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Sed0009176 (gene) of Chayote v1 genome

Gene IDSed0009176
OrganismSechium edule (Chayote v1)
DescriptionNADH:ubiquinone oxidoreductase, ESSS subunit
Genome locationLG03:16887623..16888396
RNA-Seq ExpressionSed0009176
SyntenySed0009176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]2.0e-4484.55Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLP+LRTRGGAAA   QSRW+SPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]2.9e-4383.64Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLPSLRTRGGAA    QSRW+SPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]3.8e-4383.49Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNL
        MLR RLLPSLRTRGGAA    QSRW+SPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+E NL
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNL

Query:  AVSESSESD
        A+S S  S+
Subjt:  AVSESSESD
XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]5.8e-4484.55Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLPSLRTRGGAA    QSRW+SPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]3.8e-4383.64Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLPSLRTRGGAAA   QSRW+SPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+E   
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
TrEMBL top hitse value%identityAlignment
A0A0A0KYE7 Uncharacterized protein2.0e-4282.73Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLL SLRTRGGAAA   +SRW+SPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+E   
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
A0A6J1DCT8 uncharacterized protein LOC1110195659.6e-4584.55Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLP+LRTRGGAAA   QSRW+SPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
A0A6J1EGU8 uncharacterized protein LOC1114324241.4e-4383.64Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLLPSLRTRGGAA    QSRW+SPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
A0A6J1EKL9 uncharacterized protein LOC1114355252.4e-4383.64Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N
        MLR RLL SLRTRGGAAA   QSRW+SPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+EN  
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIEN-N

Query:  LAVSESSESD
        ++ S SSESD
Subjt:  LAVSESSESD
A0A6J1HPH2 uncharacterized protein LOC1114661291.8e-4383.49Show/hide
Query:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNL
        MLR RLLPSLRTRGGAA    QSRW+SPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAH KAL+RLE+E NL
Subjt:  MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNL

Query:  AVSESSESD
        A+S S  S+
Subjt:  AVSESSESD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42310.1 unknown protein1.2e-3667.92Show/hide
Query:  LRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNLA
        LR R+     +R G+ +A   SRW++PGHEERPKGY  NRTP  PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAH KAL+RLE+E    
Subjt:  LRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNLA

Query:  VSESSE
          +SS+
Subjt:  VSESSE
AT3G57785.1 unknown protein2.5e-3779.76Show/hide
Query:  SRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNLAVSESS
        SRW++PGHEERPKGY  NRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAH KAL+RLE+E   +  +SS
Subjt:  SRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNLAVSESS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGGCGCCGCCTTCTCCCTTCTCTCCGCACTCGCGGTGGCGCCGCCGCCGCCGCCGTGCAGAGCCGGTGGAGCAGTCCCGGGCACGAGGAGCGGCCCAAGGGGTA
TCTCTTCAATCGGACGCCGAATCCTCCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATCTTACTAGTTTCCTTACCATCGTCATTCTTGGCGTTGGCC
TCAACGCCAAACCTGATCTCACTATTGAGACCTGGGCTCACCACAAAGCCCTACAACGCCTTGAGATCGAGAACAATCTGGCTGTGTCGGAATCTTCTGAATCTGATTGA
mRNA sequenceShow/hide mRNA sequence
GACGCTTTAGTTTCTCTCACACAGAACTAAGCGATCTCTTTGTTCTCGCTTGATCGGTCGCAGAGTCGCCTTCTCCAACGCCAACGCCCTTCAGAGCCGCCTCAAATATG
CTCCGGCGCCGCCTTCTCCCTTCTCTCCGCACTCGCGGTGGCGCCGCCGCCGCCGCCGTGCAGAGCCGGTGGAGCAGTCCCGGGCACGAGGAGCGGCCCAAGGGGTATCT
CTTCAATCGGACGCCGAATCCTCCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATCTTACTAGTTTCCTTACCATCGTCATTCTTGGCGTTGGCCTCA
ACGCCAAACCTGATCTCACTATTGAGACCTGGGCTCACCACAAAGCCCTACAACGCCTTGAGATCGAGAACAATCTGGCTGTGTCGGAATCTTCTGAATCTGATTGATTT
TTGAAACTTATTTGACTTTGATCTCTGCGTTGAAATGGGGTTTCTGTTATATATACATATATATGGTGGGATTTATGTGATGATGTCGATATTCTGTAGTTCAATAAGTT
TTCCCCTAAATGTTCTTTTTTAGCTTCAATAACAGTTTCTGTGTTTCAATTCAGTTGCCAATGTTGAGTTATGTTAACGGATTCCCAATAATTTAGCTCTCTGGAATATG
CTATTCAGTAACTTATCTTGGTTTTGTTTAGTAAGTAATGCCATTGGTCTTTTAAGCATAATTTGTTGTTCAATTACAACAGATGTTATTATATTTTAGGTTATCTTGTT
GTTT
Protein sequenceShow/hide protein sequence
MLRRRLLPSLRTRGGAAAAAVQSRWSSPGHEERPKGYLFNRTPNPPGQSRKWEDWELPCYLTSFLTIVILGVGLNAKPDLTIETWAHHKALQRLEIENNLAVSESSESD