CuGenDBv2

Gene ID	Sed0009424
Organism	Sechium edule (Chayote v1)
Description	protein SLOW GREEN 1, chloroplastic-like
Genome location	LG14:4573927..4575257
RNA-Seq Expression	Sed0009424
Synteny	Sed0009424
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595296.1 protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-123

70.75

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F SPPPSRLRSP SFRSLSVKA      +D+ + NAK S+S+TTN  LLSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   E+ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLAM++EQLNDNSLKGVAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIY+LL+K+ EAE QFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E  GLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

KAG7027307.1 protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-123

70.59

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F SPPPSRLRSP SFRSLSVKA      +D+ + NAK S+S+TTN  LLSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   E+ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLAM++EQLNDNSLKGVAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGL
        CQGIIY+LL+K+ EAE QFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E AG+
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGL

XP_022962798.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata]

1.2e-124

71.03

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F SPPPSRLRSP SFRSLSVKA      +D+ + NAK S+S+TTN  LLSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   E+ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLA+++EQLNDNSLKGVAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIY+LL+K+ EAEKQFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E AGLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

XP_023517061.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo]

2.7e-124

71.03

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F SPPP RLRSP SFRSLSVKA      +D+ + NAK S+S+TTN  LLSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   E+ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLAM++EQLNDNSLKGVAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIY+LL+K+ EAEKQFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E AGLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

XP_038883735.1 protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida]

1.3e-126

73.54

Show/hide

Query:  MESLTTFRHRL-PSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        MESL T  HR  PS +  S SHR P  S PISSLSF+SPPPS LRS  SFRSLSVKA      +D+   N KSS+S+TTN  LLSG +KTACISVAAAAF
Subjt:  MESLTTFRHRL-PSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAVAVAVP  P TT   E+T+EST  EE          DD N+ EALRSLVEE VK GKL EA+E LNRLIE+EPND EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AKN+FE ILAEDPFRVEAYHGLAM+AEQLNDNSLK VAKRI+EAME CKK +  SDIRDFKLLVAQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIYTLL+K+ EAEKQFEKFRRLVPK+HP+KEYFDEN+FA+KLFAQK+E E AGLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CRU6 protein SLOW GREEN 1, chloroplastic-like

2.4e-118

69.25

Show/hide

Query:  MESLTTFRHRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAA---------DQAAPNAKSSVSDTTNGALLSGLIKTACISVAAA
        MESL    HRL +    SFSHR P  SNPISSLSF++PPPS LRSP SFRSLSV A+          Q   NAKSSVS+T N    +G ++TACIS+AAA
Subjt:  MESLTTFRHRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAA---------DQAAPNAKSSVSDTTNGALLSGLIKTACISVAAA

Query:  AFFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEE---------KDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSH
        AFF LRFDHR AVAV     PV   T E+TEES   EE         KDDSN+ EALRSLVE NVK GKL EA++ LNRLIE+EPNDREL +LRANLHS 
Subjt:  AFFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEE---------KDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSH

Query:  MGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRP
        MG  E AKN+FE ILAEDP RVEAYHGLAM++EQLNDNSLK V+KRI+EA+E CKK DS SDIRDFKLLVAQIKVMEGSY++ALKAYQELV+EEPRDFRP
Subjt:  MGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRP

Query:  YLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        YLCQGIIYTLL+K+ EAEKQF+KFRRLVPK+HP+KEYFD+N+FA+K+F+QK+E E AGLKS
Subjt:  YLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

A0A6J1GF65 protein SLOW GREEN 1, chloroplastic-like

3.7e-119

69.72

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAA
        MESL T  HR  PSQ+  SFSHR P    PISSLSF   PP+RLRS  SFRSLSVKA      +D+ + NAKSS+S+T NG LLSG +KTACISV AAAA
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAA

Query:  FFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM
        F+ LRFDHRR VAVAV   PV + T E+T+EST  EE          DDS+ AE LRSLVEENVK GKL EAIETL+RLIE+EPNDREL LLRAN+ S+ 
Subjt:  FFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM

Query:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY
        G  E A+N+FE IL EDPFRVEAYHGL M++EQLNDNSLK V KRI+EA+E CKK +  S IRDFKLL+AQIKVM+GSYF+ALKAY ELV+EEP+DFRPY
Subjt:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY

Query:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        LCQGIIYTLL+K+ EAEKQFEKFRRLVPK+HP+KEYFDEN+FA+KLFAQK+E E+AGLKS
Subjt:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

A0A6J1HFV1 protein SLOW GREEN 1, chloroplastic-like

6.0e-125

71.03

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F SPPPSRLRSP SFRSLSVKA      +D+ + NAK S+S+TTN  LLSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   E+ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLA+++EQLNDNSLKGVAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIY+LL+K+ EAEKQFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E AGLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

A0A6J1I5P2 protein SLOW GREEN 1, chloroplastic-like

7.3e-123

70.19

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF
        ME L TF HR LPSQ+  SFS R P  S P SSL F+SPP SRLRSP SFRSLSVKA      +D+ + NAK S+S+TTN   LSG ++TACISVAAAAF
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAF

Query:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG
        F LRFDHRRAV VA P  P  T   ++ EES P EE          D+SN+ EALRSLVEENVK GKL EAIE LNRLIEIEPN+ EL LLRAN HS+MG
Subjt:  FVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMG

Query:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL
          E AK++FE IL EDP RVEAYHGLAM++EQLNDNSLK VAKRI++AME CKK +  SDIRDFKLL+AQIKVMEGSYF+ALKAYQELV+EEPRDFRPYL
Subjt:  AFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYL

Query:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        CQGIIY+LL+K+ EAEKQFEKFRRLVPK+HP++EYFDEN+FA+KLF QK+E E AGLKS
Subjt:  CQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

A0A6J1IQW2 protein SLOW GREEN 1, chloroplastic-like

4.0e-121

70.83

Show/hide

Query:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAA
        MESL T  HR  PSQ+  SFSHR P    PISSLSF   PP+RLRS  SFRSLSVKA      +D+ + NAKSS+S+TTNG LLSG +KTACISV AAAA
Subjt:  MESLTTFRHR-LPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKA------ADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAA

Query:  FFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM
        F+ LRFDHRR VAVAVP  PVTT   E+T+EST  EE          DD   AE LRSLVEENVK GKL EAIETL+RLIEIEPNDREL LLRAN+ S+ 
Subjt:  FFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEK---------DDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM

Query:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY
        G  E AKN+FE IL EDPFRVEAYHGL M++EQLNDNSLK V KRI+EAME CKK +  S IRDFKLL+AQIKVM+GSYF+ALKAY ELV+EEP+DFRPY
Subjt:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY

Query:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS
        LC+GIIYTLL+K+ EAEKQFEKFRRLVPK+HP+KEYFDEN+FA+KLFAQK+E E+AGLKS
Subjt:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERAGLKS

SwissProt top hits

e value

%identity

Alignment

Q9LS48 protein SLOW GREEN 1, chloroplastic

1.4e-30

37.27

Show/hide

Query:  ETTEESTPCEEKDDS--NEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQ
        E   E TP  E  DS     E LRSL+++ +++G+  EA++ L RL+  +P + E   L A L   MG  E+A+  FE IL  +P   EA    A+L ++
Subjt:  ETTEESTPCEEKDDS--NEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQ

Query:  LNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPF
          + +   V +R+++A+   +      + RD +L++AQI  ++ +  EALK+Y++L KE+P+DFRPY C+G+IY+LL K+ EA++QF K+R L PK    
Subjt:  LNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPF

Query:  KEYFDENLFASKLFAQKVEN
        + Y    L   KLF    EN
Subjt:  KEYFDENLFASKLFAQKVEN

Arabidopsis top hits

e value

%identity

Alignment

AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.4e-72

48.72

Show/hide

Query:  MESLTTFR-HRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACIS-VAAAAFFVLRF
        MESL   + H+ P+    SF+H         SS S +S P    RS  SF+ +S+KA+   + ++K S+            +K+ C+S  AAAA F++  
Subjt:  MESLTTFR-HRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACIS-VAAAAFFVLRF

Query:  DHRRAVAVAVP--------SPPVTTGTAETTEESTPCEE--KDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFES
          + + A+A P        S   + G     EE    EE      ++ EALRSL+E  +K  KL EAIE ++RLIE+EP ++E  +L+AN+ S+ G  ES
Subjt:  DHRRAVAVAVP--------SPPVTTGTAETTEESTPCEE--KDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFES

Query:  AKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGI
        AK  FE IL +DP RVEAYHGL M      D+ L  V KRI+EAM  CKK  +  D+RDFKLLVAQI+V+EG + EALK Y+ELVKEEPRDFRPYLCQGI
Subjt:  AKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGI

Query:  IYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERA
        IYT+LKK  EAEKQFEKFRRLVPK+HP++EYF +N+ ASKLFA+KV+ E A
Subjt:  IYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKVENERA

AT3G09490.1 Tetratricopeptide repeat (TPR)-like superfamily protein

5.1e-36

39.86

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Query:  PSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAAFFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEKDDSNEAEA
        PS+L  P  FR    K+     P  ++S S + +    S L+KT  IS+ AAAA F   F      A   P         ETT E      +  SN+  A
Subjt:  PSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISV-AAAAFFVLRFDHRRAVAVAVPSPPVTTGTAETTEESTPCEEKDDSNEAEA

Query:  LRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDN-SLKGVAKRIKEAMENCK
        L  L E   K  K  +AI  L+RLIEIEP +R+   ++A + S+ G  ESA   FE IL +DP RV+AYH L M  E  N    L  + KRI + +  CK
Subjt:  LRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDN-SLKGVAKRIKEAMENCK

Query:  KLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKE
        K     +I  F++L+AQI+ +EG   EA++  +ELVKE+P DF  YL QG++YTL+ K  EA KQFE   R++P++HP +E
Subjt:  KLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKE

AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.1e-65

47.21

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Query:  SRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDHRRAVAVAVP-SPPVTTGTAETT---EESTPCEEK--DDSN
        S ++   S +S S+KA+     N+ + +  +T       L K+ CI++  AA  +L   H ++ A+A P +PP +  + E     EE    +E      +
Subjt:  SRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDHRRAVAVAVP-SPPVTTGTAETT---EESTPCEEK--DDSN

Query:  EAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAME
        + +ALRSL+E  +K  KL+EA+E ++RLI++EP ++E  +L+AN+ ++ G  + AK  FE ILA+DP RVEAYHGL M         LK V  RI+EAM 
Subjt:  EAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAME

Query:  NCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKV
         CKK ++ +D RDFKLLVAQI+V+EG + EALK YQELVKEEPRDFRPYLCQGIIYTLLKK  +AE+QF+ FR+LVPK+HP++EYF +N+ A+KLF++K 
Subjt:  NCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLFAQKV

Query:  ENERA
        + E A
Subjt:  ENERA

AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.7e-29

30.67

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Query:  FRHRLPSQRRRSFSHRPPPCSNPISSLSFQ----SPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDHRR
        F HR    R +S    P    NP +   F+     P   RL  P +F            P  +SS S  ++   +  L + A I +   +F  L F   +
Subjt:  FRHRLPSQRRRSFSHRPPPCSNPISSLSFQ----SPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDHRR

Query:  AVAVAVPSPPVTTGTAETTEESTPCEEKDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPF
          A+A+P+  V +      E+      +++    EA++++V + ++ GK  +A++ + +L+++EP++ E  LL A  +  MG    AK  ++ IL E P 
Subjt:  AVAVAVPSPPVTTGTAETTEESTPCEEKDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPF

Query:  RVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQ
         + A HGLAM+  + +D S   V   + EAME  ++ +  ++ R+ ++L+ Q+ ++EG + E LK +Q++V + PRDFRPYLCQGI+Y+L+ K  EA +Q
Subjt:  RVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQ

Query:  FEKFRRLVPKDHPFKEYFDENLFASK
        FE +  LVP + P K + D+   A++
Subjt:  FEKFRRLVPKDHPFKEYFDENLFASK

AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

6.2e-58

41.71

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Query:  MESLTTFRHRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDH
        M SL  F +   +   R  +HR P    P+S      PPPSR+    SF S           N K S             +KT C+++  AA  +    H
Subjt:  MESLTTFRHRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDH

Query:  R-----RAVAVAVPSPPVTTGTAETTEE--STPCEEKDDS----------NEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM
               A  +  P PP +T    T+++  S P EE++++          N+ EAL+SL++   +   +  A+E LNRLIEI+P ++E  +L+A + ++ 
Subjt:  R-----RAVAVAVPSPPVTTGTAETTEE--STPCEEKDDS----------NEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHM

Query:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY
        G F+SA   FE +L++DPFRVEAYHGL M A   +++ L  +  RI EA+E CKK ++  D RDF LL+AQI+V++G+  EAL+ YQELVK+EP+DFRPY
Subjt:  GAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDNSLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPY

Query:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDEN-LFASKLFAQ
        LCQG+IYTL+KK  EAEKQF +FRRLVP++HP+KEY D N L  +KLFA+
Subjt:  LCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDEN-LFASKLFAQ

Sequences

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CDS sequence

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ATGGAGTCTCTTACAACATTTCGCCACCGTCTTCCTTCTCAACGGCGTCGATCCTTCAGCCACCGCCCTCCGCCGTGTTCGAATCCCATTTCTTCTCTCTCGTTCCAGTC
TCCGCCGCCGTCTCGGCTCCGTTCTCCGCCGTCTTTCCGGTCACTTTCTGTGAAAGCCGCCGACCAAGCCGCTCCAAACGCGAAATCTTCAGTTTCCGACACCACAAATG
GCGCCCTTCTGTCTGGATTAATCAAAACCGCTTGCATCTCCGTCGCCGCCGCTGCATTCTTCGTTCTTCGTTTCGACCATCGACGCGCGGTTGCTGTTGCTGTTCCGTCG
CCGCCGGTGACGACGGGGACGGCGGAGACTACTGAAGAATCGACGCCATGTGAGGAAAAGGATGATTCGAACGAAGCCGAAGCCCTACGATCTCTCGTTGAGGAGAATGT
AAAAGAAGGTAAACTCTCCGAAGCAATTGAAACCCTAAATCGTTTGATTGAAATTGAGCCTAATGACCGTGAGTTGCTGTTGCTGAGAGCCAATTTACATAGCCATATGG
GGGCTTTCGAATCGGCAAAAAACGATTTCGAGGCGATTTTAGCGGAAGATCCCTTTCGTGTTGAGGCCTACCATGGCCTTGCAATGCTGGCTGAGCAATTGAATGATAAT
TCATTGAAGGGCGTTGCGAAAAGGATCAAGGAGGCAATGGAGAATTGTAAGAAACTGGATAGCGATTCGGATATTAGGGATTTCAAGCTCTTGGTTGCGCAAATTAAGGT
TATGGAAGGAAGCTATTTTGAAGCATTGAAAGCTTATCAAGAACTTGTGAAGGAGGAGCCAAGGGATTTTAGGCCATATCTGTGTCAGGGGATTATATACACTCTGTTGA
AGAAGAGTGGCGAAGCTGAGAAACAATTTGAGAAGTTTAGGAGACTTGTTCCAAAGGATCATCCTTTCAAAGAGTACTTTGATGAAAACTTGTTTGCATCAAAGCTTTTT
GCTCAGAAAGTAGAGAATGAGAGAGCTGGTTTGAAGAGCTGA

