; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009378 (gene) of Chayote v1 genome

Gene IDSed0009378
OrganismSechium edule (Chayote v1)
Descriptionhybrid signal transduction histidine kinase L
Genome locationLG04:4840538..4841421
RNA-Seq ExpressionSed0009378
SyntenySed0009378
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648720.1 hypothetical protein Csa_008998 [Cucumis sativus]5.3e-4163.28Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K P          +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
XP_008446202.1 PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo]1.3e-4264Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K PP  +G   GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
XP_011655621.2 la-related protein Larp4B [Cucumis sativus]5.3e-4163.28Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K P          +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
XP_022151116.1 aspartate and glycine-rich protein-like [Momordica charantia]1.8e-4166.06Show/hide
Query:  QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE--KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFD
        + QQ  LVYP TA    +QPP SHH SNGSFGAVFIVLAVI+V+S LACFLGRLCNR VE  KP+PEK T    GG  P+GKE PK HP K+GDIEFGFD
Subjt:  QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE--KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFD

Query:  LKNPNGKDHKMPPPEHGGSKG---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        L+NPNGK  K P   +GGSKG   NG NG+G+G+GNG KPFENG  MRSE+K SDH +  FNFK+
Subjt:  LKNPNGKDHKMPPPEHGGSKG---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
XP_038892720.1 uncharacterized protein LOC120081701 [Benincasa hispida]6.7e-4467.26Show/hide
Query:  QQQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFD
        QQQQ QQ   VYP TA   GSQPP SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK T  G  PRGKEPKLHP+KEGDIEFGFD
Subjt:  QQQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFD

Query:  LKNPNGKDHKMPPP-EHGGSKG-NGPNGNG----NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        L+NPNG   K P    +GGSKG +  NGNG    NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  LKNPNGKDHKMPPP-EHGGSKG-NGPNGNG----NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
TrEMBL top hitse value%identityAlignment
A0A0A0KTP5 Uncharacterized protein1.2e-4161.5Show/hide
Query:  MSDFQQQQP------QQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHP
        MS+ QQQQP      QQ   VYP T AT  GSQ P  HH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP
Subjt:  MSDFQQQQP------QQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHP

Query:  EKEGDIEFGFDLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        +KEGDIEFGFDL+NP+GK  K P          +GGSKG G NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  EKEGDIEFGFDLKNPNGKDHKMPP-------PEHGGSKGNGPNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
A0A1S3BF63 hybrid signal transduction histidine kinase L6.2e-4364Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K PP  +G   GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
A0A5A7ST81 Hybrid signal transduction histidine kinase L6.2e-4364Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K PP  +G   GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
A0A6J1DDL5 aspartate and glycine-rich protein-like8.9e-4266.06Show/hide
Query:  QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE--KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFD
        + QQ  LVYP TA    +QPP SHH SNGSFGAVFIVLAVI+V+S LACFLGRLCNR VE  KP+PEK T    GG  P+GKE PK HP K+GDIEFGFD
Subjt:  QPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE--KPRPEKATQ---GGDPPRGKE-PKLHPEKEGDIEFGFD

Query:  LKNPNGKDHKMPPPEHGGSKG---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        L+NPNGK  K P   +GGSKG   NG NG+G+G+GNG KPFENG  MRSE+K SDH +  FNFK+
Subjt:  LKNPNGKDHKMPPPEHGGSKG---NGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
E5GBJ1 Uncharacterized protein6.2e-4364Show/hide
Query:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF
        QQQQ QQ   VYP T AT  GSQ P SHH SNGSFGAVFIVLAVI+VIS LACFLGRLCNR VE   +P+PEK+  G  P RGKEPKLHP+KEGDIEFGF
Subjt:  QQQQPQQTPLVYPIT-ATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVE---KPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGF

Query:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
        DL+NP+GK  K PP  +G   GNG      NGNG       NG+GN  KPFENGG  RSE+K +DH +  FNFK+
Subjt:  DLKNPNGKDHKMPPPEHGGSKGNG-----PNGNG-------NGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23530.1 unknown protein5.2e-1037.36Show/hide
Query:  MSDFQQQQPQQTPLVYPITAT----DPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNR--------GVEKPRPEKATQGGDPPRGKEP-K
        M D   QQ QQ  +VYP        DP ++P +S   S+G+FG VFIVLAVI V+S LAC  GRLCNR          + P+ EKA+      R   P +
Subjt:  MSDFQQQQPQQTPLVYPITAT----DPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNR--------GVEKPRPEKATQGGDPPRGKEP-K

