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Sed0009241 (gene) of Chayote v1 genome

Gene IDSed0009241
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S30
Genome locationLG03:11721556..11722468
RNA-Seq ExpressionSed0009241
SyntenySed0009241
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006846 - Ribosomal protein S30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2953813.1 40s ribosomal s30 [Olea europaea subsp. europaea]2.2e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

ESR64610.1 hypothetical protein CICLE_v10009868mg [Citrus clementina]2.2e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

KAG6599498.1 40S ribosomal protein S30, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

KAG7021908.1 40S ribosomal protein S30, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

PIA64528.1 hypothetical protein AQUCO_00100184v1, partial [Aquilegia coerulea]2.2e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

TrEMBL top hitse value%identityAlignment
A0A368PSS0 40S ribosomal protein S301.1e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

A0A6J1KXK5 40S ribosomal protein S301.1e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

A0A7I8KYK5 40S ribosomal protein S301.1e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

C5XV41 40S ribosomal protein S301.1e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

M5WRX6 40S ribosomal protein S301.1e-2498.39Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

SwissProt top hitse value%identityAlignment
P49689 40S ribosomal protein S302.5e-2695.16Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

P62860 40S ribosomal protein S304.2e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62861 40S ribosomal protein S304.2e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62862 40S ribosomal protein S304.2e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62866 40S ribosomal protein S304.2e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

Arabidopsis top hitse value%identityAlignment
AT2G19750.1 Ribosomal protein S30 family protein1.7e-2795.16Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

AT4G29390.1 Ribosomal protein S30 family protein1.7e-2795.16Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK

AT5G56670.1 Ribosomal protein S30 family protein1.7e-2795.16Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSS+K
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGTTCACGGATCATTGGCTCGTGCGGGGAAGGTGAGAGGCCAGACTCCTAAAGTCGCTAAGCAGGACAAGAAGAAGAAGCCCCGAGGACGTGCCCACAAACG
GATGCAATACAATCGCCGATTCGTCACTGCCGTTGTTGGCTTCGGCAAGAAGAGAGGACCAAACTCCTCCGACAAGTAA
mRNA sequenceShow/hide mRNA sequence
TCAGGCATCTTCGTTCATAGTTTCAATCAGACGAAGCGCGCAAACCAAAAGACGATAATTGGGTCATCAGATTGGGCATGGGGAAGGTTCACGGATCATTGGCTCGTGCG
GGGAAGGTGAGAGGCCAGACTCCTAAAGTCGCTAAGCAGGACAAGAAGAAGAAGCCCCGAGGACGTGCCCACAAACGGATGCAATACAATCGCCGATTCGTCACTGCCGT
TGTTGGCTTCGGCAAGAAGAGAGGACCAAACTCCTCCGACAAGTAACACACTCGCATCTCTCAGTTTTTTTTTTTCTTTATATACTTTTGTTTGTGTTCTTCATTTTTGT
TATAACAAACAATCCGACATTTATCTGTGTTCTTTCTTTTAGAAGGTTCTTTTGTTAGTGTTCTTGATACCCCACAATGAGATTTTGAGTATTTCATAATTTTGTCAATA
ATATGGAGTGTGGATTTAATTATTACTTGCCTATAATAAATTAATTTTCTTACTAAATTGGCCTAATGATCAAGATGTTTTGAGAAGCCTCTGTTACATTATGATTTCGT
CATCAACGATTATGGTATTTAACCCCTTTTTGTTGGACGATTTATTTGTAGCTCTTTATAACCAATATTTTCATGATCTTTAAAGATTGGCCTAACTTGTTTCTTTATAG
TGTGGGTGATATGTGTGGGTTTTGTTGAGTCCATATGGGTGTTTCGTTGGTATAATTATGATATCGAGATCTTTGAAGACTCACTTGTG
Protein sequenceShow/hide protein sequence
MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSDK