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Sed0009315 (gene) of Chayote v1 genome

Gene IDSed0009315
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG06:37667961..37668600
RNA-Seq ExpressionSed0009315
SyntenySed0009315
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607004.1 hypothetical protein SDJN03_00346, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4064.43Show/hide
Query:  MARPIPTFLN---HVPFSSASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEG----------L
        MA+P P+F N   H+PFSS SL+AS+A LSI ALV+F+CTSSRKSK      QQRN V+K+NSNIS +A+S+AKM+SWR+V+AAD++EG          L
Subjt:  MARPIPTFLN---HVPFSSASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEG----------L

Query:  SVDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFESV
        S DD DDEVWRKTIIRGERCRPLEFSGKIDYD DGNL+C S   +F+SV
Subjt:  SVDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFESV

KAG7036703.1 hypothetical protein SDJN02_00323, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4065.31Show/hide
Query:  MARPIPTFLN---HVPFSSASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEG--------LSV
        MA+P P+F N   H+PFSS SL+AS+A LSI ALV+F+CTSSRKSK      QQRN V+K+NSNIS +A+S+AKM+SWR+V+AAD++EG        LS 
Subjt:  MARPIPTFLN---HVPFSSASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEG--------LSV

Query:  DDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFESV
        DD DDEVWRKTIIRGERCRPLEFSGKIDYD DGNL+C S   +F+SV
Subjt:  DDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFESV

KGN57848.1 hypothetical protein Csa_010872 [Cucumis sativus]3.5e-3054.19Show/hide
Query:  MARPIPTFLN-----HVPFSSAS----LIASLAALSILALVVFMCTSSRKSKISNRFEQQR-NLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVD
        MARP PT  N     H+ F S      ++++   LSI AL++F+CTSSRK   SN+ +Q R N VSK+NSNIS +A+SMAKM+SWR+V+AA++EE    +
Subjt:  MARPIPTFLN-----HVPFSSAS----LIASLAALSILALVVFMCTSSRKSKISNRFEQQR-NLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVD

Query:  -----------DDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE
                   D+++EVWRKTIIRGERCRPLEFSGKIDYD DGNL+C SN  DF+
Subjt:  -----------DDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE

TYK22452.1 hypothetical protein E5676_scaffold712G00010 [Cucumis melo var. makuwa]4.3e-2855.7Show/hide
Query:  MARPIPTF--LNHVP----FS---SASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAAD---DEEGLS
        MARP PT   L+H P    FS   S  ++++   LSI AL++F+CTSS KS  S   + +   VSK+NSNIS +A+SMAK++SWR+V+AAD   +E G  
Subjt:  MARPIPTF--LNHVP----FS---SASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAAD---DEEGLS

Query:  VDD---DDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE
          D   D++EVWRKTIIRGERCRPLEFSGKIDYD DGNL+C SN  DF+
Subjt:  VDD---DDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE

XP_038906595.1 uncharacterized protein LOC120092546 [Benincasa hispida]4.0e-2656.52Show/hide
Query:  MARPIPTFLNH--------VPFSSAS---LIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEE----
        MAR  P+  N         +PFSS +   LI+S+A LSI ALVVF+CTSSRK   SN+ +Q+RN VSK+NSNIS +A+SMAKM+SWR+V+AAD+E+    
Subjt:  MARPIPTFLNH--------VPFSSAS---LIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEE----

Query:  ----GLSVDD---DDDEVWRKTIIRGERCRPLEFSGKI
             LS DD   D++EVWRKTIIRGERCRPLEFS  +
Subjt:  ----GLSVDD---DDDEVWRKTIIRGERCRPLEFSGKI

TrEMBL top hitse value%identityAlignment
A0A059BTL4 Uncharacterized protein1.5e-2146.09Show/hide
Query:  PIPTFLNHVPFSSASLIASLAALSILALVVFMCTSSRKSKISNR------FEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVDDDDDEVW
        PI T +     S  S+   ++ LSIL+++ F+C S RKSK S +         ++ LVS++NS+IS KA+ MAKM+SWR+ +   +EE    +D D+ +W
Subjt:  PIPTFLNHVPFSSASLIASLAALSILALVVFMCTSSRKSKISNR------FEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVDDDDDEVW

Query:  RKTIIRGERCRPLEFSGKIDYDCDGNLV
        +KTII+GERCRPL+FSGKI+YD  GN+V
Subjt:  RKTIIRGERCRPLEFSGKIDYDCDGNLV

A0A0A0L7R8 Uncharacterized protein1.7e-3054.19Show/hide
Query:  MARPIPTFLN-----HVPFSSAS----LIASLAALSILALVVFMCTSSRKSKISNRFEQQR-NLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVD
        MARP PT  N     H+ F S      ++++   LSI AL++F+CTSSRK   SN+ +Q R N VSK+NSNIS +A+SMAKM+SWR+V+AA++EE    +
Subjt:  MARPIPTFLN-----HVPFSSAS----LIASLAALSILALVVFMCTSSRKSKISNRFEQQR-NLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVD

Query:  -----------DDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE
                   D+++EVWRKTIIRGERCRPLEFSGKIDYD DGNL+C SN  DF+
Subjt:  -----------DDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE

A0A2C9WM60 Uncharacterized protein5.5e-2144.96Show/hide
Query:  HVPFSS----ASLIASLAALSILALVVFMCTSSRKSKISNRFEQ---QRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVDDDDDEVWRKTIIR
        ++PFS+    +SL+  +   S+ ++V+F+C+S +  K+    +Q   ++ L+SKINS IS KA SM KM+SWR++  ADD++ L   + ++ +WRKTI++
Subjt:  HVPFSS----ASLIASLAALSILALVVFMCTSSRKSKISNRFEQ---QRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVDDDDDEVWRKTIIR

Query:  GERCRPLEFSGKIDYDCDGNLVCHSNNTD
        GERCRPL+FSGKI+YD  GNLV  S   D
Subjt:  GERCRPLEFSGKIDYDCDGNLVCHSNNTD

A0A5D3DFS8 Uncharacterized protein2.1e-2855.7Show/hide
Query:  MARPIPTF--LNHVP----FS---SASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAAD---DEEGLS
        MARP PT   L+H P    FS   S  ++++   LSI AL++F+CTSS KS  S   + +   VSK+NSNIS +A+SMAK++SWR+V+AAD   +E G  
Subjt:  MARPIPTF--LNHVP----FS---SASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAAD---DEEGLS

Query:  VDD---DDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE
          D   D++EVWRKTIIRGERCRPLEFSGKIDYD DGNL+C SN  DF+
Subjt:  VDD---DDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLVCHSNNTDFE

U5FKC5 Uncharacterized protein5.5e-2144.53Show/hide
Query:  MARPIPTFLNHVPFSS---ASLIASLAALSILALVVFMCTSSRKSKISNR---------FEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLS
        MARP+    NH   S+   ++ IA +A LS+ +LV F+C S  K++ S R            ++ L+SKINS+I  KA SM KM+SWR+++  D++    
Subjt:  MARPIPTFLNHVPFSS---ASLIASLAALSILALVVFMCTSSRKSKISNR---------FEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLS

Query:  VDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLV
         DD  +E+WR++I+ GERCRPL+FSGKI YDC+GNL+
Subjt:  VDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein6.0e-0438.1Show/hide
Query:  EEGLSVDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLV
        EE  +  +++  +W++ I+ G +C PL+FSG I YD +G L+
Subjt:  EEGLSVDDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGNLV

AT3G18560.1 unknown protein3.5e-0444.12Show/hide
Query:  DDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGN
        D+++  VW++ I+ G +C PL++SG I YDC G+
Subjt:  DDDDDEVWRKTIIRGERCRPLEFSGKIDYDCDGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGCCAATCCCAACCTTTTTAAATCACGTTCCATTTTCATCAGCGTCGCTCATCGCTTCACTCGCAGCGCTGTCGATCTTGGCGCTCGTGGTTTTCATGTGCAC
CTCGTCGAGAAAATCGAAGATATCGAATCGGTTTGAGCAGCAGAGGAATTTGGTGTCCAAGATCAACAGTAACATCAGTTGTAAGGCGGTTTCGATGGCGAAGATGTTAT
CGTGGAGGAGGGTCGATGCGGCAGACGACGAAGAAGGACTTAGTGTCGACGACGACGACGATGAGGTTTGGAGGAAGACGATTATCAGAGGCGAACGGTGTCGGCCGCTT
GAGTTTTCAGGGAAAATAGATTATGATTGTGATGGTAATTTGGTGTGCCATTCCAATAACACAGACTTTGAATCTGTTGAATCGTAG
mRNA sequenceShow/hide mRNA sequence
AAATGGCTCCCAATTATCTTCACTCAACAATTCCTCATTTTGCTCTGTTTCTTCCCCCGCCATGGCCAGGCCAATCCCAACCTTTTTAAATCACGTTCCATTTTCATCAG
CGTCGCTCATCGCTTCACTCGCAGCGCTGTCGATCTTGGCGCTCGTGGTTTTCATGTGCACCTCGTCGAGAAAATCGAAGATATCGAATCGGTTTGAGCAGCAGAGGAAT
TTGGTGTCCAAGATCAACAGTAACATCAGTTGTAAGGCGGTTTCGATGGCGAAGATGTTATCGTGGAGGAGGGTCGATGCGGCAGACGACGAAGAAGGACTTAGTGTCGA
CGACGACGACGATGAGGTTTGGAGGAAGACGATTATCAGAGGCGAACGGTGTCGGCCGCTTGAGTTTTCAGGGAAAATAGATTATGATTGTGATGGTAATTTGGTGTGCC
ATTCCAATAACACAGACTTTGAATCTGTTGAATCGTAGCACCATTTTCTCTCTGTTTTGTAAACTCGTCTGTTTCCGAGTTCGACGTAAGAAGTTGTTACATCAAAGTTC
TGTAAATAATTTCTACTTTAGAAGTCAATTAAGAATGATAAGAACCCACGGAGCTCATAACAAGGTGCTTGGATATGAAATTATAGAGTG
Protein sequenceShow/hide protein sequence
MARPIPTFLNHVPFSSASLIASLAALSILALVVFMCTSSRKSKISNRFEQQRNLVSKINSNISCKAVSMAKMLSWRRVDAADDEEGLSVDDDDDEVWRKTIIRGERCRPL
EFSGKIDYDCDGNLVCHSNNTDFESVES