Query:  LHPEKEGDIEFGFDLK------NPNGKDHKMPPPEHGGSKGNGPNGNGNGNGNGLKPFENGGAMRSEMKQS-DH
          P + GD++FGFD+K       P+G+D      E G     G  G   G G G  P     A+R ++ ++ DH
Subjt:  LHPEKEGDIEFGFDLK------NPNGKDHKMPPPEHGGSKGNGPNGNGNGNGNGLKPFENGGAMRSEMKQS-DH
AT1G70470.1 unknown protein3.8e-1338.51Show/hide
Query:  QQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEKPRPE---KATQGGDPPRGKEPKL-----HPEKEGDIE
        Q Q  Q P VYP T++   S    S   S+GSFG  FIVLA ILV++ LAC  GRLCNRG ++ + +   KA++   P   K  ++      P + GD+E
Subjt:  QQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEKPRPE---KATQGGDPPRGKEPKL-----HPEKEGDIE

Query:  FGFDLKNPNGKDHKMPPPEHGG-------SKGNGPNGNGNGNGNGLKP
        FGFD+K P       P   +GG       +K  G  G G G   G +P
Subjt:  FGFDLKNPNGKDHKMPPPEHGG-------SKGNGPNGNGNGNGNGLKP
AT1G74055.1 unknown protein1.3e-0538.57Show/hide
Query:  QQQPQQ-------TPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEK
        QQQPQQ       TP+    T  +  + P   +HYS+ S G  F V++V+++++VL+CFLGR C R  ++
Subjt:  QQQPQQ-------TPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACTTCCAACAGCAACAGCCACAGCAGACGCCTCTGGTTTATCCGATCACCGCGACCGACCCCGGCAGCCAGCCTCCAAACTCCCACCATTACTCCAACGGCTC
ATTCGGGGCAGTTTTTATAGTTCTTGCGGTTATTCTCGTCATATCGGTTCTCGCTTGCTTCCTCGGCCGCCTCTGCAACCGGGGAGTCGAAAAACCGAGGCCGGAGAAGG
CGACACAAGGCGGGGATCCCCCGAGAGGGAAAGAACCCAAATTGCACCCTGAAAAAGAAGGGGACATAGAATTTGGATTTGATTTGAAAAACCCAAATGGGAAAGATCAC
AAAATGCCACCTCCTGAACATGGAGGAAGCAAAGGAAATGGACCAAATGGCAATGGCAATGGCAATGGAAATGGCTTAAAGCCCTTTGAAAATGGCGGCGCAATGAGAAG
CGAAATGAAGCAATCTGATCATCGTCAGGTTCATTTCAACTTCAAATCTCGCCATGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTCTCTTCTTGCTTCCAACTCTTCACTAAATTCTTTCCTCTCCCTTCCCTCCCACTCAAAGAACCAATCAAAATCAGCTCTTCAAATACTAAAACCACTCCCCAGCTTCC
TTAATTTTTCCTAATCCCCATTAATCCAATTCCCAGCAACCTCGGCTCGACATGTCGGACTTCCAACAGCAACAGCCACAGCAGACGCCTCTGGTTTATCCGATCACCGC
GACCGACCCCGGCAGCCAGCCTCCAAACTCCCACCATTACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCGGTTATTCTCGTCATATCGGTTCTCGCTTGCT
TCCTCGGCCGCCTCTGCAACCGGGGAGTCGAAAAACCGAGGCCGGAGAAGGCGACACAAGGCGGGGATCCCCCGAGAGGGAAAGAACCCAAATTGCACCCTGAAAAAGAA
GGGGACATAGAATTTGGATTTGATTTGAAAAACCCAAATGGGAAAGATCACAAAATGCCACCTCCTGAACATGGAGGAAGCAAAGGAAATGGACCAAATGGCAATGGCAA
TGGCAATGGAAATGGCTTAAAGCCCTTTGAAAATGGCGGCGCAATGAGAAGCGAAATGAAGCAATCTGATCATCGTCAGGTTCATTTCAACTTCAAATCTCGCCATGTTT
GACACCACACTTGTAACACTAAACACAAATTCCTCTTAAGTTTTATATATATATAGCTGTCTTTGTGGATTTGATCTTTTGTTGTTATCTAATCACAACTTCGATTCAAT
CATTAATCTGTGATCATTTTTTTCAATTCTTAGTAGGAATTGTTGAAATTGTCTTCATCCAATATCTTTAAGCTCACGGCATCTTCCATTAAGGGATGCTTTTTTTTATT
TATT
Protein sequenceShow/hide protein sequence
MSDFQQQQPQQTPLVYPITATDPGSQPPNSHHYSNGSFGAVFIVLAVILVISVLACFLGRLCNRGVEKPRPEKATQGGDPPRGKEPKLHPEKEGDIEFGFDLKNPNGKDH
KMPPPEHGGSKGNGPNGNGNGNGNGLKPFENGGAMRSEMKQSDHRQVHFNFKSRHV