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Sed0009467 (gene) of Chayote v1 genome

Gene IDSed0009467
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG13:4514301..4514755
RNA-Seq ExpressionSed0009467
SyntenySed0009467
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577059.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2386.96Show/hide
Query:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSLLRDSSFKEFQRVLREMARVD
        A+STRVVIIDTKYV TDAKSFKTVVQKLTGKDPVAEE+RH  G R+SSLLRDSSFKEFQRVLREM R+D
Subjt:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSLLRDSSFKEFQRVLREMARVD

KAG6600481.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2177.63Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP AEE+R   GG SS L + DSSFK+FQ  LREM  + R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR

XP_022142787.1 VQ motif-containing protein 10-like [Momordica charantia]2.2e-2182.89Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEEDRHHSGG--RSSSLLRDSSFKEFQRVLREMAR
        M+GGEA STRVVIIDTKYVHTDAKSFKTVVQKLTGKDP   AEEDR   GG   SSSL RDSSFKEFQRVLREMA+
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEEDRHHSGG--RSSSLLRDSSFKEFQRVLREMAR

XP_022942030.1 VQ motif-containing protein 1 [Cucurbita moschata]8.2e-2177.63Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  EE+R  SGG SS L + DSSFK+FQ  LREM  + R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR

XP_038889427.1 VQ motif-containing protein 1-like [Benincasa hispida]1.3e-2184.29Show/hide
Query:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGG-RSSSLLRDSSFKEFQRVLREMARVD
        AHSTRVVIIDTKYV TDAKSFKTVVQKLTGKD VAEE+  H+GG R+S LLRDSSFKEFQRVLREM R+D
Subjt:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGG-RSSSLLRDSSFKEFQRVLREMARVD

TrEMBL top hitse value%identityAlignment
A0A0A0KXJ0 VQ domain-containing protein6.3e-1980.56Show/hide
Query:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKD---PVAEEDRHHSG-GRSSSLLRDSSFKEFQRVLREMARVD
        HSTRVVIIDTKYV TDAKSFKTVVQKLTGKD    VAEE R  +G  R+SSLLRDSSFKEFQRVLREM R+D
Subjt:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKD---PVAEEDRHHSG-GRSSSLLRDSSFKEFQRVLREMARVD

A0A0L9UJH2 VQ domain-containing protein6.3e-1154.88Show/hide
Query:  MMSGGEAHS-TRVVIIDTKYVHTDAKSFKTVVQKLTGKD-----PVAEEDRHHSGGRSSS-LLRDSSFKEFQRVLREMARVD
        M +GG +    +VVII+T+YV TDA SFK+VVQKLTGKD     P A+ +RH  GG   S L+RD SFKEF R+LREM  ++
Subjt:  MMSGGEAHS-TRVVIIDTKYVHTDAKSFKTVVQKLTGKD-----PVAEEDRHHSGGRSSS-LLRDSSFKEFQRVLREMARVD

A0A5A7VBD1 VQ motif-containing protein 1-like3.1e-1879.17Show/hide
Query:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKD---PVAEEDRHHSG-GRSSSLLRDSSFKEFQRVLREMARVD
        HSTRVVIIDTKYV TDAKSFKTVVQKLTGKD    V EE R  +G  R+SSLLRDSSFKEFQRVLREM R+D
Subjt:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKD---PVAEEDRHHSG-GRSSSLLRDSSFKEFQRVLREMARVD

A0A6J1CNV7 VQ motif-containing protein 10-like1.0e-2182.89Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEEDRHHSGG--RSSSLLRDSSFKEFQRVLREMAR
        M+GGEA STRVVIIDTKYVHTDAKSFKTVVQKLTGKDP   AEEDR   GG   SSSL RDSSFKEFQRVLREMA+
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEEDRHHSGG--RSSSLLRDSSFKEFQRVLREMAR

A0A6J1FVF7 VQ motif-containing protein 14.0e-2177.63Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  EE+R  SGG SS L + DSSFK+FQ  LREM  + R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSL-LRDSSFKEFQRVLREMARVDR

SwissProt top hitse value%identityAlignment
Q1G3U8 VQ motif-containing protein 12.9e-0545.1Show/hide
Query:  MMSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGR
        M +G  +   +VV I+T+YV TDA+SFKT+VQ+LTGK+ V  +  +   G+
Subjt:  MMSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGR

Arabidopsis top hitse value%identityAlignment
AT1G17147.1 VQ motif-containing protein2.1e-0645.1Show/hide
Query:  MMSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGR
        M +G  +   +VV I+T+YV TDA+SFKT+VQ+LTGK+ V  +  +   G+
Subjt:  MMSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGR

AT1G78410.1 VQ motif-containing protein8.8e-0534.83Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEEDRH-HSGGRSSSLLRDSSFKEFQRVLREMARVD
        +VV I+T+YV TDA+SFKTVVQ+LTGK+                        + E+ R  H GG      R  +  EF R+ +EM  ++
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEEDRH-HSGGRSSSLLRDSSFKEFQRVLREMARVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCAGGTGGCGAAGCTCATTCGACTAGGGTTGTGATCATTGACACCAAGTATGTCCACACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACCGGGAA
AGATCCGGTGGCAGAGGAGGACCGACATCACAGTGGCGGTCGGAGCTCGAGTCTTTTGAGGGATTCATCGTTTAAGGAGTTTCAAAGAGTGCTGCGAGAGATGGCTAGAG
TTGATCGATGA
mRNA sequenceShow/hide mRNA sequence
ATAAAAACCATTAACCCTTTCCATTAAAACTCCAAACCCCATCAAAACCCACTTCTCAAAATCCTTCCTTTTTGCTTTCAAATTCTCCCGAACCCGAAAAGCTCTCGAAT
TTCACCATGATGTCAGGTGGCGAAGCTCATTCGACTAGGGTTGTGATCATTGACACCAAGTATGTCCACACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGAC
CGGGAAAGATCCGGTGGCAGAGGAGGACCGACATCACAGTGGCGGTCGGAGCTCGAGTCTTTTGAGGGATTCATCGTTTAAGGAGTTTCAAAGAGTGCTGCGAGAGATGG
CTAGAGTTGATCGATGAGCTTTGTTACTTAGTATTATTGATACCCTTTTTAATATTGATTTATTGCTTCTTTTTTTCTTTTTTTTTTTTGTCTTTTTGACCCTTTTGTTT
TGGTTATTTATGCGT
Protein sequenceShow/hide protein sequence
MMSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEEDRHHSGGRSSSLLRDSSFKEFQRVLREMARVDR