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Sed0009343 (gene) of Chayote v1 genome

Gene IDSed0009343
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:20255613..20256127
RNA-Seq ExpressionSed0009343
SyntenySed0009343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036273.1 hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa]4.4e-1366.67Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDD--PVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN
        MSSMG SCARVYVMKKKAEEKLQ R+EQ+   RR+D   VKP  +AHH GG +AGK++ KVHPG VFGVP  S +
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDD--PVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN

KAG6594855.1 hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1268.66Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHHGGAVAGKATSKVHPGAVFGVP
        MSS+G SCARVYVMKKK EEKLQ R+EQ+   RR+D VKPS +AHHGGA AG    KVHPG V  VP
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHHGGAVAGKATSKVHPGAVFGVP

KAG6604014.1 hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1160.81Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQDRR---DDPVKPSNSAHH--GGAVAGKATSKVHPGAVFGVPVRSTN
        MSSMG +CARVYVM+KK EEKL +R+EQ+R    +D VKP  SAHH  GG +AGKA  KVHPG VF V   S +
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQDRR---DDPVKPSNSAHH--GGAVAGKATSKVHPGAVFGVPVRSTN

KGN48780.1 hypothetical protein Csa_002943 [Cucumis sativus]3.8e-1261.64Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN
        MSSMG SCARVYVMKKKAEEKLQ R+EQ+   RR+D VKP  ++HH  G +AGK++ KVHPG +FG+   S +
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KGB8 Uncharacterized protein1.8e-1261.64Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN
        MSSMG SCARVYVMKKKAEEKLQ R+EQ+   RR+D VKP  ++HH  G +AGK++ KVHPG +FG+   S +
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDDPVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN

A0A5A7T065 Uncharacterized protein2.1e-1366.67Show/hide
Query:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDD--PVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN
        MSSMG SCARVYVMKKKAEEKLQ R+EQ+   RR+D   VKP  +AHH GG +AGK++ KVHPG VFGVP  S +
Subjt:  MSSMGISCARVYVMKKKAEEKLQERIEQD---RRDD--PVKPSNSAHH-GGAVAGKATSKVHPGAVFGVPVRSTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCATGGGAATTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAGGCCGAGGAGAAACTGCAGGAGAGGATTGAGCAGGACAGAAGGGACGACCCGGTCAAACC
TTCCAATTCCGCCCATCACGGCGGCGCCGTCGCCGGAAAAGCCACTAGTAAAGTCCATCCCGGTGCCGTGTTTGGGGTTCCGGTGAGATCGACTAATTTGTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAGAAAAAAAAACCCCACAAAAATTAAAAAGAATTCGTGTTATTAATTTGGATTTTGTGTTGTGTAAAAAATCATGTCGTCCATGGGAATTAGCTGCGCTAGGGTTT
ATGTAATGAAAAAGAAGGCCGAGGAGAAACTGCAGGAGAGGATTGAGCAGGACAGAAGGGACGACCCGGTCAAACCTTCCAATTCCGCCCATCACGGCGGCGCCGTCGCC
GGAAAAGCCACTAGTAAAGTCCATCCCGGTGCCGTGTTTGGGGTTCCGGTGAGATCGACTAATTTGTGAAATTTAAAAAAAAAAAAAAAAAAAAAAAACAGGGCTCTCTG
GCTTTTACTTTCTGAACTGAAATTCTATGCCAGTTTTTATTGGGCCTTTTTATTTTATTTTAGTTTTTTTCCTTTTTCTTTTGTTCTCTGCCTTGGCTGGTAGGCTTGTG
TAAATGTTTTTTTTTTTTTTGAAACTTTCTTTGATGGTGTAATCTGGCCAGAAATGAAACAAAGAAAGTAGAAAC
Protein sequenceShow/hide protein sequence
MSSMGISCARVYVMKKKAEEKLQERIEQDRRDDPVKPSNSAHHGGAVAGKATSKVHPGAVFGVPVRSTNL