; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009540 (gene) of Chayote v1 genome

Gene IDSed0009540
OrganismSechium edule (Chayote v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationLG09:8423063..8425632
RNA-Seq ExpressionSed0009540
SyntenySed0009540
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP71160.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]9.6e-18945.54Show/hide
Query:  QVTGQILLQGTL-HNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNN
        QVT +ILLQG +  +GLY FS L+    ++   + + S+ SS     ++ +  +SH               WH RL HP  S V  ++  H        N
Subjt:  QVTGQILLQGTL-HNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNN

Query:  ESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGG
         S FC++C + K H LP   S ++Y+ PL L+ TDLWGP++  S +G+ YY+SF+DA++++TWIY L +KS+   VF  FK  VE  LNT I  +Q+D G
Subjt:  ESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGG

Query:  TEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCK
         EY     F  THGI HR+ CP+T  QNG+VERKH H+VD+G++LL HAS+PL+FWD AF+T+V+LINRL T  L+   P   LF Q PDY  LK FGC 
Subjt:  TEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCK

Query:  CFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQC
        CFP+LRPY  HKL+FRS+ C FLGYS+ HKGYKCLS  G++Y+S++V+F+E  FP+L+       P                VP P       P   P C
Subjt:  CFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQC

Query:  PVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKW
          T       +P   ++  + +  D   S++  V  Q  STPS     TP+ T +  +N H MQTR KSGI+KPK    +      EP +VK+AL    W
Subjt:  PVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKW

Query:  LQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNA
          AMK+E++AL +N TW LV  P N++ VG KW+F++K ++DGS+ ++K+RLVAKGFHQ    D+ ETFS V+KP+TIR+++T+AL  NW + Q+D+NNA
Subjt:  LQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNA

Query:  FLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIF
        FL+G+L ETVYM QPPG  + +D +LVC+L+KALYG+KQAPR WF+RL   L + GF  S+ D SL    H +   ++L+YVDDI+I G S   I ++  
Subjt:  FLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIF

Query:  SLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
         LN TFSLK LG L YFLGIE+ +     L ++Q+KYI+DLLH+T+M++AH I++PM SG   S  G + F D  +YRS+VGAL
Subjt:  SLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

PNX93770.1 histone deacetylase [Trifolium pratense]1.1e-18746.62Show/hide
Query:  QVTGQILLQGTL-HNGLYRFS---LLDTSLTTIQHPI-----STCSLNSSKHIPTASVSAN-NSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTH
        QV+ + LL+GT+  +GLY+F     ++ +  T   P+     ST S  +S H P  +   + N+ + +  + N       WH RLGH     V +VL+  
Subjt:  QVTGQILLQGTL-HNGLYRFS---LLDTSLTTIQHPI-----STCSLNSSKHIPTASVSAN-NSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTH

Query:  MPNVVYKN-NESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNT
           V Y N N   FC  C + K H L    S T+YTKP ++V  DLWGPA   S  G+ YY+SFVD Y +YTWIYFL  KS+A   F  F +Y++    T
Subjt:  MPNVVYKN-NESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNT

Query:  SIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHG-KSPLHQLFNQVP
        SI  +Q+D G E+ P      T GI+HR+TCP+TS QNG VERKH  +V++GL+LLS AS+PL +WD +F  +V+LIN+L T  L   KSP H LFN  P
Subjt:  SIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHG-KSPLHQLFNQVP

Query:  DYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG
        DYSQ+K+FGC CFP+LRPY  +KL FRS PC +LG S +HKG+KCL  +GR+YVS++V+F E  FP+L  L P      +     L  +  S  P P N 
Subjt:  DYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG

Query:  APPYPGCQPQ-CPVTLPRESELL--PHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEV
          P     PQ  P+T+ + + L+  P N++    Q H+     +   ++              PS TSN   N HPM TRGK+G  KPK +  +     +
Subjt:  APPYPGCQPQ-CPVTLPRESELL--PHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEV

Query:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL
        EP SVK AL   +WL+AM+ E+ AL  N TWSLVS PP++K +G KWIF++K + DG++ +YK+RLVAKGF QT   D+ ETFS V+KP TIRV+LT+A+
Subjt:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL

Query:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDIL
           W ++QID+NNAFL+G+L E VYM QPPG     D +LVC+LHK+LYGLKQAPRAW+ERLT  L ++GF+ S+ D SLL  H    C Y+LIYVDDIL
Subjt:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDIL

Query:  IMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
        I G +P  I  LI  LN  FSLK LG + YFLGIEV +  +GGL L+Q+KYI+DLL RT M +   I +PM S    S FG +   D  +YRS VGAL
Subjt:  IMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

RHN69202.1 putative RNA-directed DNA polymerase [Medicago truncatula]1.2e-18645.08Show/hide
Query:  QVTGQILLQGTL-HNGLYRFS-----------LLDTSLTTIQHPISTCSLNS-SKHI-PTASVSANN------SHVDLADITNR----PSLTDLWHQRLG
        Q + ++LL+G L H+GLY+F              ++S+ T+ + +   + NS S H+ P+   + NN       H+  +  ++     PS+  +WH RLG
Subjt:  QVTGQILLQGTL-HNGLYRFS-----------LLDTSLTTIQHPISTCSLNS-SKHI-PTASVSANN------SHVDLADITNR----PSLTDLWHQRLG

Query:  HPAISTVHSVLKTHMPNVVYKNNE-SHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIV
        HP    + S++K  + N+   N   S FC AC   K+H LP   S   YTKPL+L+  DLWGPA   S  G+ Y+++ VDAY+RYTWIY L  KS     
Subjt:  HPAISTVHSVLKTHMPNVVYKNNE-SHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIV

Query:  FLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLH
        F NFKT +E  LN  I  VQTDGG E+ P   +  + GI HR TCP+T  QNG VERKH H+V+ GL+LLSHA MPL FWD AF T+ +LINRL T VL 
Subjt:  FLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLH

Query:  GKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKV-------PRPN
         KSP   L  Q PDY  LK FGC CFP+LRPY  HK +F S+ C FLGYS+ HKGYKCL   GR+++S++V+F+E+ FP+L+    QKV       P  +
Subjt:  GKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKV-------PRPN

Query:  TRVTSLIP---SVPSHVPQ-------PRNGAPPYPGCQ-----PQCPVTLPRESELLPHNTADQEHQTHADIPP------SIAQEVEHQDRSTPSV----
        T + + +    +V SH PQ       P     P P        P  P++   ++  +  + ++  H+ +  + P      S +        S+ SV    
Subjt:  TRVTSLIP---SVPSHVPQ-------PRNGAPPYPGCQ-----PQCPVTLPRESELLPHNTADQEHQTHADIPP------SIAQEVEHQDRSTPSV----

Query:  ---SDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHS
           S+ P P      P N H M+TRGK GI +P+    T     VEP + K AL+  KW  AM+EE+ AL  NQTWSLVS P N+  +G KW+F++K + 
Subjt:  ---SDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHS

Query:  DGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAP
        DG+V +YK+RLVAKGFHQ    DY ETFS VVKP+T+R +LT+A+  NW ++Q+D+NNAFL+GVL+E VYM QPPG     D  LVC+LHKALYGLKQAP
Subjt:  DGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAP

Query:  RAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDL
        RAWFERL   L   GF  SR D SL   H    C +IL+YVDDI+I G+S   I  L+  LN  FSLKDLG L YFLGIEV +  +G L LSQ KYI+DL
Subjt:  RAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDL

Query:  LHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
        L + NM +A+ + +PM S +  S FG     D   +RSIVGAL
Subjt:  LHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

RVW44519.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.1e-19848.51Show/hide
Query:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH
        +LLQG LH GLY+F+L       +    S  SL++ K+  T   ++  +N + D  + TN    + DLWH+RLGHPA   V  VL  +      K+  S 
Subjt:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH

Query:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY
         C+AC + K H LPF  S T+YTKPLQLVV+DLWGPA   S  GF YY+SFVDAY+RYTW+YFL TKS+    FL FK   E      +   QTD G E+
Subjt:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY

Query:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP
          L  +F+ +GI HR++CP+TSKQNGI+ERKH H+V++GL+LL+ AS+PL +W DAF+T+VFLINRL T+VL  K P   LFN  P+YSQLKVFGC CFP
Subjt:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP

