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Sed0009514 (gene) of Chayote v1 genome

Gene IDSed0009514
OrganismSechium edule (Chayote v1)
DescriptionGH16248
Genome locationLG08:36697845..36698570
RNA-Seq ExpressionSed0009514
SyntenySed0009514
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EDV96444.1 GH16248 [Drosophila grimshawi]8.3e-0444.09Show/hide
Query:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP
        P   GG +GP GPRGP GP G  GP GP     P G   P GP  +  P    PP P  HGGH  L P G  G     P PP P G  G   P
Subjt:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP

XP_028891790.1 uncharacterized protein CJI97_001146 [[Candida] auris]6.4e-0440.86Show/hide
Query:  PTAAGGARGPDGPRGPRGPGGAR---GPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPE-PAVHGGHVLEPAGHGGNVDQSPEPPQPAGHGGH
        P+   G  GP+GP+GP+GPGG     GP GP     P G + P GP+G + P+    P  P  +GG+V +P G+GG       P  P G GGH
Subjt:  PTAAGGARGPDGPRGPRGPGGAR---GPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPE-PAVHGGHVLEPAGHGGNVDQSPEPPQPAGHGGH

XP_032599065.1 collagen alpha-2(XI) chain [Drosophila grimshawi]8.3e-0444.09Show/hide
Query:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP
        P   GG +GP GPRGP GP G  GP GP     P G   P GP  +  P    PP P  HGGH  L P G  G     P PP P G  G   P
Subjt:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP

TrEMBL top hitse value%identityAlignment
B4IXS3 GH162484.0e-0444.09Show/hide
Query:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP
        P   GG +GP GPRGP GP G  GP GP     P G   P GP  +  P    PP P  HGGH  L P G  G     P PP P G  G   P
Subjt:  PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHV-LEPAGHGGNVDQSPEPPQPAGHGGHVLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATTTATGGTTTTTATATGGAAAGTGTTTAGTCCCTGGGCATTTCGGCCTTTATTAGGCTTAGTCATGTTGATCCAACTGTTTACCATTGCCTTTTACCTCAT
GGTAAACACATCCGTCTTCATCGTGCTTCTCGGACGCATCAAGGAATATATACATCCAATAATAGTCTGCCTTGGTTATCAGTACTTCATGGTCGCTGTTGCAGTCTTTT
TTGCTGTACACCTAGGATGTTACTGTTTCCACAACTGGAATACCCTATGGACCAAATTTAAAGAGTTTATGTCCAAGGTTTGGAATGAGATCGTGACTGACCAAGACATT
CCTACTGCAGCTGGTGGGGCTAGAGGACCTGATGGGCCTAGAGGTCCTAGAGGACCTGGTGGGGCTAGAGGTCCTAGAGGACCTGATTGCCTCCAAGATCCTAGAGGATC
TGCTGAGCCCCAAGGTCCTAGAGGACGTGCCGCGCCAACTCTTCATCAGCCTCCTGAGCCTGCTGTCCACGGTGGACATGTTCTTGAGCCTGCTGGCCATGGTGGAAATG
TTGACCAGTCTCCTGAGCCTCCTCAGCCTGCTGGCCACGGTGGACATGTTTTACCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGATTTATGGTTTTTATATGGAAAGTGTTTAGTCCCTGGGCATTTCGGCCTTTATTAGGCTTAGTCATGTTGATCCAACTGTTTACCATTGCCTTTTACCTCAT
GGTAAACACATCCGTCTTCATCGTGCTTCTCGGACGCATCAAGGAATATATACATCCAATAATAGTCTGCCTTGGTTATCAGTACTTCATGGTCGCTGTTGCAGTCTTTT
TTGCTGTACACCTAGGATGTTACTGTTTCCACAACTGGAATACCCTATGGACCAAATTTAAAGAGTTTATGTCCAAGGTTTGGAATGAGATCGTGACTGACCAAGACATT
CCTACTGCAGCTGGTGGGGCTAGAGGACCTGATGGGCCTAGAGGTCCTAGAGGACCTGGTGGGGCTAGAGGTCCTAGAGGACCTGATTGCCTCCAAGATCCTAGAGGATC
TGCTGAGCCCCAAGGTCCTAGAGGACGTGCCGCGCCAACTCTTCATCAGCCTCCTGAGCCTGCTGTCCACGGTGGACATGTTCTTGAGCCTGCTGGCCATGGTGGAAATG
TTGACCAGTCTCCTGAGCCTCCTCAGCCTGCTGGCCACGGTGGACATGTTTTACCTGCTTGA
Protein sequenceShow/hide protein sequence
MAGFMVFIWKVFSPWAFRPLLGLVMLIQLFTIAFYLMVNTSVFIVLLGRIKEYIHPIIVCLGYQYFMVAVAVFFAVHLGCYCFHNWNTLWTKFKEFMSKVWNEIVTDQDI
PTAAGGARGPDGPRGPRGPGGARGPRGPDCLQDPRGSAEPQGPRGRAAPTLHQPPEPAVHGGHVLEPAGHGGNVDQSPEPPQPAGHGGHVLPA