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Sed0009226 (gene) of Chayote v1 genome

Gene IDSed0009226
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:4385087..4388187
RNA-Seq ExpressionSed0009226
SyntenySed0009226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604438.1 hypothetical protein SDJN03_05047, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1459.79Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        M FTTT+ F+FLL TP     S   GGSE NGG+     S   VYEIDYRGPETHSSHIS  P HHSHGRP I H +H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

XP_022925989.1 uncharacterized protein LOC111433241 [Cucurbita moschata]6.8e-1560.82Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        MSFTTT+ F+FLL TP     S   GGSE NGG+     S   VYEIDYRGPETHSSHIS  P HHSHGRP I H +H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

XP_022979166.1 uncharacterized protein LOC111478885 [Cucurbita maxima]3.4e-1461.86Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        MSFTTT+ FLFLL TP     S   GGSE NGGL  S      VYEIDYRGPETHSSHIS  P H SHGRP I H  H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

XP_023543089.1 uncharacterized protein LOC111803061 [Cucurbita pepo subsp. pepo]3.1e-1258.76Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        MSF  T+ FLFLL TP     S   GGSE NGG+     S   VYEIDYRGPETHSSHIS  P H SHGRP I H  H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

XP_038881428.1 uncharacterized protein LOC120072958 [Benincasa hispida]1.6e-1159.62Show/hide
Query:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINH---QQHKPTHNPTTPN--LIKA
        MEM+SF  T+ FLFLLATP S SS K  GGSE       S SS   VYEIDYRGPETHSSHISP PD HSHGRP INH    Q +P   P  P+   +K 
Subjt:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINH---QQHKPTHNPTTPN--LIKA

Query:  SKVG
        SK G
Subjt:  SKVG

TrEMBL top hitse value%identityAlignment
A0A0A0KIB6 Uncharacterized protein1.7e-0849.45Show/hide
Query:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPN
        ME+++F TT+ FLFLLA   S SSSK       NGG+ D       VYEIDYRGPETHSSH    PDH    RP I H        P  PN
Subjt:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPN

A0A5A7U1B9 Putative transmembrane protein2.7e-0950.54Show/hide
Query:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSS------LGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNP
        ME+++F TT+ FLFLLATP   SS   GG SE N G +D   S         VYEIDYRGPETHSSH    PDH    RP I H  H     P
Subjt:  MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSS------LGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNP

A0A6J1CPX6 uncharacterized protein LOC1110136521.1e-1058.51Show/hide
Query:  TILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKAS--KVGA
        T  FLFL+    S SSSK  GGSE NG +  S      VYEIDYRGPETHSSH SP PDHHSHGRP I H Q K      +PN  K S  KVGA
Subjt:  TILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKAS--KVGA

A0A6J1EDR4 uncharacterized protein LOC1114332413.3e-1560.82Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        MSFTTT+ F+FLL TP     S   GGSE NGG+     S   VYEIDYRGPETHSSHIS  P HHSHGRP I H +H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

A0A6J1IQ06 uncharacterized protein LOC1114788851.6e-1461.86Show/hide
Query:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA
        MSFTTT+ FLFLL TP     S   GGSE NGGL  S      VYEIDYRGPETHSSHIS  P H SHGRP I H  H P H P  P  +K SKVGA
Subjt:  MSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGATGAGCTTCACCACCACAATCTTGTTCCTTTTCCTCCTTGCCACCCCTTGTTCATTTTCTTCTTCTAAATTAGGTGGGGGATCTGAATTAAATGGAGGATT
AGTGGATTCTCCATCATCATTAGGGGGTGTTTATGAAATAGATTACAGAGGACCAGAAACTCATTCATCTCATATTTCTCCACTACCTGATCATCACTCCCATGGAAGAC
CAAGGATTAATCACCAACAGCATAAACCTACTCACAACCCTACTACTCCAAATTTAATTAAGGCAAGCAAGGTTGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAAGAAAAGAAAAGAAGAAATTGCCCCTTTTTTATATCAAATATTACCCCCTTTTTAATTTTCCATCCTTCTTCTTCTTCTTAACTATTTCATCCTAATTTT
CTCCTCCATCTTCATCCTTCTATGACCCAAATTACAAAAAACAAAAATTAGGGTTTTGAAAAAGTATTCTTCAAATTGTCTTCCATGGAGATGATGAGCTTCACCACCAC
AATCTTGTTCCTTTTCCTCCTTGCCACCCCTTGTTCATTTTCTTCTTCTAAATTAGGTGGGGGATCTGAATTAAATGGAGGATTAGTGGATTCTCCATCATCATTAGGGG
GTGTTTATGAAATAGATTACAGAGGACCAGAAACTCATTCATCTCATATTTCTCCACTACCTGATCATCACTCCCATGGAAGACCAAGGATTAATCACCAACAGCATAAA
CCTACTCACAACCCTACTACTCCAAATTTAATTAAGGCAAGCAAGGTTGGTGCATGATCGATTGAAGTTTTAAAAGTATAGTTAATTTAAATTGAAAATTAAATCAATTT
AGTGATCCTAGCTGAGAATTAATTTTCTTCTTCTTCTTTTTTAAGTAATTTTTGTACAAATTATGGTTGCATAAAGCATCTTTTGTGTATTTGGAATTTGAACCGTTCTA
TCTTATAAAGATTAAGAAAATGTCAATTTTCTAGTAGTCATATATATGTGAG
Protein sequenceShow/hide protein sequence
MEMMSFTTTILFLFLLATPCSFSSSKLGGGSELNGGLVDSPSSLGGVYEIDYRGPETHSSHISPLPDHHSHGRPRINHQQHKPTHNPTTPNLIKASKVGA