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Sed0009339 (gene) of Chayote v1 genome

Gene IDSed0009339
OrganismSechium edule (Chayote v1)
Descriptionindole-3-acetic acid-induced protein ARG2-like
Genome locationLG07:2350737..2351511
RNA-Seq ExpressionSed0009339
SyntenySed0009339
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953730.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial [Cucurbita moschata]5.1e-2876.42Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVKVI         SALSRRGYAA  ASQG V SSAV GGSVAAA N +LLKKSGEEKVVGSSEKV+WVPDPVTGYYRPE+ ADEIDVAELRS 
Subjt:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LL N++
Subjt:  LLKNKD

XP_022960392.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata]1.6e-2976.92Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+FSNVKV+         SALSRRGYAAASQG V SSAV GGSVA AR+ ++LKKSGEEKVVGSSEKVAWVPDP TGYYRPE+  DEIDVAELRSILL
Subjt:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNKD
        KNK+
Subjt:  KNKD

XP_022991270.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima]6.0e-2976.42Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVKV+         SALSRRGYAA  ASQG V SSAV GGSVAAARN +LLKKSGEEKVVGSSEKV+WVPDPVTGYYRPE+ ADEIDVAELRS+
Subjt:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LL N++
Subjt:  LLKNKD

XP_023513499.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo]3.5e-2975.96Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+FSNVKV+         SALSRRGYAAASQG V SSAV GGSV+ AR+ ++LKKSGEEKVVGSSEKVAWVPDP TGYYRPE+  DEIDVAELRSILL
Subjt:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNKD
        KNK+
Subjt:  KNKD

XP_023548996.1 indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo]6.0e-2976.42Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVKV+         SALSRRGYAA  ASQG V SSAV GGSVAAARN +LLKKSGEEKVVGSSEKV+WVPDPVTGYYRPE+ ADEIDVAELRS+
Subjt:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LL N++
Subjt:  LLKNKD

TrEMBL top hitse value%identityAlignment
A0A5D3D3A4 Indole-3-acetic acid-induced protein ARG2-like1.3e-2671.7Show/hide
Query:  MARAFSNVKVISA---------LSRRGYAAA--SQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVK++SA         L+ RGYAAA  SQG V SSAV G  VAAAR+ +LLKKSGEEKVVGS+EKV+WVPDPVTGYYRPE+  DEIDVAELRSI
Subjt:  MARAFSNVKVISA---------LSRRGYAAA--SQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LLKNK+
Subjt:  LLKNKD

A0A6J1GQH1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial2.5e-2876.42Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVKVI         SALSRRGYAA  ASQG V SSAV GGSVAAA N +LLKKSGEEKVVGSSEKV+WVPDPVTGYYRPE+ ADEIDVAELRS 
Subjt:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LL N++
Subjt:  LLKNKD

A0A6J1H796 indole-3-acetic acid-induced protein ARG2-like7.6e-3076.92Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+FSNVKV+         SALSRRGYAAASQG V SSAV GGSVA AR+ ++LKKSGEEKVVGSSEKVAWVPDP TGYYRPE+  DEIDVAELRSILL
Subjt:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNKD
        KNK+
Subjt:  KNKD

A0A6J1JSE9 indole-3-acetic acid-induced protein ARG2-like2.9e-2976.42Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        MAR+FSNVKV+         SALSRRGYAA  ASQG V SSAV GGSVAAARN +LLKKSGEEKVVGSSEKV+WVPDPVTGYYRPE+ ADEIDVAELRS+
Subjt:  MARAFSNVKVI---------SALSRRGYAA--ASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

Query:  LLKNKD
        LL N++
Subjt:  LLKNKD

A0A6J1KR71 indole-3-acetic acid-induced protein ARG2-like7.6e-3076.92Show/hide
Query:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+FSNVKV+         SALSRRGYAAASQG V SSAV GGSVA AR+ ++LKKSGEEKVVGSSEKVAWVPDP TGYYRPE+  DEIDVAELRSILL
Subjt:  MARAFSNVKVI---------SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNKD
        KNK+
Subjt:  KNKD

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG21.5e-1451.46Show/hide
Query:  MARAFSNVKVISAL---------SRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+F+NVKV+SAL         +R G+AAA+      SA  GG   A+   +++ KSGEEKV G  EKV+WVPDPVTGYYRPE+  +EIDVA++R+ +L
Subjt:  MARAFSNVKVISAL---------SRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
          K
Subjt:  KNK

P46521 Late embryogenesis abundant protein Lea5-A1.0e-1038.83Show/hide
Query:  MARAFSNVKVISA---------LSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ S+ K + A         +SRRGY+ A    V +S    G++     R  +K+S   +    S   AW PDPVTGYYRPE+C  EID A+LR ++L
Subjt:  MARAFSNVKVISA---------LSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         ++
Subjt:  KNK

