; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009301 (gene) of Chayote v1 genome

Gene IDSed0009301
OrganismSechium edule (Chayote v1)
DescriptionMYND-type domain-containing protein
Genome locationLG12:34560309..34561742
RNA-Seq ExpressionSed0009301
SyntenySed0009301
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR036047 - F-box-like domain superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057772.1 F-box protein [Cucumis melo var. makuwa]5.9e-11666.17Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLAASA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  +NWCDS+H+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVR+N  EGRR ++QAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELA  LLS SS   +  Q RH++  ++ D+T  + CSLL+DFG NV APEPHPV  FLR+W ESE  VAARG  LR+CS+ GCGRAE+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN
        CG V+YCSRGCQ  DWKV H  +C  + R+  E  NN
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN

KAG6589385.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]7.7e-11667.38Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN     +    LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVAAR   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ  DWKV H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

KAG7023063.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]7.7e-11667.38Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN     +    LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVAAR   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ  DWKV H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

XP_022921747.1 F-box protein At1g67340-like [Cucurbita moschata]4.5e-11667.68Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVAAR   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ  DWKV H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

XP_023516460.1 F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]4.5e-11667.68Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVAAR   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ  DWKV H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

TrEMBL top hitse value%identityAlignment
A0A1S3CLL0 F-box protein At1g67340-like1.1e-11565.88Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL  LAASA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  +NWCDS+H+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVR+N  EGRR ++QAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELA  LLS SS   +  Q RH++  ++ D+T  + CSLL+DFG NV APEPHPV  FLR+W ESE  VAARG  LR+CS+ GCGRAE+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN
        CG V+YCSRGCQ  DWKV H  +C  + R+  E  NN
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN

A0A5A7UPI5 F-box protein2.8e-11666.17Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLAASA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  +NWCDS+H+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVR+N  EGRR ++QAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELA  LLS SS   +  Q RH++  ++ D+T  + CSLL+DFG NV APEPHPV  FLR+W ESE  VAARG  LR+CS+ GCGRAE+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN
        CG V+YCSRGCQ  DWKV H  +C  + R+  E  NN
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN

A0A5D3BGS7 F-box protein1.1e-11565.88Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL  LAASA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  +NWCDS+H+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVR+N  EGRR ++QAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELA  LLS SS   +  Q RH++  ++ D+T  + CSLL+DFG NV APEPHPV  FLR+W ESE  VAARG  LR+CS+ GCGRAE+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN
        CG V+YCSRGCQ  DWKV H  +C  + R+  E  NN
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAI-RYAVEPNNN

A0A6J1E1B7 F-box protein At1g67340-like2.2e-11667.68Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        MIS KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ CVDAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVAAR   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ  DWKV H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

A0A6J1JFU9 F-box protein At1g67340-like9.2e-11566.46Show/hide
Query:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC
        M S KR R        SD FD LPDDL++HLL RLA+SA+SPSDL+N L TCKR +RL+LHPLVLSK GP+AF V  + WCDSAH+FL+ C DAGN EA 
Subjt:  MISGKRKR--------SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEAC

Query:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN
        YTLGMI +YC  NR  GASLMAKAAIKSH PALYSLAVIQFN      S + LQAGVALCARAA LGHVDALRELGHCLQDGYGVRRN  EGRR +IQAN
Subjt:  YTLGMILYYCFGNREGGASLMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQAN

Query:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF
        ARELAA LLS SS  R   Q RHH+F ++ D+T  + CSLL+DFG +  A EPHPV  FLR+W ESERGVA R   LR+CS+ GCGR E+R  EFRRCS 
Subjt:  ARELAAGLLSCSSSARMLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSF

Query:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG V+YCSRGCQ+ DWK+ H  +C A++
Subjt:  CGIVSYCSRGCQTHDWKVGHNHKCMAIR

SwissProt top hitse value%identityAlignment
Q9FK27 F-box protein At5g504501.4e-8856.07Show/hide
Query:  FDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREGGAS
        F+ L DDL++ +L +LA SA+SPSD +  L TCKR +RL LHPLVLSK G +   V ++ W DS+HKFL+LCV+AGNI+A Y+LGMI +YC  N   GAS
Subjt:  FDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREGGAS

Query:  LMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSARMLI
        LMAKAAIKSH PALYSL+VIQFN      + + L+AGVALCAR+A LGHVDALRELGHCLQDGYGV R+  EGRR +IQANARELA     CS  + + +
Subjt:  LMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSARMLI

Query:  QDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVG
        +      E++ D++V             V   E HPV RFL++W  S R   A G  LR+CS+ GCGR E+RA EFRRCS CG V+YCSRGCQ  DW+  
Subjt:  QDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVG

Query:  HNHKC
        H  +C
Subjt:  HNHKC

Q9FYF9 F-box protein At1g673401.2e-9555.7Show/hide
Query:  SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREG
        +D  DS+PDDLV+ +L +L +++  P+D IN L TCKR   L ++P+VLS+  P+A  V + NW + +H+FL+ CVDAG++EACYTLGMI +YC  NR  
Subjt:  SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREG

Query:  GASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSAR
        GASLMAKAAI SH PALYSLAVIQFN     +    L+AGVALCARAA LGHVDALRELGHCLQDGYGV +N  EGRRF++QANARELAA +LS    AR
Subjt:  GASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSAR

Query:  MLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDW
                    ++       C LL+DFG NV APE HP  RFL DW  + RG    G  LR+CS+ GCGR E+R  EFRRCS CG+V+YCSR CQ  DW
Subjt:  MLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDW

Query:  KVGHNHKCMAIRYAVE
        K+ H   C  ++  +E
Subjt:  KVGHNHKCMAIRYAVE

Q9SJA1 Ubiquitin carboxyl-terminal hydrolase 192.8e-0447.73Show/hide
Query:  CGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG+A +     ++CS C  V YCS  CQT DWK GH  KC   R
Subjt:  CGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVGHNHKCMAIR

Arabidopsis top hitse value%identityAlignment
AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger8.5e-9755.7Show/hide
Query:  SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREG
        +D  DS+PDDLV+ +L +L +++  P+D IN L TCKR   L ++P+VLS+  P+A  V + NW + +H+FL+ CVDAG++EACYTLGMI +YC  NR  
Subjt:  SDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREG

Query:  GASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSAR
        GASLMAKAAI SH PALYSLAVIQFN     +    L+AGVALCARAA LGHVDALRELGHCLQDGYGV +N  EGRRF++QANARELAA +LS    AR
Subjt:  GASLMAKAAIKSHPPALYSLAVIQFNAPNSRRG---LQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSAR

Query:  MLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDW
                    ++       C LL+DFG NV APE HP  RFL DW  + RG    G  LR+CS+ GCGR E+R  EFRRCS CG+V+YCSR CQ  DW
Subjt:  MLIQDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDW

Query:  KVGHNHKCMAIRYAVE
        K+ H   C  ++  +E
Subjt:  KVGHNHKCMAIRYAVE

AT2G24640.1 ubiquitin-specific protease 192.0e-0547.73Show/hide
Query:  CGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVGHNHKCMAIR
        CG+A +     ++CS C  V YCS  CQT DWK GH  KC   R
Subjt:  CGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVGHNHKCMAIR

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger1.0e-8956.07Show/hide
Query:  FDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREGGAS
        F+ L DDL++ +L +LA SA+SPSD +  L TCKR +RL LHPLVLSK G +   V ++ W DS+HKFL+LCV+AGNI+A Y+LGMI +YC  N   GAS
Subjt:  FDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREGGAS

Query:  LMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSARMLI
        LMAKAAIKSH PALYSL+VIQFN      + + L+AGVALCAR+A LGHVDALRELGHCLQDGYGV R+  EGRR +IQANARELA     CS  + + +
Subjt:  LMAKAAIKSHPPALYSLAVIQFN---APNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSARMLI

Query:  QDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVG
        +      E++ D++V             V   E HPV RFL++W  S R   A G  LR+CS+ GCGR E+RA EFRRCS CG V+YCSRGCQ  DW+  
Subjt:  QDRHHRFESILDMTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVG

Query:  HNHKC
        H  +C
Subjt:  HNHKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTGGGAAGAGGAAAAGATCCGACCCCTTCGATTCGTTGCCGGACGATCTTGTTGTGCACCTCCTGTCCCGCCTGGCCGCCTCCGCCGCCTCCCCTTCCGATCT
CATCAACGCTCTCTTCACATGCAAGAGATTCCATCGCCTGCTTCTTCATCCTCTGGTTTTGTCCAAACCCGGACCGGAGGCCTTTTTAGTTCCCTCCAAAAACTGGTGTG
ATTCCGCTCACAAATTCCTTCAACTCTGTGTCGACGCCGGTAACATTGAAGCATGTTACACCCTCGGAATGATCCTATATTATTGCTTCGGAAATCGAGAGGGTGGAGCT
TCTCTAATGGCCAAAGCGGCCATTAAATCTCACCCCCCGGCGCTCTACTCCCTGGCGGTGATTCAATTCAACGCCCCCAACAGCCGCCGGGGCCTCCAGGCCGGCGTCGC
CCTATGTGCACGCGCCGCTTCTCTCGGCCACGTGGACGCGCTTCGCGAACTCGGGCACTGCCTGCAGGACGGTTACGGAGTGCGGCGGAACCCCGGGGAAGGGCGGCGGT
TCATCATCCAGGCCAACGCGCGTGAGCTCGCGGCCGGTCTGCTCTCCTGCTCCTCCTCGGCGAGGATGTTAATCCAAGACCGCCACCACCGGTTCGAGAGCATCCTGGAC
ATGACGGTGATGAGCTTCTGTTCTTTGCTGAACGATTTCGGGGCCAACGTGGGGGCGCCGGAGCCGCACCCGGTGCAGCGGTTTTTGAGGGATTGGTTGGAGTCGGAGCG
GGGAGTGGCGGCGCGTGGGGCGATGCTGCGTGTGTGCTCGTACCCGGGGTGCGGCCGGGCGGAGAGTCGGGCGAGCGAGTTCCGACGGTGCTCGTTTTGCGGGATTGTGA
GTTACTGTTCAAGGGGATGCCAAACGCATGACTGGAAAGTAGGCCATAACCACAAGTGTATGGCCATTCGCTATGCTGTGGAGCCCAACAACAACTTGGCTCTTCTATAA
mRNA sequenceShow/hide mRNA sequence
GATTGGGAGAAAATGAGGAAAGCAAGGCATTAGAATTCTTTTAACTAAAAAAAAAAGTGGAGGTCCCAGCGGCGTGGTTGGAATTGGTGTTTACCGAACACATACAAAAG
AAAAAAGAGTAAGCACAACGGTTACATTTGTGACGCCAACAACATGATTTCTGGGAAGAGGAAAAGATCCGACCCCTTCGATTCGTTGCCGGACGATCTTGTTGTGCACC
TCCTGTCCCGCCTGGCCGCCTCCGCCGCCTCCCCTTCCGATCTCATCAACGCTCTCTTCACATGCAAGAGATTCCATCGCCTGCTTCTTCATCCTCTGGTTTTGTCCAAA
CCCGGACCGGAGGCCTTTTTAGTTCCCTCCAAAAACTGGTGTGATTCCGCTCACAAATTCCTTCAACTCTGTGTCGACGCCGGTAACATTGAAGCATGTTACACCCTCGG
AATGATCCTATATTATTGCTTCGGAAATCGAGAGGGTGGAGCTTCTCTAATGGCCAAAGCGGCCATTAAATCTCACCCCCCGGCGCTCTACTCCCTGGCGGTGATTCAAT
TCAACGCCCCCAACAGCCGCCGGGGCCTCCAGGCCGGCGTCGCCCTATGTGCACGCGCCGCTTCTCTCGGCCACGTGGACGCGCTTCGCGAACTCGGGCACTGCCTGCAG
GACGGTTACGGAGTGCGGCGGAACCCCGGGGAAGGGCGGCGGTTCATCATCCAGGCCAACGCGCGTGAGCTCGCGGCCGGTCTGCTCTCCTGCTCCTCCTCGGCGAGGAT
GTTAATCCAAGACCGCCACCACCGGTTCGAGAGCATCCTGGACATGACGGTGATGAGCTTCTGTTCTTTGCTGAACGATTTCGGGGCCAACGTGGGGGCGCCGGAGCCGC
ACCCGGTGCAGCGGTTTTTGAGGGATTGGTTGGAGTCGGAGCGGGGAGTGGCGGCGCGTGGGGCGATGCTGCGTGTGTGCTCGTACCCGGGGTGCGGCCGGGCGGAGAGT
CGGGCGAGCGAGTTCCGACGGTGCTCGTTTTGCGGGATTGTGAGTTACTGTTCAAGGGGATGCCAAACGCATGACTGGAAAGTAGGCCATAACCACAAGTGTATGGCCAT
TCGCTATGCTGTGGAGCCCAACAACAACTTGGCTCTTCTATAATCTCAACACACACACACTCTCATTTTCGATCATTCTAAACACAGTAATTTCCTTTCTTTTCCAGTTT
TCCTTACAACACAGGCTTTATGGTGTGTTGTGTTTATAGCTAAATCATAA
Protein sequenceShow/hide protein sequence
MISGKRKRSDPFDSLPDDLVVHLLSRLAASAASPSDLINALFTCKRFHRLLLHPLVLSKPGPEAFLVPSKNWCDSAHKFLQLCVDAGNIEACYTLGMILYYCFGNREGGA
SLMAKAAIKSHPPALYSLAVIQFNAPNSRRGLQAGVALCARAASLGHVDALRELGHCLQDGYGVRRNPGEGRRFIIQANARELAAGLLSCSSSARMLIQDRHHRFESILD
MTVMSFCSLLNDFGANVGAPEPHPVQRFLRDWLESERGVAARGAMLRVCSYPGCGRAESRASEFRRCSFCGIVSYCSRGCQTHDWKVGHNHKCMAIRYAVEPNNNLALL