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Sed0009414 (gene) of Chayote v1 genome

Gene IDSed0009414
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG05:44288795..44289471
RNA-Seq ExpressionSed0009414
SyntenySed0009414
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571047.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4084.69Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF KKQSD VP+GHVAVYVGD +RKRFVVPVSYLNHPS QQLLNRV++EFGYHHP GGLTI CKE TFIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

KAG6571055.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4085.71Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF+KKQSD VPRGHVAVYVGD +RKRFVVPVSYLNHPS QQLLNRVE+EFGYHHP GGLTI CKE  FIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

XP_022146114.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.7e-4086.6Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        MGIRL SSLIPN KQILKMQLGF KKQSD VPRGHVAVYVGDI+RKRFVVPVS+LNHPS QQLLN+VE+EFG+HHP GGLTI CKED FIDLTSRLQ
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

XP_022986188.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]5.4e-4185.71Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF+KKQSD VPRGHVAVYVGD +R+RFVVPVSYLNHPS QQLLNRVE+EFGYHHP GGLTILC+E TFIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

XP_023512607.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]3.0e-3982.65Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MG+RL SSL+P  K+ILKMQLGF+KKQSD VPRGHVAVYVGD +RKRFVVPVSYLNHPS QQLLNR E+EFGYHHP GGLTI CKE  FIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

TrEMBL top hitse value%identityAlignment
A0A6J1CX72 auxin-responsive protein SAUR24-like1.3e-4086.6Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        MGIRL SSLIPN KQILKMQLGF KKQSD VPRGHVAVYVGDI+RKRFVVPVS+LNHPS QQLLN+VE+EFG+HHP GGLTI CKED FIDLTSRLQ
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

A0A6J1FVH8 auxin-responsive protein SAUR24-like4.2e-3983.67Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+   KQILKMQLGF+KKQSD VPRGHVAVYVGD +RKRFVVPVSYLNHPS QQLLNR E+EFGYHHP GGLTI CKE  FIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

A0A6J1FXZ4 auxin-responsive protein SAUR24-like1.9e-3983.67Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF+KKQSD VPRGH AVYVGDI+RKRFVV VSYLNHPS QQLLNRVE+EFGYHHP GGL I CKE  FIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

A0A6J1JC24 auxin-responsive protein SAUR24-like7.9e-3882.65Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF+KKQSD VPRGHVAVYVGD ++KRFVVPVSYLNHP  QQLLNRVE EFGYHHP GGLTI CKE  FID TSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

A0A6J1JFS6 auxin-responsive protein SAUR21-like2.6e-4185.71Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH
        MGIRL SSL+P  KQILKMQLGF+KKQSD VPRGHVAVYVGD +R+RFVVPVSYLNHPS QQLLNRVE+EFGYHHP GGLTILC+E TFIDLTSRLQH
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQH

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.4e-2065.15Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VP+SYLN PS Q LL++ EDEFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.6e-1962.12Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VP+SYL+ PS Q LL++ E+EFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR207.2e-2062.12Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VP+SYLN PS Q LL++ E+EFG+ HP GGLTI C EDTFI++TSR Q
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.1e-1962.12Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VP+SYL+ PS Q LL++ E+EFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.9e-2065.15Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VPVSYLN PS Q LL++ E+EFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT4G34790.1 SAUR-like auxin-responsive protein family1.6e-2250Show/hide
Query:  LLSSLIPNGKQILKMQLGFIKK----------QSDFVPRGHVAVYVGD-IERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLT
        L+ S++PN KQI K Q    K            S  VP+GHVAVYVG+ +E+KRFVVP+SYLNHP  ++ LNR E+E G+HH  GGLTI C+E++F+ L 
Subjt:  LLSSLIPNGKQILKMQLGFIKK----------QSDFVPRGHVAVYVGD-IERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLT

Query:  SRLQ
        +  Q
Subjt:  SRLQ

AT4G34800.1 SAUR-like auxin-responsive protein family1.0e-2156.38Show/hide
Query:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGD--IERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDL
        M IRL  S + N KQ         +KQ   VP+GHVAVYVG+    +KRFVVP+SYLNHPS Q LL+R E+EFG++HP GGLTI C+E+TF+ L
Subjt:  MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGD--IERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDL

AT4G34810.1 SAUR-like auxin-responsive protein family7.1e-2355.91Show/hide
Query:  KQILKM-----QLGFIKKQSDFVPRGHVAVYVG---DIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDL-TSRLQ
        KQILK+     +       SD VP+GHVAVYVG   ++E+KRFVVP+S+LNHPS ++ L+R E+EFG++HP GGLTI C+E+ F+DL  SRLQ
Subjt:  KQILKM-----QLGFIKKQSDFVPRGHVAVYVG---DIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDL-TSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.0e-2165.15Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VP+SYLN PS Q LL++ EDEFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2165.15Show/hide
Query:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ
        P+G +AVYVG+ ++KR++VPVSYLN PS Q LL++ E+EFG+ HP GGLTI C EDTFI++TSRLQ
Subjt:  PRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGTTTGCTATCATCCCTGATTCCTAATGGCAAGCAAATTCTAAAGATGCAGTTGGGATTTATCAAGAAGCAGTCTGATTTTGTTCCTAGAGGTCATGTTGC
AGTGTACGTGGGAGATATCGAAAGGAAGCGATTTGTTGTTCCTGTTTCATACTTGAACCATCCTTCATCCCAACAATTACTCAACCGAGTAGAAGACGAGTTTGGTTACC
ATCATCCATGGGGAGGTCTAACAATTCTTTGCAAAGAGGACACCTTCATCGATCTTACTTCTAGATTGCAACACTTTTGA
mRNA sequenceShow/hide mRNA sequence
GGGTCCTCTCAGTCTCGAGCTACCAATTCGAGGGTGGTCCACTTTTAAGTTCATTGGAATTCTCAGGCAACTTCTTTTTTTAATAGGTCTATAAGTGTATAGATCATAAA
CGAGTTTCAAGTACCAGATTGAACTTTGATATTCTAGAATTCTACTTCCAACTCCTTTGACGCAAGTTTTAACTTCAGAACTGTTTTTAGTCTTTCAATTATTGAAAATA
GATCAGCAATGGGGATTCGTTTGCTATCATCCCTGATTCCTAATGGCAAGCAAATTCTAAAGATGCAGTTGGGATTTATCAAGAAGCAGTCTGATTTTGTTCCTAGAGGT
CATGTTGCAGTGTACGTGGGAGATATCGAAAGGAAGCGATTTGTTGTTCCTGTTTCATACTTGAACCATCCTTCATCCCAACAATTACTCAACCGAGTAGAAGACGAGTT
TGGTTACCATCATCCATGGGGAGGTCTAACAATTCTTTGCAAAGAGGACACCTTCATCGATCTTACTTCTAGATTGCAACACTTTTGAAGGACGAAGATGATAAGGAATA
GGCTGTATTTTTTACATATTTTTTTCCCCTAACTTGTTTTCTTTCTAACTCCTGTGTTGGGTAGAAATCCAATCTCAAGCATTGTGTAATGTAAATGAATTTCTTTGCTA
TTTAATTACTTATCAAA
Protein sequenceShow/hide protein sequence
MGIRLLSSLIPNGKQILKMQLGFIKKQSDFVPRGHVAVYVGDIERKRFVVPVSYLNHPSSQQLLNRVEDEFGYHHPWGGLTILCKEDTFIDLTSRLQHF