mRNA sequence

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GTTCTTCACAAAGCTAAGCAAAGATAACATCCATGGAGTCTCTTACAACATTTCGCCACCGTCTTCCTTCTCAACGGCGTCGATCCTTCAGCCACCGCCCTCCGCCGTGT
TCGAATCCCATTTCTTCTCTCTCGTTCCAGTCTCCGCCGCCGTCTCGGCTCCGTTCTCCGCCGTCTTTCCGGTCACTTTCTGTGAAAGCCGCCGACCAAGCCGCTCCAAA
CGCGAAATCTTCAGTTTCCGACACCACAAATGGCGCCCTTCTGTCTGGATTAATCAAAACCGCTTGCATCTCCGTCGCCGCCGCTGCATTCTTCGTTCTTCGTTTCGACC
ATCGACGCGCGGTTGCTGTTGCTGTTCCGTCGCCGCCGGTGACGACGGGGACGGCGGAGACTACTGAAGAATCGACGCCATGTGAGGAAAAGGATGATTCGAACGAAGCC
GAAGCCCTACGATCTCTCGTTGAGGAGAATGTAAAAGAAGGTAAACTCTCCGAAGCAATTGAAACCCTAAATCGTTTGATTGAAATTGAGCCTAATGACCGTGAGTTGCT
GTTGCTGAGAGCCAATTTACATAGCCATATGGGGGCTTTCGAATCGGCAAAAAACGATTTCGAGGCGATTTTAGCGGAAGATCCCTTTCGTGTTGAGGCCTACCATGGCC
TTGCAATGCTGGCTGAGCAATTGAATGATAATTCATTGAAGGGCGTTGCGAAAAGGATCAAGGAGGCAATGGAGAATTGTAAGAAACTGGATAGCGATTCGGATATTAGG
GATTTCAAGCTCTTGGTTGCGCAAATTAAGGTTATGGAAGGAAGCTATTTTGAAGCATTGAAAGCTTATCAAGAACTTGTGAAGGAGGAGCCAAGGGATTTTAGGCCATA
TCTGTGTCAGGGGATTATATACACTCTGTTGAAGAAGAGTGGCGAAGCTGAGAAACAATTTGAGAAGTTTAGGAGACTTGTTCCAAAGGATCATCCTTTCAAAGAGTACT
TTGATGAAAACTTGTTTGCATCAAAGCTTTTTGCTCAGAAAGTAGAGAATGAGAGAGCTGGTTTGAAGAGCTGAGATTAGTGCTGTGACCTGCTGCTTCTGTATGAGTTA
TCCCCTTACTCTTCTCTGATATTCTGAGTAGATTCATTTTTGTTAGTTGTTTTGTGGTTTAGTAGATTCATTAGGGTGGTTTTATATATCTAAACATTTTGTTAAGAGTT
TTATGGTTGTCTGAATCTTTCAACTGAGTTTCCAAGGGAGAATACTGATTATACTTATGTTGTTCTGAAAGTTGCTTTCTTTTGAATTCAACAAGAATGGGGGAAAGAAT
GGGATTCGAAC

Protein sequence

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MESLTTFRHRLPSQRRRSFSHRPPPCSNPISSLSFQSPPPSRLRSPPSFRSLSVKAADQAAPNAKSSVSDTTNGALLSGLIKTACISVAAAAFFVLRFDHRRAVAVAVPS
PPVTTGTAETTEESTPCEEKDDSNEAEALRSLVEENVKEGKLSEAIETLNRLIEIEPNDRELLLLRANLHSHMGAFESAKNDFEAILAEDPFRVEAYHGLAMLAEQLNDN
SLKGVAKRIKEAMENCKKLDSDSDIRDFKLLVAQIKVMEGSYFEALKAYQELVKEEPRDFRPYLCQGIIYTLLKKSGEAEKQFEKFRRLVPKDHPFKEYFDENLFASKLF
AQKVENERAGLKS

Sed0009424 (gene) of Chayote v1 genome