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Sed0009213 (gene) of Chayote v1 genome

Gene IDSed0009213
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG10:28122366..28122897
RNA-Seq ExpressionSed0009213
SyntenySed0009213
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152801.1 probable calcium-binding protein CML11 [Cucumis sativus]4.8e-4259.06Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQ---VFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLD---GEPPSSNVQLSRET
        MS S LQAWA++EA+ LIK+YD+NGDG L KEEL   L+  RG+TQ   + N   S  PK   N A K+  +     K+Q LD   G    SNV LSRE 
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQ---VFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLD---GEPPSSNVQLSRET

Query:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        IKEIFKYHD++KDGFL+I+ELTKAF+ MGSI+P  KA YA+AYAD D DGL+SEAEL KLIDYA K I KK
Subjt:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

XP_022951134.1 uncharacterized protein LOC111454074 isoform X1 [Cucurbita moschata]3.9e-4460.11Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN
        M +SK Q  AEDEA+RL+K+YD NGDG L KEEL   L K RG+TQ+ NNQ   S  PKA  N AHK   + H K K+Q            LDGE   S 
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF+F+GSILP  KAHYA+AYAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

XP_023002688.1 calcium-binding protein H-like isoform X1 [Cucurbita maxima]4.3e-4358.86Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESM--TPKAYTNFAHKLECSYHKKSKRQSLD-GEPPS--------SNVQ
        MS+SK Q WAEDEA+RL+K+YD NGDG L KEEL   L K RG+ Q+ NNQ  +   PKA  N AH+   + H K K+Q  D G+  S        S ++
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESM--TPKAYTNFAHKLECSYHKKSKRQSLD-GEPPS--------SNVQ

Query:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINK
        LSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSILP  KAHYA+AYAD ++DGLISE EL KLIDYA+K INK
Subjt:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINK

XP_023538534.1 putative calmodulin-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-4459.55Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN
        M +SK Q WAEDEA+RL+K+YD NGDG L KEEL   L K RG+TQ+ NNQ   S  PKA  N  HK   + H K K+Q            LDGE   S 
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSILP  KAHYA+ YAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]8.2e-4254.8Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ---ESMTPKAYTNFAHKLECSYHKKSKRQSLDG---------EPPSSNV
        MS S+LQAWAE+EA+ LIK+YD+NGDG L KEEL   L  T  +TQ+ N +     M PK   N  HKL  + H   K+Q  D          +   SN+
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ---ESMTPKAYTNFAHKLECSYHKKSKRQSLDG---------EPPSSNV

Query:  QLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
          SRE IKEIFKYHD++KDGFLNI+ELTK F  +GS++P +KAHYA+AYADAD DGLISE EL +LIDY  K I KK
Subjt:  QLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRC8 Uncharacterized protein2.3e-4259.06Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQ---VFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLD---GEPPSSNVQLSRET
        MS S LQAWA++EA+ LIK+YD+NGDG L KEEL   L+  RG+TQ   + N   S  PK   N A K+  +     K+Q LD   G    SNV LSRE 
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQ---VFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLD---GEPPSSNVQLSRET

Query:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        IKEIFKYHD++KDGFL+I+ELTKAF+ MGSI+P  KA YA+AYAD D DGL+SEAEL KLIDYA K I KK
Subjt:  IKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

A0A6J1GHU7 uncharacterized protein LOC111454074 isoform X11.9e-4460.11Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN
        M +SK Q  AEDEA+RL+K+YD NGDG L KEEL   L K RG+TQ+ NNQ   S  PKA  N AHK   + H K K+Q            LDGE   S 
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQ--ESMTPKAYTNFAHKLECSYHKKSKRQ-----------SLDGEPPSSN

Query:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        +QLSRE +KEIFK HD++KDGFL+IKE+TKAF+F+GSILP  KAHYA+AYAD ++DGLISE EL KLIDYA+K INKK
Subjt:  VQLSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

A0A6J1KK82 probable calcium-binding protein CML142.8e-4055.68Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQE--SMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPS---------SNVQ
        M  S LQ WAE+EA+ L+K+YD+NGDG L K+EL   L+  RG+TQ+ NNQ   S  PK   N AHKL  + H   K Q  +    S         S+V+
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQE--SMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPS---------SNVQ

Query:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        LSRE IK+IFKY+D+DKDGFLNI E+TKAF+F+GSI P +KA YA+++ADA+NDG+ISEAEL KLIDYA K I KK
Subjt:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

A0A6J1KM01 probable calcium-binding protein CML115.7e-4156.57Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQV-FNNQESMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPS---------SNVQL
        MS S LQ WAE+EA+ L+K+YDKNGDG L KEEL   L+  RG+TQ+ +    S  PK     AHKL  + H   K Q  D    S         SNV L
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQV-FNNQESMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPS---------SNVQL

Query:  SRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK
        SRE IK+IFKY+D+DKDGFLNI+E+TKAF+F+GSI P +KA YA+ +ADA+NDGLISE EL KLIDYA K I KK
Subjt:  SRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK

A0A6J1KUA8 calcium-binding protein H-like isoform X12.1e-4358.86Show/hide
Query:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESM--TPKAYTNFAHKLECSYHKKSKRQSLD-GEPPS--------SNVQ
        MS+SK Q WAEDEA+RL+K+YD NGDG L KEEL   L K RG+ Q+ NNQ  +   PKA  N AH+   + H K K+Q  D G+  S        S ++
Subjt:  MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESM--TPKAYTNFAHKLECSYHKKSKRQSLD-GEPPS--------SNVQ

Query:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINK
        LSRE +KEIFK HD++KDGFL+IKE+TKAF F+GSILP  KAHYA+AYAD ++DGLISE EL KLIDYA+K INK
Subjt:  LSRETIKEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43290.1 Calcium-binding EF-hand family protein1.1e-0425.61Show/hide
Query:  SSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESMTPKAYTNFAHKLECS------YHKKSKRQSLDGEPPSSNVQLSRETI
        SS+  +     E  R+ + +DKNGDG + KEELN  L+         N    +  K  T   HK++ +        +     S   +   ++ +   E +
Subjt:  SSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESMTPKAYTNFAHKLECS------YHKKSKRQSLDGEPPSSNVQLSRETI

Query:  KEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFK----AHYALAYADADNDGLISEAELHKLI
        K+ F   D D DGF+ ++EL    A +G  L   K        +   DAD DG ++  E  +++
Subjt:  KEIFKYHDTDKDGFLNIKELTKAFAFMGSILPHFK----AHYALAYADADNDGLISEAELHKLI

AT3G10190.1 Calcium-binding EF-hand family protein7.2e-0421.77Show/hide
Query:  EAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFLNI
        E  +  K  D++ DG + + +L  LL +           + +T +       +++C      + + L     S +       +KE F++ D D+DG ++ 
Subjt:  EAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFLNI

Query:  KELTKAFAFMGS---ILPHFKAHYALAYADADNDGLISEAELHKLID
         EL + F+ +G     L   K    +A  D D DG +   E  +++D
Subjt:  KELTKAFAFMGS---ILPHFKAHYALAYADADNDGLISEAELHKLID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCCAAACTCCAAGCATGGGCTGAAGATGAAGCGCATCGACTCATCAAGGAGTATGATAAAAATGGCGATGGTTGTCTAGATAAAGAAGAGCTGAACTTCCT
CCTCCAAAAAACTCGAGGTGCAACACAAGTTTTCAACAATCAAGAATCTATGACTCCAAAAGCTTATACCAATTTTGCGCACAAGCTAGAGTGTAGCTATCATAAGAAAT
CCAAAAGGCAGTCACTTGATGGAGAGCCACCGTCATCTAATGTTCAACTTAGTCGAGAGACAATTAAGGAGATTTTCAAATACCATGATACCGACAAGGATGGTTTTCTC
AACATTAAAGAGTTAACAAAAGCTTTTGCCTTTATGGGCTCAATTCTTCCTCACTTTAAAGCTCATTATGCTTTGGCTTATGCTGATGCTGATAACGATGGTCTTATCAG
TGAGGCTGAGCTTCACAAACTTATAGATTATGCAACTAAAACCATCAACAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
AAACGATTCATCCACATAGCCTTAGTTTAACATAATGTCTTCCTCCAAACTCCAAGCATGGGCTGAAGATGAAGCGCATCGACTCATCAAGGAGTATGATAAAAATGGCG
ATGGTTGTCTAGATAAAGAAGAGCTGAACTTCCTCCTCCAAAAAACTCGAGGTGCAACACAAGTTTTCAACAATCAAGAATCTATGACTCCAAAAGCTTATACCAATTTT
GCGCACAAGCTAGAGTGTAGCTATCATAAGAAATCCAAAAGGCAGTCACTTGATGGAGAGCCACCGTCATCTAATGTTCAACTTAGTCGAGAGACAATTAAGGAGATTTT
CAAATACCATGATACCGACAAGGATGGTTTTCTCAACATTAAAGAGTTAACAAAAGCTTTTGCCTTTATGGGCTCAATTCTTCCTCACTTTAAAGCTCATTATGCTTTGG
CTTATGCTGATGCTGATAACGATGGTCTTATCAGTGAGGCTGAGCTTCACAAACTTATAGATTATGCAACTAAAACCATCAACAAGAAATGA
Protein sequenceShow/hide protein sequence
MSSSKLQAWAEDEAHRLIKEYDKNGDGCLDKEELNFLLQKTRGATQVFNNQESMTPKAYTNFAHKLECSYHKKSKRQSLDGEPPSSNVQLSRETIKEIFKYHDTDKDGFL
NIKELTKAFAFMGSILPHFKAHYALAYADADNDGLISEAELHKLIDYATKTINKK