CuGenDBv2

Gene ID	Sed0009519
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S25
Genome location	LG07:37649698..37651837
RNA-Seq Expression	Sed0009519
Synteny	Sed0009519
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573888.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-44

93.46

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVS+H+SQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

XP_016900931.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]

1.2e-44

95.33

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAHASQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

XP_022150617.1 40S ribosomal protein S25-2-like [Momordica charantia]

2.7e-44

94.39

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPP+SKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAHASQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

XP_022945101.1 40S ribosomal protein S25-2-like [Cucurbita moschata]

6.0e-44

93.46

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVS+H+SQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

XP_022961406.1 40S ribosomal protein S25-2-like [Cucurbita moschata]

3.5e-44

94.39

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAH SQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DY71 40S ribosomal protein S25

5.9e-45

95.33

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAHASQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

A0A5D3CG38 40S ribosomal protein S25

5.9e-45

95.33

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAHASQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

A0A6J1DB76 40S ribosomal protein S25

1.3e-44

94.39

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPP+SKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAHASQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

A0A6J1HAA0 40S ribosomal protein S25

1.7e-44

94.39

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAH SQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

A0A6J1HUK6 40S ribosomal protein S25

1.7e-44

94.39

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDKAPPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLLVEVPK KLVTPSILSDRLRINGSLARRAIKDLMA+GLIRMVSAH SQEI
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

4.5e-42

84.11

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKK +APPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFD++TYDKLL E PK KL+TPS+LSDRLRI+GSLAR+AI+DLMA+G IRMVSAHASQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

Q8GYL5 40S ribosomal protein S25-3

2.4e-43

87.74

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQATYDKLL E PK KL+TPSILSDRLRINGSLARRAI++LMAKG IRMVSAH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATN
        YTRAT+
Subjt:  YTRATN

Q9SIK2 40S ribosomal protein S25-2

1.6e-44

87.85

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKGLIRMVSAH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

Q9SIW5 40S ribosomal protein S25-1

3.8e-41

84.76

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQATYDKL+ E PK KL+TPSILSDRLRINGSLAR+AI+DLM KG IRMVS H+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRAT
         TRAT
Subjt:  YTRAT

Q9T029 40S ribosomal protein S25-4

2.8e-44

86.92

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Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQATYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKG+IRMV+AH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

1.2e-45

87.85

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQ TYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKGLIRMVSAH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

AT2G21580.2 Ribosomal protein S25 family protein

2.9e-44

87.85

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK KWSKGKQKEKVNN VLFDQ TYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKGLIRMVSAH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

AT4G34555.1 Ribosomal protein S25 family protein

1.7e-44

87.74

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQATYDKLL E PK KL+TPSILSDRLRINGSLARRAI++LMAKG IRMVSAH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATN
        YTRAT+
Subjt:  YTRATN

AT4G39200.1 Ribosomal protein S25 family protein

2.0e-45

86.92

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK+KWSKGKQKEKVNN VLFDQATYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKG+IRMV+AH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

AT4G39200.2 Ribosomal protein S25 family protein

4.9e-44

86.92

Show/hide

Query:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI
        APKKDK PPPSSKPAKSGGGKQKK KWSKGKQKEKVNN VLFDQATYDKLL E PK KL+TPSILSDR+RINGSLARRAI++LMAKG+IRMV+AH+SQ+I
Subjt:  APKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEI

Query:  YTRATNT
        YTRATNT
Subjt:  YTRATNT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTATGATAAAAGGGGCGCCAAAGAAGGATAAAGCTCCTCCACCGTCGTCGAAGCCTGCTAAATCCGGCGGAGGGAAACAGAAGAAGGAGAAGTGGAGCAAGGGAAA
GCAAAAGGAGAAGGTCAACAACCAAGTTTTGTTTGATCAAGCAACTTATGACAAGCTTCTCGTTGAAGTTCCGAAGAACAAACTTGTCACTCCTTCAATCTTGTCTGATA
GGTTGAGGATCAATGGATCTCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAAAGGTCTCATTAGAATGGTCTCTGCACATGCCAGCCAGGAGATCTACACAAGGGCC
ACCAATACCTAA

mRNA sequence

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Protein sequence

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MVMIKGAPKKDKAPPPSSKPAKSGGGKQKKEKWSKGKQKEKVNNQVLFDQATYDKLLVEVPKNKLVTPSILSDRLRINGSLARRAIKDLMAKGLIRMVSAHASQEIYTRA
TNT

Sed0009519 (gene) of Chayote v1 genome