CuGenDBv2

Gene ID	Sed0009358
Organism	Sechium edule (Chayote v1)
Description	protein RDM16 isoform X2
Genome location	LG07:40084573..40087948
RNA-Seq Expression	Sed0009358
Synteny	Sed0009358
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
InterPro domains	IPR010541 - Domain of unknown function DUF1115 IPR013881 - Pre-mRNA-splicing factor 3 IPR027104 - U4/U6 small nuclear ribonucleoprotein Prp3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139030.1 protein RDM16 isoform X1 [Momordica charantia]

5.6e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

XP_022139031.1 protein RDM16 isoform X2 [Momordica charantia]

5.6e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

XP_022139032.1 protein RDM16 isoform X3 [Momordica charantia]

5.6e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

XP_022139033.1 protein RDM16 isoform X4 [Momordica charantia]

5.6e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

XP_022139034.1 protein RDM16 isoform X5 [Momordica charantia]

5.6e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CB57 protein RDM16 isoform X1

2.7e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

A0A6J1CBF9 protein RDM16 isoform X2

2.7e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

A0A6J1CBS3 protein RDM16 isoform X5

2.7e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

A0A6J1CCW0 protein RDM16 isoform X3

2.7e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

A0A6J1CEQ9 protein RDM16 isoform X4

2.7e-229

88.61

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGFRQDPEFAPLI+LFPGN+ATDVAVPQKP K PVLRLDALGREIDEQGNVVNI KPSNLSTLKVNINKQKKD+FQILKPEL+VDPESNPH+DERMGINK
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         KLLRPKRMNF+FVEEGKWSKEAETIKL+S+FGEAQAKERREKQAQLAKAKAA DINPNLIEVSERV VKEK KEPIPEIEWWDV LLH GTYD VGD F
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERV-VKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        VAND +RKDKITIYVEHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRR+AKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AHIDRNIARKLTPAERREKKERKLFDD  SLE  VSVYKI DLS   A  KV  NARENRLTGCAVI DGISVLVVEGG K IKRY KLML RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI
        +WAASVKE+   DESDDKPV++CSLVWQGSVAK SF+KFFI+ECMTEAAARK+FADAGVGHYWDLA+NFSDDQI
Subjt:  DWAASVKED---DESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDDQI

SwissProt top hits

e value

%identity

Alignment

O43395 U4/U6 small nuclear ribonucleoprotein Prp3

1.1e-65

38.57

Show/hide

Query:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK
        TK   L LD  GR +D  G  + +     + TLK NI   K++ F Q LK +   D ESN  +D R+ I      + +R  F+F ++GK+ K A+ ++ K
Subjt:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK

Query:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA
        +Q  + QA      +   A  K     +  L  ++ +  KE  +  IPEIEWWD +++  G            +  R+D   IT  VEHP  + PP ++ 
Subjt:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA

Query:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER
         P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +
Subjt:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER

Query:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS
        KL +D S    +SVY++ +LS      K+  NA +  LTG  V+   ++V+VVEGG K  K++ +LML RI W          +D+ESD+   K  ++C 
Subjt:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS

Query:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS
        LVW+G+    SF +   K+C TE  AR+ F   G  HYWDLA++ S
Subjt:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS

Q2KIA6 U4/U6 small nuclear ribonucleoprotein Prp3

1.1e-65

38.57

Show/hide

Query:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK
        TK   L LD  GR +D  G  + +     + TLK NI   K++ F Q LK +   D ESN  +D R+ I      + +R  F+F ++GK+ K A+ ++ K
Subjt:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK

Query:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA
        +Q  + QA      +   A  K     +  L  ++ +  KE  +  IPEIEWWD +++  G            +  R+D   IT  VEHP  + PP ++ 
Subjt:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA

Query:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER
         P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +
Subjt:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER

Query:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS
        KL +D S    +SVY++ +LS      K+  NA +  LTG  V+   ++V+VVEGG K  K++ +LML RI W          +D+ESD+   K  ++C 
Subjt:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS

Query:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS
        LVW+G+    SF +   K+C TE  AR+ F   G  HYWDLA++ S
Subjt:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS

Q5R5F1 U4/U6 small nuclear ribonucleoprotein Prp3

1.1e-65

38.57

Show/hide

Query:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK
        TK   L LD  GR +D  G  + +     + TLK NI   K++ F Q LK +   D ESN  +D R+ I      + +R  F+F ++GK+ K A+ ++ K
Subjt:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK

Query:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA
        +Q  + QA      +   A  K     +  L  ++ +  KE  +  IPEIEWWD +++  G            +  R+D   IT  VEHP  + PP ++ 
Subjt:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKD--KITIYVEHPRPIEPPAESA

