; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009274 (gene) of Chayote v1 genome

Gene IDSed0009274
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor bHLH162-like
Genome locationLG05:41597213..41597892
RNA-Seq ExpressionSed0009274
SyntenySed0009274
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944108.1 transcription factor bHLH162-like [Cucurbita moschata]6.7e-3564.79Show/hide
Query:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q
        MKSLYS LNSL+PT+HSNE PLSV +QIE+AI YIKSLE+ LK+  EKKE   +RS   SSS  APT SRN N   PEL IKEMGSAVEVVL+TGLEE +
Subjt:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q

Query:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        FIFYEII IF+EER +I++  YS++GN+  YSL+ E+  V+Y
Subjt:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

XP_022986054.1 transcription factor bHLH162-like [Cucurbita maxima]2.0e-3463.38Show/hide
Query:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q
        MKSLYS LNSL+PT+HSNE PLSVS+QIE+AI YIKSLE+ LK+  EKKE   ++S   SS  TAPT SRN N   PEL IKE+GSAVEVVL+ GLEE +
Subjt:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q

Query:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        FIFYEII IF++ER +I++  YS++GN+  YSLH E+  V+Y
Subjt:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

XP_023512282.1 transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]7.9e-3663.83Show/hide
Query:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEEQF
        MK LYS LNSL+PT+HSNE PLSVS+QIE+AI YIKSLE+ LK+  EKKE   +RS   SSS  APT +RN N   PEL IKEMGS VEVVL+TGLE++F
Subjt:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEEQF

Query:  IFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        IFYEII IF+EER +I++  YS++GN+  YSLH E+  V+Y
Subjt:  IFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

XP_038902350.1 transcription factor bHLH162-like [Benincasa hispida]7.9e-3663.76Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL
        +EKNRRN MKSLYS+LNSL+PT HSN  PL+VS QIE+ I  IKSLEI LK+  EKKE L+++SKM  SS +    S N N   PEL IKEMGSAVEVVL
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL

Query:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        TTGLE++ IFYEIIRIF+EERV+II+  YS L +   YSLH E+  V+Y
Subjt:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

XP_038902351.1 transcription factor bHLH162-like [Benincasa hispida]1.2e-3965.77Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL
        MEKNRRN MKSLY++LNSL+P +HSNE PL+V +QI++AI YIKSLEINLK+  EKKE L+++SK+ SSSS+    S + N   PEL IKEMGSAVEVVL
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL

Query:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        TTGLE++ IFYEIIRIF EERV+II+  YSIL N   YSLH E+  V+Y
Subjt:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

TrEMBL top hitse value%identityAlignment
A0A1S4DX24 transcription factor bHLH36-like isoform X16.3e-3157.53Show/hide
Query:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG
        MKSLYS LNSL+P++HSN+  P +V++QIE AINYIKSLEI LK+  EKKE  ++RSK+ SSS+ + +S    S + N   PEL IKEMGSAVEVVL TG
Subjt:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG

Query:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        LE++ +FYE IRI +EER +II+  YS+L +   YSLH E+  V+Y
Subjt:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

A0A5A7V416 Transcription factor bHLH36-like isoform X16.3e-3157.53Show/hide
Query:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG
        MKSLYS LNSL+P++HSN+  P +V++QIE AINYIKSLEI LK+  EKKE  ++RSK+ SSS+ + +S    S + N   PEL IKEMGSAVEVVL TG
Subjt:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG

Query:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        LE++ +FYE IRI +EER +II+  YS+L +   YSLH E+  V+Y
Subjt:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

A0A5D3BZ69 Transcription factor bHLH36-like isoform X16.3e-3157.53Show/hide
Query:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG
        MKSLYS LNSL+P++HSN+  P +V++QIE AINYIKSLEI LK+  EKKE  ++RSK+ SSS+ + +S    S + N   PEL IKEMGSAVEVVL TG
Subjt:  MKSLYSHLNSLIPTNHSNES-PLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTS----SRNNNNIAPELIIKEMGSAVEVVLTTG

Query:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        LE++ +FYE IRI +EER +II+  YS+L +   YSLH E+  V+Y
Subjt:  LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

A0A6J1FXP8 transcription factor bHLH162-like3.2e-3564.79Show/hide
Query:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q
        MKSLYS LNSL+PT+HSNE PLSV +QIE+AI YIKSLE+ LK+  EKKE   +RS   SSS  APT SRN N   PEL IKEMGSAVEVVL+TGLEE +
Subjt:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q

Query:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        FIFYEII IF+EER +I++  YS++GN+  YSL+ E+  V+Y
Subjt:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

A0A6J1JF05 transcription factor bHLH162-like9.5e-3563.38Show/hide
Query:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q
        MKSLYS LNSL+PT+HSNE PLSVS+QIE+AI YIKSLE+ LK+  EKKE   ++S   SS  TAPT SRN N   PEL IKE+GSAVEVVL+ GLEE +
Subjt:  MKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEE-Q

Query:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY
        FIFYEII IF++ER +I++  YS++GN+  YSLH E+  V+Y
Subjt:  FIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY

SwissProt top hitse value%identityAlignment
F4JIJ7 Transcription factor bHLH1621.7e-2040.67Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIA-----PELIIKEMGSA
        +EKNRR  MKSLYS L SL+P +HS+  PL++ +Q+++A NYIK L++N+++  E+K  L+  + +   +S   +S  ++ +++     P++ I+E GS 
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIA-----PELIIKEMGSA

Query:  VEVVLTTGLEEQFIFYEIIRIFHEE-RVQIIHAGYSILGNAAFYSLHGEV
          + L T LE +F+F EIIR+  EE   +I HAGYSI+ +A F++LH +V
Subjt:  VEVVLTTGLEEQFIFYEIIRIFHEE-RVQIIHAGYSILGNAAFYSLHGEV

Q9FLI1 Transcription factor bHLH362.2e-0426.71Show/hide
Query:  EKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKE--MLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV
        E+ RR  M SLY+ L SL+P  H  +   S S+Q+ +A+NYIK L+  +KE + +++  M++ R  +L SS+          +    +++++    VE++
Subjt:  EKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKE--MLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV

Query:  LTTG-LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV
        L++     Q  F  ++++  E  + ++++  SI+ +   Y++  EV
Subjt:  LTTG-LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV

Q9STJ7 Transcription factor bHLH1188.9e-0628.47Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL
        +EK RR  M SLY+ L SL+P     +   S S+Q++ A+NYI  L+ N+K+ N K++ L+    +LS  S   ++ +  N I+  ++I+     +E+VL
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL

Query:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV
        +     Q  F  ++++  E  + ++    S + +   ++L  EV
Subjt:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV

Arabidopsis top hitse value%identityAlignment
AT1G10586.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.9e-0429.05Show/hide
Query:  EKNRRNHMKSLYSHLNSLI-PTNHSNESPLSVSNQIEQAINYIKSLEINLKEANE-KKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV
        EK RR  MK L+S L+S + PT       L V   I+QA++Y+  L+  +   NE K+ ML    K  S  S          ++ P+L I+ + S +E+ 
Subjt:  EKNRRNHMKSLYSHLNSLI-PTNHSNESPLSVSNQIEQAINYIKSLEINLKEANE-KKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV

Query:  LTTGLE-EQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYI
        L   L  +  + ++++ +F EE  Q++ A    L +  FY++  +  I
Subjt:  LTTGLE-EQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYI

AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-0437.5Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSST
        +E+ RR  + SL+  L +L+P  +  +   S S+ I QA+NYIK L+I +KE NEK+  +    K++S+++T
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSST

AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.2e-2140.67Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIA-----PELIIKEMGSA
        +EKNRR  MKSLYS L SL+P +HS+  PL++ +Q+++A NYIK L++N+++  E+K  L+  + +   +S   +S  ++ +++     P++ I+E GS 
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIA-----PELIIKEMGSA

Query:  VEVVLTTGLEEQFIFYEIIRIFHEE-RVQIIHAGYSILGNAAFYSLHGEV
          + L T LE +F+F EIIR+  EE   +I HAGYSI+ +A F++LH +V
Subjt:  VEVVLTTGLEEQFIFYEIIRIFHEE-RVQIIHAGYSILGNAAFYSLHGEV

AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.3e-0728.47Show/hide
Query:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL
        +EK RR  M SLY+ L SL+P     +   S S+Q++ A+NYI  L+ N+K+ N K++ L+    +LS  S   ++ +  N I+  ++I+     +E+VL
Subjt:  MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVL

Query:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV
        +     Q  F  ++++  E  + ++    S + +   ++L  EV
Subjt:  TTGLEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.6e-0526.71Show/hide
Query:  EKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKE--MLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV
        E+ RR  M SLY+ L SL+P  H  +   S S+Q+ +A+NYIK L+  +KE + +++  M++ R  +L SS+          +    +++++    VE++
Subjt:  EKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKE--MLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVV

Query:  LTTG-LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV
        L++     Q  F  ++++  E  + ++++  SI+ +   Y++  EV
Subjt:  LTTG-LEEQFIFYEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAATCGCAGAAATCACATGAAATCGCTCTATTCCCACCTCAATTCTCTTATCCCAACAAATCATTCCAATGAGTCTCCACTGTCTGTATCAAATCAGATAGA
ACAAGCAATAAACTACATAAAATCACTTGAGATAAATCTGAAGGAGGCCAACGAAAAAAAAGAGATGTTGATGAAAAGATCGAAAATGTTATCGTCATCGTCAACTGCCC
CGACCAGTAGCCGAAATAATAACAACATTGCACCCGAATTGATAATCAAAGAGATGGGTTCGGCTGTGGAGGTTGTGTTAACAACTGGGTTGGAGGAGCAGTTCATATTC
TACGAGATTATTCGAATCTTCCACGAGGAGCGAGTTCAGATCATCCATGCTGGTTACTCCATTCTCGGGAACGCCGCCTTTTATTCGCTTCATGGAGAGGTATATATCGT
AATCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAATCGCAGAAATCACATGAAATCGCTCTATTCCCACCTCAATTCTCTTATCCCAACAAATCATTCCAATGAGTCTCCACTGTCTGTATCAAATCAGATAGA
ACAAGCAATAAACTACATAAAATCACTTGAGATAAATCTGAAGGAGGCCAACGAAAAAAAAGAGATGTTGATGAAAAGATCGAAAATGTTATCGTCATCGTCAACTGCCC
CGACCAGTAGCCGAAATAATAACAACATTGCACCCGAATTGATAATCAAAGAGATGGGTTCGGCTGTGGAGGTTGTGTTAACAACTGGGTTGGAGGAGCAGTTCATATTC
TACGAGATTATTCGAATCTTCCACGAGGAGCGAGTTCAGATCATCCATGCTGGTTACTCCATTCTCGGGAACGCCGCCTTTTATTCGCTTCATGGAGAGGTATATATCGT
AATCTATTAG
Protein sequenceShow/hide protein sequence
MEKNRRNHMKSLYSHLNSLIPTNHSNESPLSVSNQIEQAINYIKSLEINLKEANEKKEMLMKRSKMLSSSSTAPTSSRNNNNIAPELIIKEMGSAVEVVLTTGLEEQFIF
YEIIRIFHEERVQIIHAGYSILGNAAFYSLHGEVYIVIY