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Sed0009238 (gene) of Chayote v1 genome

Gene IDSed0009238
OrganismSechium edule (Chayote v1)
DescriptionR3 MYB transcription factor
Genome locationLG01:64212285..64213874
RNA-Seq ExpressionSed0009238
SyntenySed0009238
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]7.7e-3691.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQKQAKI+ L+SEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

XP_022958649.1 transcription factor TRY-like [Cucurbita moschata]1.1e-3491.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHR Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE FA RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]6.5e-3591.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHR+Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE FA RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

XP_031742154.1 transcription factor TRY [Cucumis sativus]1.7e-3591.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQK AKI+ LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

XP_038875738.1 transcription factor TRY [Benincasa hispida]1.6e-3693.9Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQKQAKIT LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY3.7e-3691.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQKQAKI+ L+SEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

A0A5D3C2B2 Transcription factor TRY3.7e-3691.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQKQAKI+ L+SEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

A0A6J1H5Q3 transcription factor TRY-like5.4e-3591.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHR Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE FA RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

A0A6J1KAI4 transcription factor TRY-like3.2e-3591.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHR+Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE FA RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

I6NF75 R3 MYB transcription factor8.3e-3691.46Show/hide
Query:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG
        MDNHRHQK AKI+ LESEEVSSTRWQFITMTAQEEDLIHRMHKLIG+RWDLIAGRIPGRKPEEIERYWIMTHLE F +RRRG
Subjt:  MDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL28.1e-2052.87Show/hide
Query:  TNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        TN  R++   R +KQ+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+G+RWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  TNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

O22059 Transcription factor CPC1.5e-2162.34Show/hide
Query:  RHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+G+RW+LIAGRIPGR PEEIERYW+M H  VFA RRR
Subjt:  RHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

Q84RD1 MYB-like transcription factor ETC24.7e-2060.53Show/hide
Query:  KQAKIT--QLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        +Q K T  + +SEEVSS  W+FI+MT QEEDLI RM++L+G RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  KQAKIT--QLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

Q8GV05 Transcription factor TRY2.2e-2565.85Show/hide
Query:  NMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        N D  R +KQ KI   +SEEVSS  W+FI MT QEEDLI RM++L+G+RWDLIAGR+PGR+PEEIERYWIM + E FA +RR
Subjt:  NMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

Q9M157 MYB-like transcription factor ETC35.2e-1960.27Show/hide
Query:  MDNHRHQKQAK---ITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIM
        MDNHR  KQ K   I    SEEVSS  W+ + M+ +EEDL+ RMHKL+G+RW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRHQKQAK---ITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein3.4e-2160.53Show/hide
Query:  KQAKIT--QLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        +Q K T  + +SEEVSS  W+FI+MT QEEDLI RM++L+G RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  KQAKIT--QLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

AT2G30424.1 Homeodomain-like superfamily protein5.7e-2152.87Show/hide
Query:  TNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        TN  R++   R +KQ+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+G+RWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  TNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

AT2G46410.1 Homeodomain-like superfamily protein1.0e-2262.34Show/hide
Query:  RHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+G+RW+LIAGRIPGR PEEIERYW+M H  VFA RRR
Subjt:  RHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR

AT4G01060.3 CAPRICE-like MYB33.7e-2060.27Show/hide
Query:  MDNHRHQKQAK---ITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIM
        MDNHR  KQ K   I    SEEVSS  W+ + M+ +EEDL+ RMHKL+G+RW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRHQKQAK---ITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein1.6e-2665.85Show/hide
Query:  NMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
        N D  R +KQ KI   +SEEVSS  W+FI MT QEEDLI RM++L+G+RWDLIAGR+PGR+PEEIERYWIM + E FA +RR
Subjt:  NMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCGAAAAGACTCCAATCCAAAAGAATAAGACCAAGATCGCTCGGTCTCTCTATCTCAAGTTCACTAACCTTTGGAGAAACATGGACAATCATCGTCATCAAAA
ACAAGCTAAAATCACTCAACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGA
TTGGAGAAAGGTGGGATCTAATAGCAGGTAGAATTCCAGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGTGTTTGCCCAAAGAAGAAGA
GGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATCGAAAAGACTCCAATCCAAAAGAATAAGACCAAGATCGCTCGGTCTCTCTATCTCAAGTTCACTAACCTTTGGAGAAACATGGACAATCATCGTCATCAAAA
ACAAGCTAAAATCACTCAACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGA
TTGGAGAAAGGTGGGATCTAATAGCAGGTAGAATTCCAGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGTGTTTGCCCAAAGAAGAAGA
GGATGA
Protein sequenceShow/hide protein sequence
MRIEKTPIQKNKTKIARSLYLKFTNLWRNMDNHRHQKQAKITQLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGERWDLIAGRIPGRKPEEIERYWIMTHLEVFAQRRR
G