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Sed0009463 (gene) of Chayote v1 genome

Gene IDSed0009463
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationLG09:1502550..1502813
RNA-Seq ExpressionSed0009463
SyntenySed0009463
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0848.86Show/hide
Query:  MAKLED-----YCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGS----------------------QFEVAMHEVPSGPNPTSNK
        MAK ED        TSTKSQACFFLF+L+L    VP+RFST P+  +                      QFE +MHEVPSGPNPTSNK
Subjt:  MAKLED-----YCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGS----------------------QFEVAMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0743.96Show/hide
Query:  MAKLEDY----CLTSTKSQACFFLFVLILVPHRFSTVPNLGS------------------------------QFEVAMHEVPSGPNPTSNK
        MA+L+++     LTSTKS+ACFFLF L+L+P+ FST+P+  S                              QFE AMHEVPSGPNPT+NK
Subjt:  MAKLEDY----CLTSTKSQACFFLFVLILVPHRFSTVPNLGS------------------------------QFEVAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.9e-0962.86Show/hide
Query:  MAK-LEDYCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGSQ--------FEVAMHEVPSGPNPTSNK
        MAK  EDY     KSQACFFLF+L+L    VPHR STVPN  S+        FE AMHEVPSGPNPTSNK
Subjt:  MAK-LEDYCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGSQ--------FEVAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein9.0e-1062.86Show/hide
Query:  MAK-LEDYCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGSQ--------FEVAMHEVPSGPNPTSNK
        MAK  EDY     KSQACFFLF+L+L    VPHR STVPN  S+        FE AMHEVPSGPNPTSNK
Subjt:  MAK-LEDYCLTSTKSQACFFLFVLIL----VPHRFSTVPNLGSQ--------FEVAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACTTGAAGATTATTGCTTAACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCGTCCTCATCCTCGTTCCTCATCGCTTCTCGACCGTGCCAAACTTGGG
CTCGCAATTTGAAGTAGCTATGCATGAAGTTCCCAGTGGCCCAAATCCCACATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACTTGAAGATTATTGCTTAACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCGTCCTCATCCTCGTTCCTCATCGCTTCTCGACCGTGCCAAACTTGGG
CTCGCAATTTGAAGTAGCTATGCATGAAGTTCCCAGTGGCCCAAATCCCACATCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MAKLEDYCLTSTKSQACFFLFVLILVPHRFSTVPNLGSQFEVAMHEVPSGPNPTSNK