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Sed0009193 (gene) of Chayote v1 genome

Gene IDSed0009193
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF3464)
Genome locationLG13:766177..767122
RNA-Seq ExpressionSed0009193
SyntenySed0009193
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021855 - PAM68-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574203.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6068.62Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN-----GGDDDDEIPEAVAKRIIT
        MKALVCSF   LH SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + AKD E+ A KK SGQ N     GGDDDDEIPEAVAKRIIT
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN-----GGDDDDEIPEAVAKRIIT

Query:  RILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
        RIL FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  RILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
KAG7013265.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-5867.74Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI
        MKALVCSF   L  SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + AKD E+ A KK SGQ N   GG  DDEIPEAVAKRIITRI
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI

Query:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
        L FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]1.5e-6069.35Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI
        MKALVCSF   LH SKPPPWK Q ++I+ S T  NL+I T+TSR QIQ NAKGF G+ + AKD E+ A KK SGQ N   GG DDDEIPEAVAKRIITRI
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI

Query:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
        L FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
XP_022968628.1 uncharacterized protein PAM68-like [Cucurbita maxima]3.1e-5868.11Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRIL
        MKALVCSF   L  SKPPPWK Q ++I+ S T  NL++ T TSR QIQ NAKGF G+ + AKD E+ A KKLS Q N   G DDDEIPEAVAKRIITRIL
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRIL

Query:  TFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
         FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  TFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]8.3e-5967.91Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN----GGDDDDEIPEAVAKRIITR
        MKALVCSF   L  SKPPPWK Q ++I+ S    NL+I T+TSR QIQ NAKGF G+ + AKD E+ A KK SGQ N    GG DDDEIPEAVAKRIITR
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN----GGDDDDEIPEAVAKRIITR

Query:  ILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
        IL FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  ILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
TrEMBL top hitse value%identityAlignment
A0A1S3AZ57 uncharacterized protein PAM68-like5.1e-5461.75Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFV
        MK+  CSF Q L   KPPP   +T  IN S    NL   T TSR Q+Q NAKGF G+         AAK LSGQ N  DDDDEIPEAV  RIITRIL FV
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFV

Query:  GAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
        G P+A GVTLLKI +AIKE  +W+VPIWVPF T F+TFGAS +GIAYG LS  LDPE++GS+ GWE+ +KNWVEMWKEEDE +
Subjt:  GAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein5.1e-5461.75Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFV
        MK+  CSF Q L   KPPP   +T  IN S    NL   T TSR Q+Q NAKGF G+         AAK LSGQ N  DDDDEIPEAV  RIITRIL FV
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFV

Query:  GAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
        G P+A GVTLLKI +AIKE  +W+VPIWVPF T F+TFGAS +GIAYG LS  LDPE++GS+ GWE+ +KNWVEMWKEEDE +
Subjt:  GAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
A0A6J1CGP3 uncharacterized protein PAM68-like1.2e-5562.5Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTN-GGDDDDEIPEAVAKRIITRILTF
        MKAL+CS+ Q LH S+PPPWK + ++IN S    NL   ++ +R  ++ NAKGF G         AAA+K+SGQ N   DDDDEI EAV+ RIITRIL F
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTN-GGDDDDEIPEAVAKRIITRILTF

Query:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
        VG P+A GV LLKI E IKE  VW+VPIW+PFLT F+TFGAS +GIAYG LSA LDPE+EGSLFGWE+ +KNWVEMWKEEDEA+
Subjt:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAA
A0A6J1FZC0 uncharacterized protein PAM68-like7.3e-6169.35Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI
        MKALVCSF   LH SKPPPWK Q ++I+ S T  NL+I T+TSR QIQ NAKGF G+ + AKD E+ A KK SGQ N   GG DDDEIPEAVAKRIITRI
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTN---GGDDDDEIPEAVAKRIITRI

Query:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
        L FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  LTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
A0A6J1HYL3 uncharacterized protein PAM68-like1.5e-5868.11Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRIL
        MKALVCSF   L  SKPPPWK Q ++I+ S T  NL++ T TSR QIQ NAKGF G+ + AKD E+ A KKLS Q N   G DDDEIPEAVAKRIITRIL
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGN-SPAKDTESAAAKKLSGQTNG--GDDDDEIPEAVAKRIITRIL

Query:  TFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
         FVG P+A GVTL+KILEA+ E  +W VPIW+PFLTIF+TFGAS +GIAYG LS  LDPE+EG+LFGW++ +KNWVEMWKEEDEA
Subjt:  TFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEA
SwissProt top hitse value%identityAlignment
O49668 Protein PAM68, chloroplastic4.8e-1729.47Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP------NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE-
        M ++ CSF    HR           Q ++          S+ P ++    +   ++I P      + KGF    P K T+ +   K   Q++  DDD++ 
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP------NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE-

Query:  -------------IPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEK
                     IPE V  R+I+R+   VG PL +G+        +K     +VP WVPF+  FV FG +  G++YG +S+  DP  EGSL GW + +K
Subjt:  -------------IPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEK

Query:  NWVEMWK
        NW   W+
Subjt:  NWVEMWK
Q9LTD9 Uncharacterized protein PAM68-like1.9e-2942.22Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTF
        M+AL+CS     HR  P    ++T     S  P  L    K    +++    KGF          S  ++K        +DD  IP+ V +R++ RI+  
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTF

Query:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE
        VG PL LGV +LK+LE +K+  VW+VP+WVP+LT  VTFG+SALGIAYG+LS  LDP +  SLFG ++ ++NWVEMWKE+
Subjt:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE
Arabidopsis top hitse value%identityAlignment
AT4G19100.1 Protein of unknown function (DUF3464)3.4e-1829.47Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP------NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE-
        M ++ CSF    HR           Q ++          S+ P ++    +   ++I P      + KGF    P K T+ +   K   Q++  DDD++ 
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINA----------SKTPNNLKIPTKTSRAQIQP------NAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDE-

Query:  -------------IPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEK
                     IPE V  R+I+R+   VG PL +G+        +K     +VP WVPF+  FV FG +  G++YG +S+  DP  EGSL GW + +K
Subjt:  -------------IPEAVAKRIITRILTFVGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEK

Query:  NWVEMWK
        NW   W+
Subjt:  NWVEMWK
AT5G52780.1 Protein of unknown function (DUF3464)1.3e-3042.22Show/hide
Query:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTF
        M+AL+CS     HR  P    ++T     S  P  L    K    +++    KGF          S  ++K        +DD  IP+ V +R++ RI+  
Subjt:  MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTS-RAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTF

Query:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE
        VG PL LGV +LK+LE +K+  VW+VP+WVP+LT  VTFG+SALGIAYG+LS  LDP +  SLFG ++ ++NWVEMWKE+
Subjt:  VGAPLALGVTLLKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTCTGGTGTGTTCCTTTCACCAACCTCTCCACCGCTCAAAACCACCGCCATGGAAGAATCAAACAAACCAAATCAACGCCTCGAAAACCCCAAACAATCTCAA
AATTCCCACAAAAACATCCCGAGCCCAAATCCAACCAAACGCCAAAGGCTTCCCCGGTAATTCTCCGGCGAAAGACACAGAATCCGCCGCCGCGAAAAAGCTCTCCGGCC
AAACCAACGGCGGCGACGACGACGACGAAATTCCAGAGGCCGTAGCGAAGAGGATCATAACGAGGATCTTGACGTTCGTGGGAGCTCCGTTAGCATTGGGCGTTACATTG
CTGAAGATTTTGGAGGCGATTAAAGAGAACGGCGTTTGGGAAGTGCCGATTTGGGTGCCGTTTTTGACGATTTTTGTGACGTTTGGCGCTTCGGCGTTGGGGATTGCTTA
TGGGGCTTTGTCGGCGTGTTTGGATCCGGAGGAAGAAGGTAGCCTGTTTGGATGGGAGCAAGTGGAGAAGAATTGGGTGGAGATGTGGAAGGAGGAAGATGAAGCTGCCA
ATCGCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCATTGATATTATAAAAAAATCTAAATAATATGAAAAATATATTTTTAGGATGATGAAAAATGAAAACTGAAACACCACCGTCCACCTCACAAAAAAGGTTCTTCGGA
TAAGATTTCCGGCGATAAAACAAAACAAACAGAACCAAAACCAAAATCAAAGCCGCCATGAAAGCTCTGGTGTGTTCCTTTCACCAACCTCTCCACCGCTCAAAACCACC
GCCATGGAAGAATCAAACAAACCAAATCAACGCCTCGAAAACCCCAAACAATCTCAAAATTCCCACAAAAACATCCCGAGCCCAAATCCAACCAAACGCCAAAGGCTTCC
CCGGTAATTCTCCGGCGAAAGACACAGAATCCGCCGCCGCGAAAAAGCTCTCCGGCCAAACCAACGGCGGCGACGACGACGACGAAATTCCAGAGGCCGTAGCGAAGAGG
ATCATAACGAGGATCTTGACGTTCGTGGGAGCTCCGTTAGCATTGGGCGTTACATTGCTGAAGATTTTGGAGGCGATTAAAGAGAACGGCGTTTGGGAAGTGCCGATTTG
GGTGCCGTTTTTGACGATTTTTGTGACGTTTGGCGCTTCGGCGTTGGGGATTGCTTATGGGGCTTTGTCGGCGTGTTTGGATCCGGAGGAAGAAGGTAGCCTGTTTGGAT
GGGAGCAAGTGGAGAAGAATTGGGTGGAGATGTGGAAGGAGGAAGATGAAGCTGCCAATCGCTGAGGAAAGTAAAGGAAACGAAACTAATTGGGTCTGTTTGGTTACGAG
TGTATCGTATCCAGAATAGCTTTCCTCCGTTTAATCACTGTGTTTTGTGATTATTATTTCTCACATATATGAACTGTGTTTGGTTAATCGATTAAGAGTTTTTAGCACTT
TTTTTAACACATGGGTTAGTGTTCGGGTTATATATATATATTTGAGTACATATTGATAGAGGGGGA
Protein sequenceShow/hide protein sequence
MKALVCSFHQPLHRSKPPPWKNQTNQINASKTPNNLKIPTKTSRAQIQPNAKGFPGNSPAKDTESAAAKKLSGQTNGGDDDDEIPEAVAKRIITRILTFVGAPLALGVTL
LKILEAIKENGVWEVPIWVPFLTIFVTFGASALGIAYGALSACLDPEEEGSLFGWEQVEKNWVEMWKEEDEAANR