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Sed0009482 (gene) of Chayote v1 genome

Gene IDSed0009482
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein
Genome locationLG05:37318510..37318966
RNA-Seq ExpressionSed0009482
SyntenySed0009482
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR039616 - CLAVATA3/ESR (CLE)-related protein 1/3/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3442441.1 hypothetical protein FNV43_RR16357 [Rhamnella rubrinervis]3.2e-0443.84Show/hide
Query:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        K + CLVL++ + FS SE+R  SS     K + + M    +++L+ +I  K + G  FVSKR+SPGGPDP HH
Subjt:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]4.5e-1465.82Show/hide
Query:  LFLCLVLVLALCFSISESRLLSS-------SANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        LF  LVL+L LC SISESRLLSS       S++  K +  F++ N E++LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  LFLCLVLVLALCFSISESRLLSS-------SANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
PON45686.1 CLAVATA3/ESR (CLE)-related protein [Parasponia andersonii]1.9e-0449.32Show/hide
Query:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL+LCL+L+++  FS SE+R L +S   KK + + MR   +Q+L+  IE   + GR F SKR+SPGGPDP HH
Subjt:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
PON98404.1 CLAVATA3/ESR (CLE)-related protein [Trema orientale]8.5e-0550.68Show/hide
Query:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL+LCL+L+++  FS SESR L +S   KK + + MR   +Q+L+  IE   + GR F SKR+SPGGPDP HH
Subjt:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein2.2e-1465.82Show/hide
Query:  LFLCLVLVLALCFSISESRLLSS-------SANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        LF  LVL+L LC SISESRLLSS       S++  K +  F++ N E++LK IIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  LFLCLVLVLALCFSISESRLLSS-------SANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
A0A2P5BA90 CLAVATA3/ESR (CLE)-related protein9.2e-0549.32Show/hide
Query:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL+LCL+L+++  FS SE+R L +S   KK + + MR   +Q+L+  IE   + GR F SKR+SPGGPDP HH
Subjt:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
A0A2P5FKV9 CLAVATA3/ESR (CLE)-related protein4.1e-0550.68Show/hide
Query:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL+LCL+L+++  FS SESR L +S   KK + + MR   +Q+L+  IE   + GR F SKR+SPGGPDP HH
Subjt:  KLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
A0A072V9Z0 CLAVATA3/ESR (CLE)-related protein 332.0e-0437.14Show/hide
Query:  LCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        LC VL+        ++R L SS +      +F+  +V+Q++K I+  K+ LG  + + RLSP GPDP HH
Subjt:  LCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
Q8S8N0 CLAVATA3/ESR (CLE)-related protein 44.4e-0441.77Show/hide
Query:  KLFLCLVLVLALCFSISESRLL------SSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL++CL+L+L L FS+ + R L      S S N +K     ++ + E  LKV  ++ + +     SKRLSPGGPDPRHH
Subjt:  KLFLCLVLVLALCFSISESRLL------SSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 33.5e-0440.74Show/hide
Query:  KLFLCLVLVLAL-------CFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEK-LGRHFVSKRLSPGGPDPRHH
        KL++CLVL+L L       C  +      S S+  KK          E  +K   E +E  LG    SKRLSPGGPDPRHH
Subjt:  KLFLCLVLVLAL-------CFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEK-LGRHFVSKRLSPGGPDPRHH
AT2G31081.1 CLAVATA3/ESR-RELATED 43.1e-0541.77Show/hide
Query:  KLFLCLVLVLALCFSISESRLL------SSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH
        KL++CL+L+L L FS+ + R L      S S N +K     ++ + E  LKV  ++ + +     SKRLSPGGPDPRHH
Subjt:  KLFLCLVLVLALCFSISESRLL------SSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCAATTATTCAAAGCTCTTCCTTTGCCTTGTGCTGGTTTTGGCTCTGTGCTTCTCCATTTCTGAAAGCCGGTTGCTAAGTTCTTCTGCGAATTATAAGAAAAC
CCATAATTCATTTATGAGGAATAATGTTGAGCAAATCTTGAAGGTTATTATTGAAGAAAAAGAGAAGCTTGGAAGGCATTTTGTGTCCAAGAGGCTCAGCCCTGGAGGAC
CTGATCCACGCCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATTCTTTGATGGCTTGCAATTATTCAAAGCTCTTCCTTTGCCTTGTGCTGGTTTTGGCTCTGTGCTTCTCCATTTCTGAAAGCCGGTTGCTAAGTTCTTCTGCGAATTAT
AAGAAAACCCATAATTCATTTATGAGGAATAATGTTGAGCAAATCTTGAAGGTTATTATTGAAGAAAAAGAGAAGCTTGGAAGGCATTTTGTGTCCAAGAGGCTCAGCCC
TGGAGGACCTGATCCACGCCATCATTGACTTCTGCCCGATTTCTTTTCTCTTTTCTGTTTCATTTTTTCACTGCCCCTTTTGTTTTGTTTTTCACACAGTTTAGAGTGGA
TAATCTTTATGTGGGTTTTGTAAAATGAGTCACATTTTATATATTTTTCTATATACACACACCCCATTATTATTCCTCTCATAATTCCCTTCTCTTTTTTCTTCTCAAAT
TTCTAAGTGAATTTCCC
Protein sequenceShow/hide protein sequence
MACNYSKLFLCLVLVLALCFSISESRLLSSSANYKKTHNSFMRNNVEQILKVIIEEKEKLGRHFVSKRLSPGGPDPRHH