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Sed0009185 (gene) of Chayote v1 genome

Gene IDSed0009185
OrganismSechium edule (Chayote v1)
DescriptionB-box type zinc finger protein
Genome locationLG10:2112067..2112488
RNA-Seq ExpressionSed0009185
SyntenySed0009185
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2856.25Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS
        MKKLC LC  VA++ICESD+A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGP+LV TVA C  CV              RRRV  EEG  S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS

Query:  SNNGA-------HELQIQVVPSYSNSQK
        SN G+        E + QVVP  S S +
Subjt:  SNNGA-------HELQIQVVPSYSNSQK

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]2.2e-2854.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----
        MKKLC LC  VA+++CE+D A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGP LV TVA CH CV +      R  E+ C SSN G     
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----

Query:  ----------HELQIQVVPSYSNS
                   E++ QVVP  S S
Subjt:  ----------HELQIQVVPSYSNS

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]5.8e-2957.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS
        MKKLC LC  VA++ICESD+A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGPKLV TVA C  CV              RRRV  EEG  S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS

Query:  SNNGA-------HELQIQVVPSYSNSQK
        SN G+        E + QVVP  S S +
Subjt:  SNNGA-------HELQIQVVPSYSNSQK

XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]1.7e-2857.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS
        MKKLC LC  VA++ICESDEA LCWGCDSKVH AN +V KH RVL+CH CQ+PTPWNGSGP+LV TVA C  CV              RRRV  EEG  S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS

Query:  SNNGA-------HELQIQVVPSYSNSQK
        SN G+        E + QVVP  S S +
Subjt:  SNNGA-------HELQIQVVPSYSNSQK

XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]9.9e-2954.69Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRVSEEGCASS
        MKKLC LC  VA++ICESD+A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGP+LV TVA C  CV              RRRV EE    S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRVSEEGCASS

Query:  NNGAH--------ELQIQVVPSYSNSQK
        +NG +        E + QVVP  S S +
Subjt:  NNGAH--------ELQIQVVPSYSNSQK

TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein4.8e-2956.2Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----
        MKKLC LC  VA+++CESD A LCWGCDSKVH AN IV KH+RVL+CH CQ+PTPWNGSGP LV TVA CH CV +      R  E+ C SS+ G     
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----

Query:  -------HELQIQVVPSYSNS
                E++ QVVP  S S
Subjt:  -------HELQIQVVPSYSNS

A0A5A7UBH5 Putative zinc finger protein1.4e-2863.16Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNG
        MKKLC LC  VA+++CE+D A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGP LV TVA CH CV +      R  E+ C SSN G
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNG

A0A5D3CS61 Putative zinc finger protein1.1e-2854.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----
        MKKLC LC  VA+++CE+D A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGP LV TVA CH CV +      R  E+ C SSN G     
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRR------RVSEEGCASSNNGA----

Query:  ----------HELQIQVVPSYSNS
                   E++ QVVP  S S
Subjt:  ----------HELQIQVVPSYSNS

A0A6J1GEL4 putative zinc finger protein At1g681902.8e-2957.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS
        MKKLC LC  VA++ICESD+A LCWGCDSKVH AN +V KH+RVL+CH CQ+PTPWNGSGPKLV TVA C  CV              RRRV  EEG  S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS

Query:  SNNGA-------HELQIQVVPSYSNSQK
        SN G+        E + QVVP  S S +
Subjt:  SNNGA-------HELQIQVVPSYSNSQK

A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like8.2e-2957.03Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS
        MKKLC LC  VA++ICESDEA LCWGCDSKVH AN +V KH RVL+CH CQ+PTPWNGSGP+LV TVA C  CV              RRRV  EEG  S
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCV--------------RRRV-SEEGCAS

Query:  SNNGA-------HELQIQVVPSYSNSQK
        SN G+        E + QVVP  S S +
Subjt:  SNNGA-------HELQIQVVPSYSNSQK

SwissProt top hitse value%identityAlignment
Q940T9 Zinc finger protein CONSTANS-LIKE 41.0e-0754Show/hide
Query:  KLCSLC-SSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQ
        KLC  C S+ A+L C  D A LC  CDSKVHAAN + ++H RV +C VC+
Subjt:  KLCSLC-SSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQ

Q96502 Zinc finger protein CONSTANS-LIKE 21.9e-0647.06Show/hide
Query:  KLCSLCSSVA-SLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQS
        + C  C S A ++ CE+D A LC  CD++VHAAN + ++H RV VC  C+S
Subjt:  KLCSLCSSVA-SLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQS

Q9C9F4 Putative zinc finger protein At1g681901.9e-0634.67Show/hide
Query:  MKKLCSLCSSVASLI-CESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQS-PTPWNGSGPKLVPTVALCHGC
        M+++C  C +  +++ C +D A+LC  CD+KVH+AN +  +H+R ++C  C++ P        K+     LCHGC
Subjt:  MKKLCSLCSSVASLI-CESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQS-PTPWNGSGPKLVPTVALCHGC

Q9LJB7 B-box zinc finger protein 322.2e-0737.5Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKL--VPTVALCHGCVRRRVSEEGCASS
        M   C LC + A L C +D A LC  CD+K HA+N +  +H R ++C  C+S T    SGP L   P    C        S   C SS
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKL--VPTVALCHGCVRRRVSEEGCASS

Q9SYM2 B-box zinc finger protein 221.1e-0642.62Show/hide
Query:  MKKLCSLCSSV-ASLICESDEASLCWGCDSKVHAANIIVNKHVRVLV---------CHVCQ
        MK  C++C +  A+++C +DEA+LCW CD K+HAAN +  KH RV +         C +CQ
Subjt:  MKKLCSLCSSV-ASLICESDEASLCWGCDSKVHAANIIVNKHVRVLV---------CHVCQ

Arabidopsis top hitse value%identityAlignment
AT1G78600.1 light-regulated zinc finger protein 17.8e-0842.62Show/hide
Query:  MKKLCSLCSSV-ASLICESDEASLCWGCDSKVHAANIIVNKHVRVLV---------CHVCQ
        MK  C++C +  A+++C +DEA+LCW CD K+HAAN +  KH RV +         C +CQ
Subjt:  MKKLCSLCSSV-ASLICESDEASLCWGCDSKVHAANIIVNKHVRVLV---------CHVCQ

AT3G21150.1 B-box 321.6e-0837.5Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKL--VPTVALCHGCVRRRVSEEGCASS
        M   C LC + A L C +D A LC  CD+K HA+N +  +H R ++C  C+S T    SGP L   P    C        S   C SS
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKL--VPTVALCHGCVRRRVSEEGCASS

AT4G27310.1 B-box type zinc finger family protein7.3e-2248.45Show/hide
Query:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRRRVSEEG----CASSNNGAHEL
        M K C LC+ VA + CESD+ASLCW CD KVH AN +V KH R L+C  CQS TPW  +G +L PT ++C  CV  + +  G      S N G  E+
Subjt:  MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRRRVSEEG----CASSNNGAHEL

AT5G24930.1 CONSTANS-like 47.1e-0954Show/hide
Query:  KLCSLC-SSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQ
        KLC  C S+ A+L C  D A LC  CDSKVHAAN + ++H RV +C VC+
Subjt:  KLCSLC-SSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQ

AT5G54470.1 B-box type zinc finger family protein6.6e-2341.35Show/hide
Query:  KKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRRRVS--------------EEGCASSN
        KK C LC  VA + CESD+ASLCW CD KVH AN +V KH+R L+C  CQS TPW  SG  L PTV++C  C+ R+ +              EE     N
Subjt:  KKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRRRVS--------------EEGCASSN

Query:  NGA-------------HELQIQVVPSYSNSQKP
        +GA              E++ QVVP+    + P
Subjt:  NGA-------------HELQIQVVPSYSNSQKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTGTGCTCGCTGTGCTCGAGCGTGGCGAGTCTTATTTGCGAATCGGACGAAGCGAGCCTATGTTGGGGCTGCGATTCCAAGGTCCATGCAGCCAATATTAT
AGTAAACAAGCATGTTAGGGTTTTGGTGTGCCATGTTTGCCAATCTCCCACACCTTGGAATGGGTCTGGACCCAAGCTCGTGCCCACGGTTGCTCTTTGCCATGGATGTG
TTCGAAGGCGAGTGAGTGAGGAAGGATGTGCGAGCTCTAATAATGGCGCCCATGAGTTGCAAATTCAAGTGGTTCCATCTTACTCTAATTCTCAAAAGCCAAAGAAATTA
AGGAAGCGCTGTTGTGTAGACTATAAACATTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTCTAAGTTTGTAGGTTTTATATAAACCTGTGGATCAAACACATGGGATCAAAAAAATGAAGAAATTGTGCTCGCTGTGCTCGAGCGTGGCGAGTCTTATTTGCGAA
TCGGACGAAGCGAGCCTATGTTGGGGCTGCGATTCCAAGGTCCATGCAGCCAATATTATAGTAAACAAGCATGTTAGGGTTTTGGTGTGCCATGTTTGCCAATCTCCCAC
ACCTTGGAATGGGTCTGGACCCAAGCTCGTGCCCACGGTTGCTCTTTGCCATGGATGTGTTCGAAGGCGAGTGAGTGAGGAAGGATGTGCGAGCTCTAATAATGGCGCCC
ATGAGTTGCAAATTCAAGTGGTTCCATCTTACTCTAATTCTCAAAAGCCAAAGAAATTAAGGAAGCGCTGTTGTGTAGACTATAAACATTGA
Protein sequenceShow/hide protein sequence
MKKLCSLCSSVASLICESDEASLCWGCDSKVHAANIIVNKHVRVLVCHVCQSPTPWNGSGPKLVPTVALCHGCVRRRVSEEGCASSNNGAHELQIQVVPSYSNSQKPKKL
RKRCCVDYKH