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Sed0009245 (gene) of Chayote v1 genome

Gene IDSed0009245
OrganismSechium edule (Chayote v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome locationLG01:21685669..21687923
RNA-Seq ExpressionSed0009245
SyntenySed0009245
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141282.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]3.2e-3889.36Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEF+NKDQNQ+Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
XP_008452624.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucumis melo]3.6e-3788.3Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEF++KDQNQ+Y  KDSKD +R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
XP_022159826.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 [Momordica charantia]6.1e-3787.23Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQG+EF+ KDQNQ+Y  KDS D++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
XP_022937244.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata]2.1e-3786.17Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME +NKDQNQ+Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
XP_022977146.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]2.7e-3786.17Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME +NKDQNQ Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
TrEMBL top hitse value%identityAlignment
A0A0A0L0F8 Uncharacterized protein1.6e-3889.36Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEF+NKDQNQ+Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
A0A1S3BVF8 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X11.7e-3788.3Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEF++KDQNQ+Y  KDSKD +R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
A0A6J1E543 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X13.0e-3787.23Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQG+EF+ KDQNQ+Y  KDS D++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
A0A6J1F9U6 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X11.0e-3786.17Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME +NKDQNQ+Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
A0A6J1IHM9 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X11.3e-3786.17Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
        MVL+NFNG GVGFGFG+GCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME +NKDQNQ Y  KDSKD++R S
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKS
SwissProt top hitse value%identityAlignment
Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic8.9e-3174.73Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E E  D+ +  V   SK+ T
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein6.3e-3274.73Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E E  D+ +  V   SK+ T
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT
AT1G27695.2 glycine-rich protein6.3e-3274.73Show/hide
Query:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT
        MVLS+F G GVGFGFGVGCGFGVGWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E E  D+ +  V   SK+ T
Subjt:  MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCAAACTTCAATGGAACCGGCGTAGGATTCGGTTTTGGTGTCGGTTGCGGGTTCGGCGTAGGATGGGGTTTTGGAGGAATGCCTTTGAACTTCTTGGGCCT
TGGTGCGGGGGGTGGATGTGGCGTTGGATTGGGACTTGGATGGGGCTTCGGCACAGCTTTCGGGAGCAAGTATAGGTCCTCCAGGATGATATTTCAGGGAATGGAATTTG
AGAACAAGGATCAAAATCAAAATTATGTTGGCAAGGACTCAAAAGATGTAACCCGAAAGTCCGGAGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCTCAAACTTCAATGGAACCGGCGTAGGATTCGGTTTTGGTGTCGGTTGCGGGTTCGGCGTAGGATGGGGTTTTGGAGGAATGCCTTTGAACTTCTTGGGCCT
TGGTGCGGGGGGTGGATGTGGCGTTGGATTGGGACTTGGATGGGGCTTCGGCACAGCTTTCGGGAGCAAGTATAGGTCCTCCAGGATGATATTTCAGGGAATGGAATTTG
AGAACAAGGATCAAAATCAAAATTATGTTGGCAAGGACTCAAAAGATGTAACCCGAAAGTCCGGAGGAGATTGA
Protein sequenceShow/hide protein sequence
MVLSNFNGTGVGFGFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFENKDQNQNYVGKDSKDVTRKSGGD