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Sed0009470 (gene) of Chayote v1 genome

Gene IDSed0009470
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:35892958..35895324
RNA-Seq ExpressionSed0009470
SyntenySed0009470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035148.1 uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa]1.1e-3284.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

KAG7036645.1 hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3082.98Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSE-DDDEITEKPQVKSKKTKVT
        MDA+ QE     PRVKASFRLGSE HLVNT NKGTLSEQL+SMKEESMAILKEYIT HNVPNDVPDEL+EE SE DDDE TEKPQVKSKKTK+T
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSE-DDDEITEKPQVKSKKTKVT

TYK29223.1 uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa]1.1e-3284.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

XP_008443784.1 PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]1.1e-3284.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

XP_011660264.1 uncharacterized protein LOC105436354 [Cucumis sativus]2.5e-3284.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK S  LGSETHLVNT NKGTLSEQL SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

TrEMBL top hitse value%identityAlignment
A0A0A0M0V3 Uncharacterized protein1.2e-3284.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK S  LGSETHLVNT NKGTLSEQL SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

A0A1S3B8U1 uncharacterized protein LOC1034872895.5e-3384.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

A0A5A7SX16 Uncharacterized protein5.5e-3384.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

A0A5D3DZN8 Uncharacterized protein5.5e-3384.95Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT
        MDA  +ED P RPRVK SF LGSE HLVNT NKGTLSEQL+SMKE+SMAILKEYIT HNVPNDVPDELVEE SEDDDEITEKPQVK+KKTKVT
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT

A0A6J1G9M3 uncharacterized protein LOC1114520651.5e-3082.98Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSE-DDDEITEKPQVKSKKTKVT
        MDA+ QE     PRVKASFRLGSE HLVNT NKGTLSEQL+SMKEESMAILKEYIT HNVPNDVPDEL+EE SE DDDE TEKPQVKSKKTK+T
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSE-DDDEITEKPQVKSKKTKVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47820.1 unknown protein3.7e-1342.71Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVP-NDVPDELVEEPSEDDDEITEK---PQVKSKKTKV
        M+ E     P +  VK  F+LG+E++ ++++   T+ +QLVSMKEESM ILK++IT HNVP +DVPD+++ +  E DD+       P    KKTK+
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVP-NDVPDELVEEPSEDDDEITEK---PQVKSKKTKV

AT1G47820.2 unknown protein3.7e-1342.71Show/hide
Query:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVP-NDVPDELVEEPSEDDDEITEK---PQVKSKKTKV
        M+ E     P +  VK  F+LG+E++ ++++   T+ +QLVSMKEESM ILK++IT HNVP +DVPD+++ +  E DD+       P    KKTK+
Subjt:  MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVP-NDVPDELVEEPSEDDDEITEK---PQVKSKKTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCGAAGGTCAAGAAGATACTCCTCCAAGGCCTCGGGTTAAGGCGTCATTTCGCTTAGGATCGGAGACACATTTGGTTAATACAGTTAATAAAGGCACTCTGTC
AGAGCAGTTGGTTTCTATGAAAGAGGAAAGCATGGCCATTTTGAAGGAGTACATAACGATACATAACGTTCCTAACGATGTACCGGACGAACTAGTTGAAGAACCTTCCG
AGGACGATGATGAAATTACTGAAAAGCCTCAAGTGAAGTCAAAGAAGACAAAAGTAACATAA
mRNA sequenceShow/hide mRNA sequence
GGGACAAAATCTCTGTATTCAAACCTATTTTATCTGCTATTCATCTTCGACGACTCTTAGATACTAACAAAGGTTCAATGGATGCCGAAGGTCAAGAAGATACTCCTCCA
AGGCCTCGGGTTAAGGCGTCATTTCGCTTAGGATCGGAGACACATTTGGTTAATACAGTTAATAAAGGCACTCTGTCAGAGCAGTTGGTTTCTATGAAAGAGGAAAGCAT
GGCCATTTTGAAGGAGTACATAACGATACATAACGTTCCTAACGATGTACCGGACGAACTAGTTGAAGAACCTTCCGAGGACGATGATGAAATTACTGAAAAGCCTCAAG
TGAAGTCAAAGAAGACAAAAGTAACATAATTTCTATGCTTATGGATATCACTAAACCCCCAAGATTCTAAACAGTGTCTTCTTAGTGAATATAGAACATAATTTGAAGTT
GTTTAGTACTCTAATTGATCGTGGTTTTTGTGGTATATGTTCTTTTTTCACTGAATTCTATTTTTTTTATTCGAATTAATTTCCTCTCCTACTTTAGCAATAATTCAGTT
CAAATTATTTATTAGAAAAATCTTTTGTTCCTA
Protein sequenceShow/hide protein sequence
MDAEGQEDTPPRPRVKASFRLGSETHLVNTVNKGTLSEQLVSMKEESMAILKEYITIHNVPNDVPDELVEEPSEDDDEITEKPQVKSKKTKVT