Query:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER
         P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +
Subjt:  PPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKER

Query:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS
        KL +D S    +SVY++ +LS      K+  NA +  LTG  V+   ++V+VVEGG K  K++ +LML RI W          +D+ESD+   K  ++C 
Subjt:  KLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVK-----EDDESDD---KPVSRCS

Query:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS
        LVW+G+    SF +   K+C TE  AR+ F   G  HYWDLA++ S
Subjt:  LVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS

Q5ZJ85 U4/U6 small nuclear ribonucleoprotein Prp3

3.0e-68

39.37

Show/hide

Query:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK
        TK   L LD  GR +D  G  + +     + TLK NI   K++ F Q LK +   D ESN ++D R+ I   +  R KR  F+F E+GK+ K A+ ++ K
Subjt:  TKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSF-QILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKLK

Query:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKDK---ITIYVEHPRPIEPPAES
        +Q         ++ QA++++A     I+ +         KE  +  IPEIEWWD +++  G             + +KD+   IT  VEHP  + PP +S
Subjt:  SQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKDK---ITIYVEHPRPIEPPAES

Query:  APPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKE
          P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK 
Subjt:  APPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKE

Query:  RKLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASV-----KEDDESDD---KPVSRC
        +KL +D S    ++VY++ +LS      K+  NA +  LTG  V+   ++V+VVEGG K  K++ +LML RI W         ++DDESD+   K  ++C
Subjt:  RKLFDD-SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASV-----KEDDESDD---KPVSRC

Query:  SLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS
        SLVW+G+    SF +   K+C TE  AR+ F   G  HYWDLA++ S
Subjt:  SLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFS

Q9C7E7 Protein RDM16

6.3e-175

67.65

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGF QD EFAP+I+LFPG   +D+ V Q+P K PVLR+DALGREIDE GNV+++ KPSNLSTLKVNINK+KKD+FQILKP+L+ D + NP++D RMGI++
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVV-KEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         K+LRPKRM+F+FVEEGKW+++AE +K KS FGEA+AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD ++L  G Y  + D  
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVV-KEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        +    L+ +K+T Y+EHPRPIEPPAE+APPPPQPLKLTKKEQKKLRTQRR+AKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR A
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AH DRN ARKLTPAE+REKKERKLFDD  ++E  VSVYKI  LS      KV  NARENRLTGC+V++D +SV+VVEG  K IKRY KLM+ RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DW-AASVKEDDESDDKPV---SRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDD
        +W  A  KE +E +++ V   ++C LVWQGS+ K SF +F + EC+TE+ A+KVF DAGV HYWDLA+N+SDD
Subjt:  DW-AASVKEDDESDDKPV---SRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G28060.1 Pre-mRNA-splicing factor 3

4.5e-176

67.65

Show/hide

Query:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK
        MGF QD EFAP+I+LFPG   +D+ V Q+P K PVLR+DALGREIDE GNV+++ KPSNLSTLKVNINK+KKD+FQILKP+L+ D + NP++D RMGI++
Subjt:  MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINK

Query:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVV-KEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF
         K+LRPKRM+F+FVEEGKW+++AE +K KS FGEA+AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD ++L  G Y  + D  
Subjt:  IKLLRPKRMNFEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVV-KEKMKEPIPEIEWWDVHLLHFGTYDGVGDSF

Query:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA
        +    L+ +K+T Y+EHPRPIEPPAE+APPPPQPLKLTKKEQKKLRTQRR+AKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR A
Subjt:  VANDTLRKDKITIYVEHPRPIEPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAA

Query:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI
        AAERE+AH DRN ARKLTPAE+REKKERKLFDD  ++E  VSVYKI  LS      KV  NARENRLTGC+V++D +SV+VVEG  K IKRY KLM+ RI
Subjt:  AAERERAHIDRNIARKLTPAERREKKERKLFDD--SLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRI

Query:  DW-AASVKEDDESDDKPV---SRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDD
        +W  A  KE +E +++ V   ++C LVWQGS+ K SF +F + EC+TE+ A+KVF DAGV HYWDLA+N+SDD
Subjt:  DW-AASVKEDDESDDKPV---SRCSLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINFSDD

AT3G55930.1 Pre-mRNA-splicing factor 3

2.1e-85

45.07

Show/hide

Query:  KPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKL
        K TK  VLR+DALGREIDE GNV+++ KP N STL VNI                   ++ PH                                     
Subjt:  KPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINKIKLLRPKRMNFEFVEEGKWSKEAETIKL

Query:  KSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVG--DSFVANDTLRKDKITI-----YVEHPRPIE
                         +L+K  +                           EWWD  +L   T + +    + +  DT+ ++ + +     ++EHP PIE
Subjt:  KSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVG--DSFVANDTLRKDKITI-----YVEHPRPIE