P46522 Late embryogenesis abundant protein Lea5-D1.4e-1241.75Show/hide
Query:  MARAFSNVKVISA---------LSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ S+ K++ A         +SRRGY+ A    V +S    G++     RD +K+S   +    S   AW PDPVTGYYRPE+C  EID AELR +LL
Subjt:  MARAFSNVKVISA---------LSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         ++
Subjt:  KNK

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial3.0e-1549.51Show/hide
Query:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ SNVK++S         A+ RRGYAA +    VSS    G+VA+A    ++KK G E+   S++K++WVPDP TGYYRPE+ ++EID AELR+ LL
Subjt:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         NK
Subjt:  KNK

Q9SRX6 Late embryogenis abundant protein 22.4e-1246.6Show/hide
Query:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ +N K+ S         A+ RRG+AAA++          GSV+ A   ++ K++GE     SSEK  WVPDP TGYYRPE+ ++EID AELR+ILL
Subjt:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         NK
Subjt:  KNK

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein1.7e-1346.6Show/hide
Query:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ +N K+ S         A+ RRG+AAA++          GSV+ A   ++ K++GE     SSEK  WVPDP TGYYRPE+ ++EID AELR+ILL
Subjt:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         NK
Subjt:  KNK

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein1.7e-0543.4Show/hide
Query:  AARNRD--LLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI
        AA+  D  + K S  +  +   E++ W+PDP TGYYRP++ A E+D  ELRS+
Subjt:  AARNRD--LLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSI

AT4G02380.1 senescence-associated gene 212.1e-1649.51Show/hide
Query:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL
        MAR+ SNVK++S         A+ RRGYAA +    VSS    G+VA+A    ++KK G E+   S++K++WVPDP TGYYRPE+ ++EID AELR+ LL
Subjt:  MARAFSNVKVIS---------ALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILL

Query:  KNK
         NK
Subjt:  KNK

AT4G02380.2 senescence-associated gene 212.2e-1351.9Show/hide
Query:  RRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILLKNK
        +RGYAA +    VSS    G+VA+A    ++KK G E+   S++K++WVPDP TGYYRPE+ ++EID AELR+ LL NK
Subjt:  RRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILLKNK

AT4G15910.1 drought-induced 217.8e-1146.99Show/hide
Query:  SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILLKNK
        S + RR Y A SQ V  +    GGS      R ++ K  E++ +    + AW PDPVTGYYRP + A EID AELR +LLKNK
Subjt:  SALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILLKNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAGCTTTCTCCAACGTTAAGGTCATCTCCGCTCTCAGCAGGCGTGGCTATGCGGCGGCTTCGCAAGGAGTTGTTGTGTCGAGTGCGGTGGCCGGAGGAAGTGT
TGCGGCGGCGAGAAATCGCGATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGTTGGATCGTCCGAGAAGGTTGCTTGGGTGCCGGATCCTGTCACCGGATACTACCGAC
CGGAGAGTTGCGCCGATGAGATTGATGTTGCCGAACTTCGATCGATTCTTCTTAAGAACAAGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATTCATCGTCTCCAGTAGATAAAAAAAGCTGGATACAGTCCTCTCAGAAATTCTCTCCAATGGCTCGAGCTTTCTCCAACGTTAAGGTCATCTCCGCTCTCAGCAGGCGT
GGCTATGCGGCGGCTTCGCAAGGAGTTGTTGTGTCGAGTGCGGTGGCCGGAGGAAGTGTTGCGGCGGCGAGAAATCGCGATCTGTTGAAGAAATCGGGAGAGGAGAAGGT
TGTTGGATCGTCCGAGAAGGTTGCTTGGGTGCCGGATCCTGTCACCGGATACTACCGACCGGAGAGTTGCGCCGATGAGATTGATGTTGCCGAACTTCGATCGATTCTTC
TTAAGAACAAGGACTAATCGATTGCAGTTCTGATTTGAATTTGTGAATCCAGTTTAGGGATTTGAAAACGGCTGGATCGGTATGTTTTTTTTTTTTTGGATTTGTATGTT
TTTTGTTTACTGTAACAGTATTATTATACACAACGAATGAATGAAATAGGTGCATTGTCTTTGGTTTCTGTTCTTCGATCTCCAAATTATTCCTCGAAATCGAATCAAGC
ATTTCGAGCCATGAAAAGGAACTTTAATGGCGGAAACTTTTTACGGAGAGTTGAAATTTGTATTTTCTGAGATTTTGAACGGACAGAGTGTAAAGCCTGATTTTCAAAGC
TGTATTGACGTTTGCATGTGAG
Protein sequenceShow/hide protein sequence
MARAFSNVKVISALSRRGYAAASQGVVVSSAVAGGSVAAARNRDLLKKSGEEKVVGSSEKVAWVPDPVTGYYRPESCADEIDVAELRSILLKNKD