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Sed0009243 (gene) of Chayote v1 genome

Gene IDSed0009243
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG11:11349585..11350485
RNA-Seq ExpressionSed0009243
SyntenySed0009243
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462513.1 PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]9.2e-5775.14Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY
        MATGKSYFSRSKFRFLP+GDG DH    +DA FDFDESDLFN   S  S E RR  SK+RISKR S    D GDRS T   AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR++ F+D D D + GDEFE+  R RVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_022964829.1 uncharacterized protein LOC111464817 [Cucurbita moschata]2.3e-5573.03Show/hide
Query:  MAT-GKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNE
        MAT G +YFSRSKFRFLP+ DG DHR T  D+VF+ DESDLFN   S+AS E RRS+SK+RISKR SA   D  DRS     AASLPVNIPDWSKILRNE
Subjt:  MAT-GKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNE

Query:  YTENRKNSFDDGD----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        Y ENR++ FDD D     DG GG +FEDG R RVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YTENRKNSFDDGD----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_022970343.1 uncharacterized protein LOC111469336 [Cucurbita maxima]2.0e-5673.03Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY
        MATG +YFSRSKFRFLP+ DG DHR T  D+VF+ DESDLFN   S+AS E RRS+SK+RISKR SA   D  DRS     AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR++ FDD D      DG GG +FEDG R RVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_023519114.1 uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo]1.6e-5673.03Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY
        MATG +YFSRSKFRFLP+ DG DHR T  D+VF+ DESDLFN   S+AS E RRS+SK+RISKR SA   D  DRS     AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR++ FDD D      DG GG +FEDG R RVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_038894808.1 uncharacterized protein LOC120083221 [Benincasa hispida]5.2e-6076.44Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY
        MATG+SYFSRSKFRFLP+GDG DH     DAVFDFDESDLFN   S  S E RR  +KTRISKR S  V D GDR+ T   AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDG-DSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR+++FDD  D DG+GGD+FE+G R RVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDG-DSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

TrEMBL top hitse value%identityAlignment
A0A0A0LSF7 Uncharacterized protein1.2e-5473.41Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY
        MATGKSYFSRSKFRFL  GDG DH     DA FDFDESDLFN   S  S E RR  SK+RISKR S    D GDRS T   AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         +NR++ F+D D D + GDE E+  R RVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A1S3CH53 uncharacterized protein LOC1035008464.4e-5775.14Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY
        MATGKSYFSRSKFRFLP+GDG DH    +DA FDFDESDLFN   S  S E RR  SK+RISKR S    D GDRS T   AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRSAT--GAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR++ F+D D D + GDEFE+  R RVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1FJG2 uncharacterized protein LOC1114444602.8e-5169.05Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTENRK
        MATGKSYFSRSKFRFLP+ +  +HR    D VF+ DESDLFNS     V    SKTRISK  SAKV D GD S T  A+LPVNIPDWSKILRNEY ENR+
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTENRK

Query:  NSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        + F++   + N GDE E+  R RVPPHEF+ARTR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Subjt:  NSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1HPB6 uncharacterized protein LOC1114648171.1e-5573.03Show/hide
Query:  MAT-GKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNE
        MAT G +YFSRSKFRFLP+ DG DHR T  D+VF+ DESDLFN   S+AS E RRS+SK+RISKR SA   D  DRS     AASLPVNIPDWSKILRNE
Subjt:  MAT-GKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNE

Query:  YTENRKNSFDDGD----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        Y ENR++ FDD D     DG GG +FEDG R RVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YTENRKNSFDDGD----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1I3L6 uncharacterized protein LOC1114693369.9e-5773.03Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY
        MATG +YFSRSKFRFLP+ DG DHR T  D+VF+ DESDLFN   S+AS E RRS+SK+RISKR SA   D  DRS     AASLPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDRS--ATGAASLPVNIPDWSKILRNEY

Query:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR++ FDD D      DG GG +FEDG R RVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  TENRKNSFDDGD-----SDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5849.6e-2848.26Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTEVRRSLSKTRI-SKRTSA-KVADGGDRSATGAASLPVNIPDWSKILRNEYTEN
        MAT K Y+ R   RF  +     H   T+D  F+ DE DLFN+ + +    S S   I S RT   +   GG  S   A+SLPVN+PDWSKIL +E    
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTEVRRSLSKTRI-SKRTSA-KVADGGDRSATGAASLPVNIPDWSKILRNEYTEN

Query:  RKNSFDDGDSDGNGGDEF--EDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        RK S    + +   GDE    +G+R RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Subjt:  RKNSFDDGDSDGNGGDEF--EDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT3G45210.1 Protein of unknown function, DUF5843.5e-3049.4Show/hide
Query:  ATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLF-NSAASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTENRK
        AT KSY+ R   RFLP+    +    T D+ F+FDESDL+ N + S E RR L  T   K + A V      + T A+SLP+N+ +WSKIL     ENRK
Subjt:  ATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLF-NSAASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTENRK

Query:  NSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        +  +D           +DG   ++PPHE+LA+TR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Subjt:  NSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT4G04630.1 Protein of unknown function, DUF5841.7e-1636.55Show/hide
Query:  DFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDR-----SATGAASLPVNIPDWSKILRNEYTENRKNSFDDGDSDGNGGDEFEDGSRSRVP
        +F E D+++      ++     + K+  S  +S+  +    R     S    +S P+N+PDWSK+  +  +  R +      +D    D+ ED     VP
Subjt:  DFDESDLFN---SAASTEVRRSLSKTRISKRTSAKVADGGDR-----SATGAASLPVNIPDWSKILRNEYTENRKNSFDDGDSDGNGGDEFEDGSRSRVP

Query:  PHEF----LARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF
        PHE+    LART+I+SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Subjt:  PHEF----LARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF

AT5G03230.1 Protein of unknown function, DUF5843.7e-3245.98Show/hide
Query:  MATGKSYFSRSKFRF-LPSGDGADHRLTTADAVFDFDESDLFNSA-----ASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNE
        MA+ K +F + K+ +  P  + +D      + VF+FDESD+ N        S + +RS+S +R+ +R   K  D G+R  T   SLPVNIPDWSKIL++E
Subjt:  MATGKSYFSRSKFRF-LPSGDGADHRLTTADAVFDFDESDLFNSA-----ASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNE

Query:  YTENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        Y        DD D D    D+  DG R  +PPHE+LAR R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Subjt:  YTENRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT5G60680.1 Protein of unknown function, DUF5841.4e-3953.8Show/hide
Query:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTE---VRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTE
        MATGKSY++R  +RFL  G       T +D+  +FDESDLFN   S      R+  S  R  K++S + +     SA  A+SLPVN+PDWSKILR EY +
Subjt:  MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTE---VRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTE

Query:  NRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        NR+ S +D D D    D+ EDG    +PPHEFLA+TR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Subjt:  NRKNSFDDGDSDGNGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGTAAGAGTTATTTCTCTCGCTCCAAGTTCCGGTTTCTTCCCTCCGGCGACGGCGCCGACCACCGCCTTACCACCGCCGACGCCGTCTTCGACTTCGACGA
GTCCGACCTCTTCAACTCCGCCGCCTCGACGGAGGTGCGGCGTTCGCTCTCCAAAACAAGAATCTCGAAGCGGACGTCGGCGAAGGTGGCGGACGGAGGAGATCGGTCCG
CGACGGGGGCGGCGTCGTTGCCGGTCAACATCCCGGACTGGTCGAAGATCCTGAGGAACGAGTACACCGAGAATCGGAAAAACAGCTTTGACGACGGCGACAGCGACGGC
AACGGCGGCGATGAGTTCGAGGACGGCAGCCGATCTAGGGTTCCGCCGCATGAATTCCTGGCGAGAACGAGAATCGCTTCGTTTTCCGTTCACGAAGGAATCGGAAGAAC
GTTGAAAGGGCGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAGAAAACTGGATTCGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAACAGAAGAGAAAACAGAGCATTTTCTTTTTTCTTAAAAAATTTCTCTTACCTTTTTCCTCCGATGGCGACTGGTAAGAGTTATTTCTCTCGCTCCAAGTTCCGGT
TTCTTCCCTCCGGCGACGGCGCCGACCACCGCCTTACCACCGCCGACGCCGTCTTCGACTTCGACGAGTCCGACCTCTTCAACTCCGCCGCCTCGACGGAGGTGCGGCGT
TCGCTCTCCAAAACAAGAATCTCGAAGCGGACGTCGGCGAAGGTGGCGGACGGAGGAGATCGGTCCGCGACGGGGGCGGCGTCGTTGCCGGTCAACATCCCGGACTGGTC
GAAGATCCTGAGGAACGAGTACACCGAGAATCGGAAAAACAGCTTTGACGACGGCGACAGCGACGGCAACGGCGGCGATGAGTTCGAGGACGGCAGCCGATCTAGGGTTC
CGCCGCATGAATTCCTGGCGAGAACGAGAATCGCTTCGTTTTCCGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGCGAGATCTGAGCAGAGTTCGAGATGCGATTTGG
CAGAAAACTGGATTCGAAGATTAATTCAATTCAATCGGACAAACACGAAGAACAATTTCGCCAAAATATTTTCCGAATATTCCTATAGAATATACGAATTCCTTCAATCC
ATCGAAAATTTTGATCGATTTCACTTCTGTTCATTTTTTCCGTTGCGCCGCCGCATCTGATCGGCGATTTTTTTATCTTGCCGATCATCGTTTTCATTTTCTGTTAATTC
GGAATATTTTGTATTTTGTGTTCCACGAGAAGGTTAAAAAAATATCTTATATATATTTTATTCATTATTCTTTTACGCGTGAAATTATTTTTTGGGAAATTTAGTACAAT
AATCAAATTTTACAAAATAAT
Protein sequenceShow/hide protein sequence
MATGKSYFSRSKFRFLPSGDGADHRLTTADAVFDFDESDLFNSAASTEVRRSLSKTRISKRTSAKVADGGDRSATGAASLPVNIPDWSKILRNEYTENRKNSFDDGDSDG
NGGDEFEDGSRSRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED