGGCCATGTC
ATGGGAAACCCCTCGCAATGCAGCCACCAGAACATAAACTACGGCTCGACCTCGGTGGAGCCGAGCAGCTACACGTGTATTGGGGCTCCCGTGGGGCACGCAGCGCCGTT
CGGGGGTGGAGGAAGAGACGGATCACAGCAGCAGAAGCAGCAGCAGCGTTTGGATGTTCCTTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACAATTTTCATGGTATTATAGCCTCACATTGCTCAATATTAGAAGGTTGTTTGGGAAATTTGAAGCACTATGTATTAGCCATGCTTGACAAGCGATCCGAGGG
GAGCCCTTTGGACCTCAACAACTTACCAGAAGATTATATCAGAGATGGCAAACAGATCATTGAAGATAGCTCTACGGGTCATAGGAAAAAGAAAAGTGGAGTGAAGGAGG
GAAAAGAAGAGGCTGGAAAGGTGTATGAATGCAGGTTTTGTTCGCTCAAGTTTTGCAAATCTCAGGCTCTTGGTGGCCATATGAACCGCCATCGCCAAGAGAGAGAGACA
GAGACACTGAATCGTGCTCGTCAGCTAGTTTTCAGTAACGATAATATGGCTGCTCAACCTCCTCCTCATTTAGGGTGCTGTCATTCAATGCCACCGGGAAGCTACCATAC
TGGCGGCGGCGGTGCAGGAGTTGATCCAACGCTACCTCTCAGATTCCCAACCAGAATGTTCTCAGGCTCCTCCCCAGCAACCCTACTGCCACCGACGCCGCCACTGCCTC
AGCCACCGCACCAGCCCTATCTATACAGCTCGCCATCACGGCCGTCCAGTTTCCCGCCATACTATCCTCCTCCACAAGCCCCCATGAACGACTACTATGTGGGCCATGTC
ATGGGAAACCCCTCGCAATGCAGCCACCAGAACATAAACTACGGCTCGACCTCGGTGGAGCCGAGCAGCTACACGTGTATTGGGGCTCCCGTGGGGCACGCAGCGCCGTT
CGGGGGTGGAGGAAGAGACGGATCACAGCAGCAGAAGCAGCAGCAGCGTTTGGATGTTCCTTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA
Protein sequenceShow/hide protein sequence
MGYNFHGIIASHCSILEGCLGNLKHYVLAMLDKRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGVKEGKEEAGKVYECRFCSLKFCKSQALGGHMNRHRQERET
ETLNRARQLVFSNDNMAAQPPPHLGCCHSMPPGSYHTGGGGAGVDPTLPLRFPTRMFSGSSPATLLPPTPPLPQPPHQPYLYSSPSRPSSFPPYYPPPQAPMNDYYVGHV
MGNPSQCSHQNINYGSTSVEPSSYTCIGAPVGHAAPFGGGGRDGSQQQKQQQRLDVPSSINRFQDGF