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Sed0009112 (gene) of Chayote v1 genome

Gene IDSed0009112
OrganismSechium edule (Chayote v1)
Descriptionankyrin repeat-containing protein NPR4-like
Genome locationLG01:61042183..61047013
RNA-Seq ExpressionSed0009112
SyntenySed0009112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]4.9e-0626Show/hide
Query:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------
        T E T   S      T++   +P   P FN    HPLGTV+TVKLDDKNYSLWRGM            +    +++P +    P                
Subjt:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------

Query:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG
                                          WK   +L                                  Q SESLKLAGE V  NYLMSC+LSG
Subjt:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG

Query:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH
        LEAEYLPI                     +   +S S Q L    +  +NT +       ++    S+   N +   Q+S       +S    GQ RG++
Subjt:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]4.9e-0626Show/hide
Query:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------
        T E T   S      T++   +P   P FN    HPLGTV+TVKLDDKNYSLWRGM            +    +++P +    P                
Subjt:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------

Query:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG
                                          WK   +L                                  Q SESLKLAGE V  NYLMSC+LSG
Subjt:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG

Query:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH
        LEAEYLPI                     +   +S S Q L    +  +NT +       ++    S+   N +   Q+S       +S    GQ RG++
Subjt:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH

TrEMBL top hitse value%identityAlignment
A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like4.9e-0478.79Show/hide
Query:  QTSESLKLAGESVTMNYLMSCILSGLEAEYLPI
        QTSE LKLAGE VT++YL SCIL+G EAEYLPI
Subjt:  QTSESLKLAGESVTMNYLMSCILSGLEAEYLPI

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like3.9e-0146.94Show/hide
Query:  STSAMSQASTPQTSLPTVSPTSFPSFNHPLGTVMTVKLDDKNYSLWRGM
        +    S ++T  +   TV      SF HPL T +TVKLDDKNY+LW+GM
Subjt:  STSAMSQASTPQTSLPTVSPTSFPSFNHPLGTVMTVKLDDKNYSLWRGM

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X22.4e-0626Show/hide
Query:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------
        T E T   S      T++   +P   P FN    HPLGTV+TVKLDDKNYSLWRGM            +    +++P +    P                
Subjt:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------

Query:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG
                                          WK   +L                                  Q SESLKLAGE V  NYLMSC+LSG
Subjt:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG

Query:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH
        LEAEYLPI                     +   +S S Q L    +  +NT +       ++    S+   N +   Q+S       +S    GQ RG++
Subjt:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X12.4e-0626Show/hide
Query:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------
        T E T   S      T++   +P   P FN    HPLGTV+TVKLDDKNYSLWRGM            +    +++P +    P                
Subjt:  TNESTSAMSQASTPQTSLPTVSPTSFPSFN----HPLGTVMTVKLDDKNYSLWRGM-----------WHAKSLISQPLERFGVP----------------

Query:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG
                                          WK   +L                                  Q SESLKLAGE V  NYLMSC+LSG
Subjt:  ----------------------------------WKTFLEL----------------------------------QTSESLKLAGESVTMNYLMSCILSG

Query:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH
        LEAEYLPI                     +   +S S Q L    +  +NT +       ++    S+   N +   Q+S       +S    GQ RG++
Subjt:  LEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSS----NHEKSSLAAGQSRGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATCAGAGCTTACTAGCAAACGCTGTTATGGCTACCAATGAAAGCACCTCTGCAATGTCTCAAGCTAGCACACCACAAACTTCCCTTCCTACTGTGTCACCCAC
AAGTTTCCCTTCCTTTAACCATCCCCTGGGCACTGTTATGACAGTGAAACTTGATGACAAAAATTACTCTTTATGGCGTGGCATGTGGCATGCGAAGTCATTGATCTCAC
AACCTCTTGAGAGGTTTGGTGTTCCTTGGAAGACCTTTTTGGAGCTGCAAACATCTGAAAGCTTAAAGCTAGCAGGAGAATCGGTAACAATGAATTATTTGATGTCATGT
ATCTTGTCTGGTTTGGAAGCTGAATACTTGCCCATAGACAAGAAAACAAAGAAGGTGCTACTGCAAGGGACTCTTAAAAATGGGCTTTATCAACTCAATCTTCATTTGAA
TGAATCAAAATCTGGTCAAGTTTTGTCTTGTCTTAGCCTTCCAATCCAAAATACAAATATTTTAGATAAATCTACTCAAATATCAAGCCCTACTCTTTATTCTGAGTCTC
ATGGTAATGATATTTCTATGTCTCAATCTTCAAACCATGAAAAGAGTTCACTTGCGGCAGGACAATCAAGAGGAACACATATGGAACCATTCAAAAATATAATGCATGGC
TTGTGGCAAAAGGTTTTCACCAAAGTCCAGCATGTTGAGAATCCCACATTGTTAAGGAAAGGATATGTCCAAGTGTTTAAAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATCAGAGCTTACTAGCAAACGCTGTTATGGCTACCAATGAAAGCACCTCTGCAATGTCTCAAGCTAGCACACCACAAACTTCCCTTCCTACTGTGTCACCCAC
AAGTTTCCCTTCCTTTAACCATCCCCTGGGCACTGTTATGACAGTGAAACTTGATGACAAAAATTACTCTTTATGGCGTGGCATGTGGCATGCGAAGTCATTGATCTCAC
AACCTCTTGAGAGGTTTGGTGTTCCTTGGAAGACCTTTTTGGAGCTGCAAACATCTGAAAGCTTAAAGCTAGCAGGAGAATCGGTAACAATGAATTATTTGATGTCATGT
ATCTTGTCTGGTTTGGAAGCTGAATACTTGCCCATAGACAAGAAAACAAAGAAGGTGCTACTGCAAGGGACTCTTAAAAATGGGCTTTATCAACTCAATCTTCATTTGAA
TGAATCAAAATCTGGTCAAGTTTTGTCTTGTCTTAGCCTTCCAATCCAAAATACAAATATTTTAGATAAATCTACTCAAATATCAAGCCCTACTCTTTATTCTGAGTCTC
ATGGTAATGATATTTCTATGTCTCAATCTTCAAACCATGAAAAGAGTTCACTTGCGGCAGGACAATCAAGAGGAACACATATGGAACCATTCAAAAATATAATGCATGGC
TTGTGGCAAAAGGTTTTCACCAAAGTCCAGCATGTTGAGAATCCCACATTGTTAAGGAAAGGATATGTCCAAGTGTTTAAAAGGTAG
Protein sequenceShow/hide protein sequence
MFYQSLLANAVMATNESTSAMSQASTPQTSLPTVSPTSFPSFNHPLGTVMTVKLDDKNYSLWRGMWHAKSLISQPLERFGVPWKTFLELQTSESLKLAGESVTMNYLMSC
ILSGLEAEYLPIDKKTKKVLLQGTLKNGLYQLNLHLNESKSGQVLSCLSLPIQNTNILDKSTQISSPTLYSESHGNDISMSQSSNHEKSSLAAGQSRGTHMEPFKNIMHG
LWQKVFTKVQHVENPTLLRKGYVQVFKR