Query:  PPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAER
        PPAE+A PPPQPLK+TK+E+KKLRT RR+AKE +++EMI QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAERE+AH+DRN+ARKLTPAE+
Subjt:  PPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAER

Query:  REKKERKLFDDS---LEKTVSVYKIN-DLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVKEDDESDDKPVSRC
        REKKERKLF D    +E  VSVYKIN  LS      KV  NA++N LTG +V+ DG+SV+VVEG  K I RY KLML RI+W  + K++DE ++   ++C
Subjt:  REKKERKLFDDS---LEKTVSVYKIN-DLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVKEDDESDDKPVSRC

Query:  SLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINF
         LVWQGSV K SF +F ++EC+T++ A+KVF DAGV HYWDLA+N+
Subjt:  SLVWQGSVAKCSFSKFFIKECMTEAAARKVFADAGVGHYWDLAINF

AT3G56790.1 RNA splicing factor-related

1.5e-14

Show/hide

Query:  PPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD
        PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Subjt:  PPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD

AT3G56790.1 RNA splicing factor-related

1.2e-08

59.68

Show/hide

Query:  VATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQ-ILKP
        +A D AV  K TK   LR+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Subjt:  VATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQ-ILKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGATTCCGCCAGGATCCAGAGTTTGCTCCTCTCATAAGTTTGTTTCCAGGGAATGTAGCCACTGATGTTGCTGTTCCACAGAAGCCGACCAAAGTTCCTGTTCTTCG
TCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAACGTTGTCAATATAGCCAAACCCAGCAACCTTAGCACTCTAAAGGTTAACATCAATAAACAGAAAAAGGACT
CATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCTGAATCAAATCCTCATTATGATGAGAGGATGGGTATAAATAAAATTAAACTGTTGAGGCCAAAGAGGATGAAT
TTCGAGTTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCCGAAACCATAAAATTGAAGAGTCAATTCGGAGAGGCACAAGCCAAAGAACGAAGGGAGAAGCAGGCACAATT
GGCGAAGGCAAAGGCTGCACAAGATATAAATCCGAATTTGATTGAAGTTTCTGAGAGAGTTGTGAAGGAAAAAATGAAAGAACCAATTCCTGAAATCGAGTGGTGGGATG
TCCATCTTTTGCATTTTGGCACATACGATGGTGTGGGAGATAGTTTTGTGGCCAATGACACATTAAGGAAAGATAAGATCACTATATACGTTGAGCATCCTCGTCCTATT
GAACCTCCTGCCGAGTCGGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAACAGAAAAAACTTCGTACGCAGCGTCGTATGGCGAAGGAGAAAGATAGGCA
GGAGATGATTAGACAAGGCCTGATAGAACCACCTAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCTGAAGCAACCCAAGACCCCACCAAACTTGAGA
AAGAGATTCGTGCTGCAGCTGCGGAGAGGGAACGTGCTCACATAGATAGAAATATTGCACGTAAACTGACCCCGGCAGAACGTCGTGAGAAGAAAGAACGTAAGCTTTTT
GACGATTCACTGGAGAAAACTGTGTCTGTTTACAAGATTAACGATTTATCACGCATGCCGGCCTGGTCTAAAGTCTCTCGTAATGCAAGAGAGAACCGTTTGACTGGATG
TGCTGTGATATCCGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGATGCAAACCCATCAAGAGGTATGCAAAGCTTATGCTGACGCGTATAGATTGGGCTGCTTCTGTGA
AAGAGGACGACGAAAGTGACGACAAGCCCGTTAGCAGATGTTCGTTGGTATGGCAAGGAAGTGTTGCAAAATGTAGCTTCAGTAAATTCTTTATCAAGGAGTGCATGACG
GAGGCAGCTGCTAGGAAGGTTTTTGCTGATGCTGGCGTTGGTCACTATTGGGATCTTGCCATTAACTTTTCCGACGATCAAATATAA

