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Sed0009180 (gene) of Chayote v1 genome

Gene IDSed0009180
OrganismSechium edule (Chayote v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationLG12:30147721..30159954
RNA-Seq ExpressionSed0009180
SyntenySed0009180
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587488.1 Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3888.54Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKT L  S FRSQSQ+DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

XP_022135509.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia]7.8e-3885.42Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAF +N+TTL  SHFRSQSQ DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIK++GD+LTIVVVAGCCYEIYVKATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

XP_022933942.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata]1.3e-3787.5Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKT L  S FRSQSQ+DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMR+EARQA T
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

XP_022969157.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]9.2e-3988.54Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKTTL  SHFRSQSQ DPS+LSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYV+ATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

XP_023529214.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]1.9e-3989.58Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKTT   SHFRSQSQ+DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

TrEMBL top hitse value%identityAlignment
A0A0A0LUC0 Uncharacterized protein1.1e-3784.54Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEA-RQAKT
        MAF +NK+TL  SHFRSQSQ+DPSSLSRRGFHVEPGTREKALLA++PCLRRF+SHKK VSR+K++GDVLTIVVVAGCCYEIYVKATMR+EA RQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEA-RQAKT

A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like3.8e-3885.42Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAF +N+TTL  SHFRSQSQ DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIK++GD+LTIVVVAGCCYEIYVKATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

A0A6J1E5D6 succinate dehydrogenase subunit 7B, mitochondrial-like3.2e-3785.26Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAK
        MAFL+ KT+L  SHFRSQSQ+DPSS SRRGFH+EPGTREKALLA++P LRRF+SHKKGV+RIKKIGDVLTIVVVAGCCYEIYVKATMR+EARQAK
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAK

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like6.4e-3887.5Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKT L  S FRSQSQ+DPSSLSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMR+EARQA T
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like4.5e-3988.54Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT
        MAFL+NKTTL  SHFRSQSQ DPS+LSRRGFHVEPGTREKALLA++P LRRF+SHKKGVSRIKKIGDVLTIVVVAGCCYEIYV+ATMR+EARQAKT
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKT

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial2.6e-2865.98Show/hide
Query:  MAFLVNKTTLITSHFRSQSQI---DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA
        MAFL+N  + I+SH RS S     D  S+SRRGFH+EPGTREKALLA++  L+RFKSHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A
Subjt:  MAFLVNKTTLITSHFRSQSQI---DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial2.2e-1155.17Show/hide
Query:  RRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKA
        RRGFHVE G REKALL ++  L+RFKS+K  V ++ K+G++LT VV+  C YEI   A
Subjt:  RRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKA

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial4.2e-2667.71Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSL--SRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA
        MAFL+N  T I+SH RS SQ    +L  SRRGFHVE G REKALLA++  LRRFKSHKKGV R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSL--SRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein3.0e-2767.71Show/hide
Query:  MAFLVNKTTLITSHFRSQSQIDPSSL--SRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA
        MAFL+N  T I+SH RS SQ    +L  SRRGFHVE G REKALLA++  LRRFKSHKKGV R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLVNKTTLITSHFRSQSQIDPSSL--SRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA

AT5G62575.1 unknown protein1.4e-2966.67Show/hide
Query:  MAFLVNKTTLITSHFRSQSQI--DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA
        MAFL+N  + I+SH RS S    D  S+SRRGFH+EPGTREKALLA++  L+RFKSHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A
Subjt:  MAFLVNKTTLITSHFRSQSQI--DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA

AT5G62575.2 unknown protein1.9e-2965.98Show/hide
Query:  MAFLVNKTTLITSHFRSQSQI---DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA
        MAFL+N  + I+SH RS S     D  S+SRRGFH+EPGTREKALLA++  L+RFKSHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A
Subjt:  MAFLVNKTTLITSHFRSQSQI---DPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTGGTGAACAAAACCACTCTTATAACCTCCCATTTCCGATCTCAATCGCAGATCGATCCTTCATCGCTCTCGCGCCGCGGATTCCACGTCGAACCAGGGAC
CCGTGAAAAGGCTTTATTAGCCGATGAACCTTGTCTAAGGCGGTTCAAATCACACAAGAAAGGTGTCTCTCGTATAAAAAAAATTGGAGATGTTCTGACAATTGTGGTTG
TCGCAGGATGTTGCTATGAAATCTATGTGAAAGCTACCATGCGGCAAGAAGCTCGGCAGGCGAAGACTGAAGTACATGATGAAATTAGTATCCATTGA
mRNA sequenceShow/hide mRNA sequence
TTTTAAAATCGTAACAATTTTCGAACATAAACTAAATTTATATTTTATCCAATTATTTAACAAATTTAGATAAAAGTTAATTTAGAATATGAAAGGGGGTTTCTTTAGTT
TACAACATTTGTCCCTAATCTCACCGTCACAGCTCTTCTCGCATCTGCAACAATGGCGTTTTTGGTGAACAAAACCACTCTTATAACCTCCCATTTCCGATCTCAATCGC
AGATCGATCCTTCATCGCTCTCGCGCCGCGGATTCCACGTCGAACCAGGGACCCGTGAAAAGGCTTTATTAGCCGATGAACCTTGTCTAAGGCGGTTCAAATCACACAAG
AAAGGTGTCTCTCGTATAAAAAAAATTGGAGATGTTCTGACAATTGTGGTTGTCGCAGGATGTTGCTATGAAATCTATGTGAAAGCTACCATGCGGCAAGAAGCTCGGCA
GGCGAAGACTGAAGTACATGATGAAATTAGTATCCATTGACAATTAAAGTTATGGCTACAGTTTCTACTTTCCAATGCTTTCATTTGTGTGCTAAATAGTTTTTGAAGCA
CAAAATTGTATTTGCCTGTTTTCTGTTAGGTTTTAATCATCAATTATATTTTCTTTTACTTGATCCTAAAGAGATCTCAGAATGCATTTACAATCATTCTGAGCTCCTTT
TGTAACATTATTTTGCCTGCTTCTAAGCTTGAAACAGAACTGACATGGTTGAAGAAGATCAGATGAAACTATTTAAGATTTTGAATGATGAAATTTTTATTTAACTAAAA
AATTTAGGAACAATTTATCATGAAATTGTCTTGGTTGATTGATTGTAATTCAATTCAATTTTACCGTCA
Protein sequenceShow/hide protein sequence
MAFLVNKTTLITSHFRSQSQIDPSSLSRRGFHVEPGTREKALLADEPCLRRFKSHKKGVSRIKKIGDVLTIVVVAGCCYEIYVKATMRQEARQAKTEVHDEISIH