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Sed0009318 (gene) of Chayote v1 genome

Gene IDSed0009318
OrganismSechium edule (Chayote v1)
DescriptionB3 domain-containing protein
Genome locationLG02:51305026..51308119
RNA-Seq ExpressionSed0009318
SyntenySed0009318
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044837 - B3 domain-containing protein REM16-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650806.1 B3 domain-containing protein Os04g0386900 [Cucumis sativus]4.0e-5673.47Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ  ++PPT+  +MEPQ+ E +PLSGKPYH  ILSKSHVAP  N+VLPAKFHS+LPAIVIPA+L    K WKIDY+GNRR KALDSKQWRKFV  NCLK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDA VFEL+ECSSS+LK RVQIL GDIP+ELH+KFSGE+K+TPIH+D
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]1.0e-5675.51Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PP +   M+PQ+S ILPLSGKPYHG+ILSKSHVAP CNM LPAKFHSVLPAI+IPA+L    K WKIDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFEL+ECSSS++K RVQILRGDIP ELHEKFSGES++TPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]1.2e-5776.87Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PPT+   M+PQ+S ILPLSGKPYHG+ILSKSHVAP CNM LPAKFHSVLPAI+IPA+L    K WKIDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFEL+ECSSS+LK RVQILRGDIP ELHEKFSGES++TPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]3.6e-5775.51Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PPT+   M+PQ+S ILPLSGKPYHG+ILSKSHVAP CNM +PAKFHSVLPAI+IPA+L    K WKIDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFEL+ECSSS++K RVQILRGDIP ELHEKFSGES++TPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]2.1e-5774.83Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PPT+  +MEPQD EILPLSGKPYH  ILSKSHVAP C++VLPAKFHS+LPAIVIPA+L    K W IDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFELMECSSS+LK RVQILRGDIP +LH+KFSGE+KDTPI+++
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

TrEMBL top hitse value%identityAlignment
A0A0A0L3V3 TF-B3 domain-containing protein1.9e-5673.47Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ  ++PPT+  +MEPQ+ E +PLSGKPYH  ILSKSHVAP  N+VLPAKFHS+LPAIVIPA+L    K WKIDY+GNRR KALDSKQWRKFV  NCLK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDA VFEL+ECSSS+LK RVQIL GDIP+ELH+KFSGE+K+TPIH+D
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

A0A6J1CYN6 B3 domain-containing protein Os04g0386900-like7.1e-5167.35Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PP++ A MEP+  EI PLS KP+HG+IL KSHVAP+  M LPAKFHSVLPAIVI  ++  G K W++DYYGNRR + LD++ WRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFELMECSSS++K RVQILRGDIPV+LH+KF GES+DTPI+ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

A0A6J1D033 B3 domain-containing protein Os04g0386900-like7.6e-5370.75Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PP++  +MEP++ EI PLS KP+HG+IL+KSHVAP  NM LPAKFHSVLPAIVI  +L  G K W +DYYGNRR K+LD++ WRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFELMECSSS LK RVQILRGDIPV+LH+KFSGESKDTPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like5.1e-5775.51Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PP +   M+PQ+S ILPLSGKPYHG+ILSKSHVAP CNM LPAKFHSVLPAI+IPA+L    K WKIDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFEL+ECSSS++K RVQILRGDIP ELHEKFSGES++TPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like6.0e-5876.87Show/hide
Query:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        MQ +++PPT+   M+PQ+S ILPLSGKPYHG+ILSKSHVAP CNM LPAKFHSVLPAI+IPA+L    K WKIDYYGNRR KALD+KQWRKFV  N LK 
Subjt:  MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GDACVFEL+ECSSS+LK RVQILRGDIP ELHEKFSGES++TPI ID
Subjt:  GDACVFELMECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

SwissProt top hitse value%identityAlignment
Q7XLP4 B3 domain-containing protein Os04g03869002.8e-2038Show/hide
Query:  TKAASMEPQDSE--------ILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL
        T+AA   P + E        +LPL GKPY   I+ KSHV P   +V+P  F  +LP+   PA L +  ++W + + G R I+ L++  WR F   N L+L
Subjt:  TKAASMEPQDSE--------ILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKL

Query:  GDACVFELM---ECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID
        GD CVFEL+         ++ RVQ+LR +IP  +  +  G +  TPI ID
Subjt:  GDACVFELM---ECSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID

Q8RYD1 B3 domain-containing protein REM164.3e-0532.65Show/hide
Query:  LILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKT-W--KIDYYGNRRIKALDSKQWRKFVYANCLKLGDACVFELMECSSSLLKLRVQILRGD
        + + +SHV   C + +P K+      I    ++   D+T W  K + +G R    + S  W+KFV  N L+ GD CVFE     +  L L V I RG+
Subjt:  LILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKT-W--KIDYYGNRRIKALDSKQWRKFVYANCLKLGDACVFELMECSSSLLKLRVQILRGD