mRNA sequence

Show/hide mRNA sequence

CCATAATATTCCCCCAAAGCCCATCATAAACCCTAGAGAGACTTGAGCCGTGAAAATGGTTAGGGTTTCCGAGAAGGAGAAATCCGATCACTCTTCCCATCGCCGGCGGC
ACCACCGACCGGACCGTGATTCGAAGCGCCACAGCAAACACAGGCGCGATCGGGATTCATCGATTCGAGAGCGGTCGCAAGGATCGTTGGAGCTGATTCAGAATTCTGTG
AATTCTGTGCCTCGGAACAAGAGGAAGGTAAACGGAGAAAGTGAGGATATGTTCAATGGTGGTCACAAGAAGAGGGTTATGTCGATGGGGAATGCATCTATGGGTGAACC
TATTAATATGTCATTAGCAAGTGTGCCCCAGAATTTGTTACATCCTGGGCATTCCCATCCTATCAAGTACAGATGGGGCATCTTCGAAAGCTGGGAAAAGTGGAACTCTC
TCCCTGGATGCTTTAGTGAAAGCCAAGAAAGCTTTACAAATACGGAAAGAATTGACCGGGGGGCCAAGTTCTGCTGGTAGCTCAGTTGTGAAATCGGAAGAGAAAGCTAA
GCCATCATCAACTACAAGAGTGGCATCAAGTTCGTCGACCTTACCTTCTGCCATTGCACTTGGTGGTGGAATTAATGTTCCGGCTGGCTTTACCTCTATACCCCATTTTG
AAGCTGTCAAACGTGCACAGGAGCTTGCCGCCAGGATGGGATTCCGCCAGGATCCAGAGTTTGCTCCTCTCATAAGTTTGTTTCCAGGGAATGTAGCCACTGATGTTGCT
GTTCCACAGAAGCCGACCAAAGTTCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAACGTTGTCAATATAGCCAAACCCAGCAACCTTAGCAC
TCTAAAGGTTAACATCAATAAACAGAAAAAGGACTCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCTGAATCAAATCCTCATTATGATGAGAGGATGGGTATAA
ATAAAATTAAACTGTTGAGGCCAAAGAGGATGAATTTCGAGTTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCCGAAACCATAAAATTGAAGAGTCAATTCGGAGAGGCA
CAAGCCAAAGAACGAAGGGAGAAGCAGGCACAATTGGCGAAGGCAAAGGCTGCACAAGATATAAATCCGAATTTGATTGAAGTTTCTGAGAGAGTTGTGAAGGAAAAAAT
GAAAGAACCAATTCCTGAAATCGAGTGGTGGGATGTCCATCTTTTGCATTTTGGCACATACGATGGTGTGGGAGATAGTTTTGTGGCCAATGACACATTAAGGAAAGATA
AGATCACTATATACGTTGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGTCGGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAACAGAAAAAACTTCGT
ACGCAGCGTCGTATGGCGAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCTAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGG
CTCTGAAGCAACCCAAGACCCCACCAAACTTGAGAAAGAGATTCGTGCTGCAGCTGCGGAGAGGGAACGTGCTCACATAGATAGAAATATTGCACGTAAACTGACCCCGG
CAGAACGTCGTGAGAAGAAAGAACGTAAGCTTTTTGACGATTCACTGGAGAAAACTGTGTCTGTTTACAAGATTAACGATTTATCACGCATGCCGGCCTGGTCTAAAGTC
TCTCGTAATGCAAGAGAGAACCGTTTGACTGGATGTGCTGTGATATCCGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGATGCAAACCCATCAAGAGGTATGCAAAGCT
TATGCTGACGCGTATAGATTGGGCTGCTTCTGTGAAAGAGGACGACGAAAGTGACGACAAGCCCGTTAGCAGATGTTCGTTGGTATGGCAAGGAAGTGTTGCAAAATGTA
GCTTCAGTAAATTCTTTATCAAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGGTTTTTGCTGATGCTGGCGTTGGTCACTATTGGGATCTTGCCATTAACTTTTCCGAC
GATCAAATATAACCAAACTTGTGAACTGAAGCTCCGCTTTTTTTGGCGCTTGAGAAGTCCTAATCATAGATTTGCTTTGCTTCACATTTATTTATTTTTATTATTTTTAT
TTTTATTTTTATAGATGATGGGGCC

Protein sequence

Show/hide protein sequence

MGFRQDPEFAPLISLFPGNVATDVAVPQKPTKVPVLRLDALGREIDEQGNVVNIAKPSNLSTLKVNINKQKKDSFQILKPELDVDPESNPHYDERMGINKIKLLRPKRMN
FEFVEEGKWSKEAETIKLKSQFGEAQAKERREKQAQLAKAKAAQDINPNLIEVSERVVKEKMKEPIPEIEWWDVHLLHFGTYDGVGDSFVANDTLRKDKITIYVEHPRPI
EPPAESAPPPPQPLKLTKKEQKKLRTQRRMAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAERERAHIDRNIARKLTPAERREKKERKLF
DDSLEKTVSVYKINDLSRMPAWSKVSRNARENRLTGCAVISDGISVLVVEGGCKPIKRYAKLMLTRIDWAASVKEDDESDDKPVSRCSLVWQGSVAKCSFSKFFIKECMT
EAAARKVFADAGVGHYWDLAINFSDDQI

Sed0009358 (gene) of Chayote v1 genome