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Sed0009523 (gene) of Chayote v1 genome

Gene IDSed0009523
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein 1
Genome locationLG07:5903396..5904368
RNA-Seq ExpressionSed0009523
SyntenySed0009523
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058773.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]2.9e-2674.23Show/hide
Query:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT
        MAS Q N+SH+AGE VGQAQ+KKDEMM+Q + HDQSA+QTA++LKDQAA+F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N     +NP++NPTT
Subjt:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT

XP_004136082.1 late embryogenesis abundant protein 2 [Cucumis sativus]4.6e-2472.34Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHN
        MAS Q++SH+A E+VGQAQ+K+DEMM+Q +T DQ SA+QTAT+LKDQAA F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N   + HNP++N
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHN

XP_008461082.1 PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]2.9e-2674.23Show/hide
Query:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT
        MAS Q N+SH+AGE VGQAQ+KKDEMM+Q + HDQSA+QTA++LKDQAA+F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N     +NP++NPTT
Subjt:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT

XP_015868339.1 late embryogenesis abundant protein 2-like [Ziziphus jujuba]5.7e-2267.01Show/hide
Query:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGS--VHNPSH--NPTTR
        Q++++QAGE+ GQAQMKKDE M+Q+S   QS SQ A+++K+QA HF+QQTGEQ+KNMAQGAAEAVKNTLGMNADN P   GS   +NPSH  NP+TR
Subjt:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGS--VHNPSH--NPTTR

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]7.6e-2765.74Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMM-----------DQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHN
        MAS Q++SH+AGE+VGQAQ+KKDE++           D+ASTHDQS +QTA+ LKDQAA+F+QQTGEQVKNMAQGAA+AVKNTLGMN DNTPN     +N
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMM-----------DQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHN

Query:  PSHNPTTR
        P++NP+TR
Subjt:  PSHNPTTR

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein2.2e-2472.34Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHN
        MAS Q++SH+A E+VGQAQ+K+DEMM+Q +T DQ SA+QTAT+LKDQAA F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N   + HNP++N
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHN

A0A1S3CF46 late embryogenesis abundant protein 11.4e-2674.23Show/hide
Query:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT
        MAS Q N+SH+AGE VGQAQ+KKDEMM+Q + HDQSA+QTA++LKDQAA+F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N     +NP++NPTT
Subjt:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT

A0A5D3CF20 Late embryogenesis abundant protein 11.4e-2674.23Show/hide
Query:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT
        MAS Q N+SH+AGE VGQAQ+KKDEMM+Q + HDQSA+QTA++LKDQAA+F+QQTGEQVKNMAQGAAEAVKNTLGMN DNT N     +NP++NPTT
Subjt:  MAS-QQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTT

A0A6J1KJU5 late embryogenesis abundant protein 16.1e-2262.04Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMMDQA------------STHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSV
        MASQQ++SH  GEVVGQAQ+KKDE+M+QA            +T DQ SA+QTA++LKDQAA+F+QQTGEQVKNMAQGAAEAVKNTLGMN D++ N   + 
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMMDQA------------STHDQ-SASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSV

Query:  HNPSHNPT
        +NP++ P+
Subjt:  HNPSHNPT

A0A6P3Z5M0 late embryogenesis abundant protein 2-like2.7e-2267.01Show/hide
Query:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGS--VHNPSH--NPTTR
        Q++++QAGE+ GQAQMKKDE M+Q+S   QS SQ A+++K+QA HF+QQTGEQ+KNMAQGAAEAVKNTLGMNADN P   GS   +NPSH  NP+TR
Subjt:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGS--VHNPSH--NPTTR

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 11.3e-0542.05Show/hide
Query:  QAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTR
        +A +  G+A+ K  EM        QS  +TA   KD +A F+QQTGE+VK MAQGA +AVK T GM  D+   +        H PT R
Subjt:  QAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTR

O49817 Late embryogenesis abundant protein 22.9e-0539.78Show/hide
Query:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTR
        Q    +A +  G+A+ K  EM        QS  +TA   KD +A F+QQTGE+ K MAQGA +AVK T GM  D+         +  H PT R
Subjt:  QNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTR

Q94JF2 Late embryogenesis abundant protein 149.4e-0437.08Show/hide
Query:  QAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTRS
        Q G  +GQ     +    +A+   Q A +TA   KD+    +QQ GEQVK++A GA +AV  TLGM+ DN  N        ++ P T S
Subjt:  QAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTRS

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.1.8e-0536.36Show/hide
Query:  MASQQN--MSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADN-------------TPNEGG
        MAS Q+   S +AG++VGQA +K+++  + +                QA+ F+QQ GE+VK+MA  A+EAVKN LG+N DN              PN   
Subjt:  MASQQN--MSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADN-------------TPNEGG

Query:  SVHNPSHNPT
        S   P H P+
Subjt:  SVHNPSHNPT

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related3.9e-1351.02Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMMDQAS----------THDQSA-----SQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN-ADNTPN
        M+S Q +SH AGEV GQ Q+KK+E ++  S          TH QS       Q    L  QA+  IQQTG QVKNMAQGAA+AVKNTLGM+ A N+P+
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMMDQAS----------THDQSA-----SQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN-ADNTPN

AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein3.5e-0644.74Show/hide
Query:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN
        M ++QN S+QAG+  GQ + K   MMD+A   D +AS         A   +QQTG+Q+K  AQGAA+ VK+  GMN
Subjt:  MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein7.9e-0652Show/hide
Query:  DQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN
        D+ +    SA+++A   ++QAA    QTGE VKNMAQGA + VKN+LGMN
Subjt:  DQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein8.4e-0844Show/hide
Query:  ASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN
        ++ QN+S QAG+  GQ Q K   MMD+AS   QSA ++           +++TG+Q+K  AQGA E+VKN  GMN
Subjt:  ASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCCAACAAAATATGAGCCATCAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGATGATGGACCAAGCATCTACTCATGATCAATCAGCTTC
CCAAACTGCCACTGAGCTTAAGGACCAAGCTGCACATTTCATTCAACAGACCGGAGAACAAGTGAAGAACATGGCTCAAGGGGCAGCTGAAGCAGTGAAGAACACACTTG
GGATGAATGCTGATAACACCCCAAATGAAGGAGGCAGCGTCCACAACCCTTCCCACAATCCAACCACTAGATCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCCAACAAAATATGAGCCATCAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGATGATGGACCAAGCATCTACTCATGATCAATCAGCTTC
CCAAACTGCCACTGAGCTTAAGGACCAAGCTGCACATTTCATTCAACAGACCGGAGAACAAGTGAAGAACATGGCTCAAGGGGCAGCTGAAGCAGTGAAGAACACACTTG
GGATGAATGCTGATAACACCCCAAATGAAGGAGGCAGCGTCCACAACCCTTCCCACAATCCAACCACTAGATCAATTTAA
Protein sequenceShow/hide protein sequence
MASQQNMSHQAGEVVGQAQMKKDEMMDQASTHDQSASQTATELKDQAAHFIQQTGEQVKNMAQGAAEAVKNTLGMNADNTPNEGGSVHNPSHNPTTRSI