Q9LHY9 B3 domain-containing protein Os06g01123001.0e-1435.66Show/hide
Query:  PPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVL--PAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKLGDAC
        PP  + S E  ++     +G P+   +++KSH+ P   M +P +F   L  P     A+L  G K+W   Y G+ ++K LD+  W +F   N L +GDAC
Subjt:  PPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVL--PAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKLGDAC

Query:  VFELMEC-SSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHI
        VFEL+   ++  L+ +VQILRG +P E+     G + D PI I
Subjt:  VFELMEC-SSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHI

Arabidopsis top hitse value%identityAlignment
AT4G33280.1 AP2/B3-like transcriptional factor family protein3.1e-0632.65Show/hide
Query:  LILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKT-W--KIDYYGNRRIKALDSKQWRKFVYANCLKLGDACVFELMECSSSLLKLRVQILRGD
        + + +SHV   C + +P K+      I    ++   D+T W  K + +G R    + S  W+KFV  N L+ GD CVFE     +  L L V I RG+
Subjt:  LILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKT-W--KIDYYGNRRIKALDSKQWRKFVYANCLKLGDACVFELMECSSSLLKLRVQILRGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCACGGAAGGAACCTCCGACGAAGGCTGCATCAATGGAGCCGCAAGATAGTGAAATTTTGCCTCTCTCGGGCAAACCCTACCATGGTCTTATTCTTTCGAAATC
GCATGTCGCTCCCTCGTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTGTGATCCCTGCGATTCTTTGTTATGGTGACAAGACATGGAAGATCG
ATTATTATGGGAACCGACGCATTAAAGCGCTCGACTCGAAACAGTGGAGGAAGTTTGTTTATGCCAATTGTCTAAAGCTTGGAGATGCTTGTGTATTTGAGCTGATGGAA
TGCAGCAGCAGCTTACTCAAATTGAGAGTTCAAATTCTTAGAGGCGACATCCCTGTCGAGCTGCACGAGAAGTTTAGTGGGGAGAGTAAAGACACTCCTATACACATTGA
CTAG
mRNA sequenceShow/hide mRNA sequence
GTGCCATTCTCAAGAACATACACAACGTGCGCTTCTTCAGGGTTTCTCTCTACTTGCCCCGAGCCATTGCAAGCTACAGGAGCTTCATTTGGCTTTAAACCGCCATTTGT
AAGTGATTTGTTACTGAAATTAGTCTCTAAATGCAACCACGGAAGGAACCTCCGACGAAGGCTGCATCAATGGAGCCGCAAGATAGTGAAATTTTGCCTCTCTCGGGCAA
ACCCTACCATGGTCTTATTCTTTCGAAATCGCATGTCGCTCCCTCGTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTGTGATCCCTGCGATTC
TTTGTTATGGTGACAAGACATGGAAGATCGATTATTATGGGAACCGACGCATTAAAGCGCTCGACTCGAAACAGTGGAGGAAGTTTGTTTATGCCAATTGTCTAAAGCTT
GGAGATGCTTGTGTATTTGAGCTGATGGAATGCAGCAGCAGCTTACTCAAATTGAGAGTTCAAATTCTTAGAGGCGACATCCCTGTCGAGCTGCACGAGAAGTTTAGTGG
GGAGAGTAAAGACACTCCTATACACATTGACTAGATTGCCCCTTACGTGGTCTCTTGTCTGTTTCGTGACGCGGCAGATAATTCGAACATGAAAATCACATTGGCAAAGT
AGCGCCAGCTCGAACTTGTCGACAGCATAGATGGTTCCATATCTGATAGCCCGCTTGATCTTTGTAAGTATGCATGTTATGTCTCCTATCACTAATACCTTTGTCTTAAT
ATTTTTTATTTCACTCAGACCAATAATCAGTATATATTTCATTGTTTCGAGATGGAGGATTTAAATTCATAGTCTTGAAATAAGTGTGTTAGTTCAACTTTTTTTATTAA
TAGGGGATTGAATGGTTTGAATTACAAATCTTGTGGTTGCTAATACGTCTAGATGAGAG
Protein sequenceShow/hide protein sequence
MQPRKEPPTKAASMEPQDSEILPLSGKPYHGLILSKSHVAPSCNMVLPAKFHSVLPAIVIPAILCYGDKTWKIDYYGNRRIKALDSKQWRKFVYANCLKLGDACVFELME
CSSSLLKLRVQILRGDIPVELHEKFSGESKDTPIHID