CuGenDBv2

Gene ID	Sed0009283
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein 230
Genome location	LG10:7604523..7607964
RNA-Seq Expression	Sed0009283
Synteny	Sed0009283
Gene Ontology terms	GO:0005768 - endosome (cellular component) GO:0005776 - autophagosome (cellular component) GO:0005794 - Golgi apparatus (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008590 - Transmembrane protein 230/134 IPR044234 - Transmembrane protein 230

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]

1.3e-41

78.45

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]

8.8e-43

80.17

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]

9.7e-42

79.31

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRR+V Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGY FASIPDY
Subjt:  AWRSANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]

3.0e-43

81.03

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

XP_038889462.1 transmembrane protein 230 [Benincasa hispida]

3.7e-41

79.31

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y SLATDD DLD +GS YDPRFYYTPKAFDKIPWKSIALA+FLL LG LLLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C9X7 Transmembrane protein 230

4.0e-41

76.72

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRN+ Y+SLA+DD D+D +GS++DPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 230

6.2e-42

78.45

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 230

4.3e-43

80.17

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 230

4.7e-42

79.31

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Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRR+V Y+SLA DD DLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLL LGSLLLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGY FASIPDY
Subjt:  AWRSANGYRFASIPDY

A0A6J1K312 Transmembrane protein 230

6.2e-42

78.45

Show/hide

Query:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY
        M SRRNV Y+SL+TDD DLD DG+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLFLSYFVLTGH AGEKSQAYGLLALG ++         IAYY
Subjt:  MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALG-VSVTAQLLRHGIAYY

Query:  AWRSANGYRFASIPDY
        AWR ANGYRFASIPDY
Subjt:  AWRSANGYRFASIPDY

SwissProt top hits

e value

%identity

Alignment

Q5BJP5 Transmembrane protein 230

7.6e-05

34.38

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Query:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY
        D    D +F  +P    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +L +G+ V      H  IAYYA +   GY +  IPD+
Subjt:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY

Q5R8X3 Transmembrane protein 230

4.4e-05

35.42

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Query:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY
        D    D +F  TP    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +L +G+ V      H  IAYYA +   GY +  IPD+
Subjt:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY

Q5ZLH4 Transmembrane protein 230

2.0e-05

33.93

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Query:  VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRS
        V Y+ LA TDD  +D    +  P          KIP+K+IALA+ L  +G+ L+ +   +L G+   G   +A  +L +G+ V      H  IAYYA + 
Subjt:  VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRS

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q8CIB6 Transmembrane protein 230

4.4e-05

33.93

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Query:  VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRS
        V Y+ LA TDD  +D    +  P          KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +L +G+ V      H  IAYYA + 
Subjt:  VCYNSLA-TDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRS

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q96A57 Transmembrane protein 230

2.6e-05

35.42

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Query:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY
        D    D +F  TP    KIP+K+IALA  L  +G+ L+ +   +L+G+   G   +A  +L +G+ V      H  IAYYA +   GY +  IPD+
Subjt:  DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGH-KAGEKSQAYGLLALGVSVTAQLLRH-GIAYYAWRSANGYRFASIPDY

Arabidopsis top hits

e value

%identity

Alignment

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)

2.9e-28

52.89

Show/hide

Query:  MESRRNVCYNSLATDDKDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALGV-SVTAQLLRH
        M SRR+V Y  L  D+ D  Y     +   +DPRF Y+PKAFD++PWKSIALA+FLL LG LLL LS+F+  GH  G+ SQ Y LL LG+ +        
Subjt:  MESRRNVCYNSLATDDKDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALGV-SVTAQLLRH

Query:  GIAYYAWRSANGYRFASIPDY
         IAYY+WR A GYRFA+IP Y
Subjt:  GIAYYAWRSANGYRFASIPDY

Sequences

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CDS sequence

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ATGGAATCTAGAAGAAATGTTTGTTACAACTCCCTTGCCACTGATGATAAGGATCTTGATTATGATGGAAGTCAGTATGACCCTCGTTTTTACTATACACCAAAAGCTTT
TGATAAGATCCCGTGGAAATCCATTGCTCTGGCAATGTTCCTTTTATCTCTTGGATCATTGCTTCTCTTTCTTTCGTATTTCGTATTAACGGGGCACAAGGCAGGAGAGA
AATCACAAGCTTATGGTCTTTTAGCATTGGGGGTTTCTGTAACAGCCCAGCTTTTACGACACGGGATTGCTTATTATGCATGGAGGAGTGCCAACGGATATCGCTTTGCT
TCCATTCCTGATTACTAG

mRNA sequence

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Protein sequence

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MESRRNVCYNSLATDDKDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAMFLLSLGSLLLFLSYFVLTGHKAGEKSQAYGLLALGVSVTAQLLRHGIAYYAWRSANGYRFA
SIPDY

Sed0009283 (gene) of Chayote v1 genome