Query:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT
        +LRPY  HKL+FRS PCTFLGYSSKHKGYKCL+  GR+++SR+V+FDE  FPF ++L      +P   V+     +P  +P  +N  P         P +
Subjt:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT

Query:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK
          + S  L  N          D+     S    + ++  S PS                SD P  S+ +     P   H M TR K+GIFKPK Y  T  
Subjt:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK

Query:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL
         +  EP + +EA+   KW +AM EE  AL KN+TWSLVS P N+  VG +W+FK+KR+ DGSV+RYK+RLVAKG+ Q    D++ETFS VVKP TIRV+L
Subjt:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL

Query:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI
         +A++++W +RQ+D+NNAFL+G L E VYMDQPPG     +++  LVC+LHKALYGLKQAPRAWF++L + L++ GF  +++D SL  R    +  ++L+
Subjt:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI

Query:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI
        YVDDI++ G S  +I++LI  L   FSLKDLG LSYFLGIEV     GGL LSQ KYIQDLL +T M  A  + TPM SG   SA  G+   +V  YRS+
Subjt:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI

Query:  VGAL
        VGAL
Subjt:  VGAL

RVW60229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.6e-18947.14Show/hide
Query:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH
        +LLQG LH GLY+F+L       +    S  SL++ K+  T   ++  +N + D  + TN    + DLWH+RLGHPA   V  VL  +      K+  S 
Subjt:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH

Query:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY
         C+AC + K H LPF  S T+YTKPLQLVV+DLWGPA   S  GF YY+SFVDAY+RYTW+YFL TKS+    FL FK   E      +   QTD G E+
Subjt:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY

Query:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP
          L  +F+ +GI HR++CP+TSKQNGI+ERKH H+V++GL+LL+ AS+PL +W DAF+T+VFLINRL T+VL  K P   LFN  P+YSQLKVFGC CFP
Subjt:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP

Query:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT
        +LRPY  HKL+FRS PCTFLGYSSKHKGYKCL+  GR+++SR+V+FDE  FPF ++L      +P   V+     +P  +P  +N  P         P +
Subjt:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT

Query:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK
          + S  L  N          D+     S    + ++  S PS                SD P  S+ +     P   H M TR K+GIFKPK Y  T  
Subjt:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK

Query:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL
         +  EP + +EA+   KW +AM EE  AL KN+TWSLVS P N+  VG +W+FK+KR+ DGSV+RYK+RLVAKG+ Q    D++ETFS VVKP TIRV+L
Subjt:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL

Query:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI
         +A++++W +RQ+D+NNAFL+G L E VYMDQPPG     +++  LVC+LHKALYGLKQAPRAWF++L + L++ GF  +++D SL  R    +  ++L+
Subjt:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI

Query:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI
        YVDDI++ G S  +I++LI  L   FSLKDLG LSYFLGIE                  DLL +T M  A  + TPM SG   SA  G+   +V  YRS+
Subjt:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI

Query:  VGAL
        VGAL
Subjt:  VGAL

TrEMBL top hitse value%identityAlignment
A0A151TVT8 Retrovirus-related Pol polyprotein from transposon TNT 1-944.7e-18945.54Show/hide
Query:  QVTGQILLQGTL-HNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNN
        QVT +ILLQG +  +GLY FS L+    ++   + + S+ SS     ++ +  +SH               WH RL HP  S V  ++  H        N
Subjt:  QVTGQILLQGTL-HNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNN

Query:  ESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGG
         S FC++C + K H LP   S ++Y+ PL L+ TDLWGP++  S +G+ YY+SF+DA++++TWIY L +KS+   VF  FK  VE  LNT I  +Q+D G
Subjt:  ESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGG

Query:  TEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCK
         EY     F  THGI HR+ CP+T  QNG+VERKH H+VD+G++LL HAS+PL+FWD AF+T+V+LINRL T  L+   P   LF Q PDY  LK FGC 
Subjt:  TEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCK

Query:  CFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQC
        CFP+LRPY  HKL+FRS+ C FLGYS+ HKGYKCLS  G++Y+S++V+F+E  FP+L+       P                VP P       P   P C
Subjt:  CFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQC

Query:  PVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKW
          T       +P   ++  + +  D   S++  V  Q  STPS     TP+ T +  +N H MQTR KSGI+KPK    +      EP +VK+AL    W
Subjt:  PVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKW

Query:  LQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNA
          AMK+E++AL +N TW LV  P N++ VG KW+F++K ++DGS+ ++K+RLVAKGFHQ    D+ ETFS V+KP+TIR+++T+AL  NW + Q+D+NNA
Subjt:  LQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNA

Query:  FLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIF
        FL+G+L ETVYM QPPG  + +D +LVC+L+KALYG+KQAPR WF+RL   L + GF  S+ D SL    H +   ++L+YVDDI+I G S   I ++  
Subjt:  FLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIF

Query:  SLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
         LN TFSLK LG L YFLGIE+ +     L ++Q+KYI+DLLH+T+M++AH I++PM SG   S  G + F D  +YRS+VGAL
Subjt:  SLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

A0A2K3MSH2 Histone deacetylase5.2e-18846.62Show/hide
Query:  QVTGQILLQGTL-HNGLYRFS---LLDTSLTTIQHPI-----STCSLNSSKHIPTASVSAN-NSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTH
        QV+ + LL+GT+  +GLY+F     ++ +  T   P+     ST S  +S H P  +   + N+ + +  + N       WH RLGH     V +VL+  
Subjt:  QVTGQILLQGTL-HNGLYRFS---LLDTSLTTIQHPI-----STCSLNSSKHIPTASVSAN-NSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTH

Query:  MPNVVYKN-NESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNT
           V Y N N   FC  C + K H L    S T+YTKP ++V  DLWGPA   S  G+ YY+SFVD Y +YTWIYFL  KS+A   F  F +Y++    T
Subjt:  MPNVVYKN-NESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNT

Query:  SIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHG-KSPLHQLFNQVP
        SI  +Q+D G E+ P      T GI+HR+TCP+TS QNG VERKH  +V++GL+LLS AS+PL +WD +F  +V+LIN+L T  L   KSP H LFN  P
Subjt:  SIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHG-KSPLHQLFNQVP

Query:  DYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG
        DYSQ+K+FGC CFP+LRPY  +KL FRS PC +LG S +HKG+KCL  +GR+YVS++V+F E  FP+L  L P      +     L  +  S  P P N 
Subjt:  DYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG

Query:  APPYPGCQPQ-CPVTLPRESELL--PHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEV
          P     PQ  P+T+ + + L+  P N++    Q H+     +   ++              PS TSN   N HPM TRGK+G  KPK +  +     +
Subjt:  APPYPGCQPQ-CPVTLPRESELL--PHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEV

Query:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL
        EP SVK AL   +WL+AM+ E+ AL  N TWSLVS PP++K +G KWIF++K + DG++ +YK+RLVAKGF QT   D+ ETFS V+KP TIRV+LT+A+
Subjt:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL

Query:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDIL
           W ++QID+NNAFL+G+L E VYM QPPG     D +LVC+LHK+LYGLKQAPRAW+ERLT  L ++GF+ S+ D SLL  H    C Y+LIYVDDIL
Subjt:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDIL

Query:  IMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
        I G +P  I  LI  LN  FSLK LG + YFLGIEV +  +GGL L+Q+KYI+DLL RT M +   I +PM S    S FG +   D  +YRS VGAL
Subjt:  IMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

A0A396IUH5 Putative RNA-directed DNA polymerase5.7e-18745.08Show/hide
Query:  QVTGQILLQGTL-HNGLYRFS-----------LLDTSLTTIQHPISTCSLNS-SKHI-PTASVSANN------SHVDLADITNR----PSLTDLWHQRLG
        Q + ++LL+G L H+GLY+F              ++S+ T+ + +   + NS S H+ P+   + NN       H+  +  ++     PS+  +WH RLG
Subjt:  QVTGQILLQGTL-HNGLYRFS-----------LLDTSLTTIQHPISTCSLNS-SKHI-PTASVSANN------SHVDLADITNR----PSLTDLWHQRLG

Query:  HPAISTVHSVLKTHMPNVVYKNNE-SHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIV
        HP    + S++K  + N+   N   S FC AC   K+H LP   S   YTKPL+L+  DLWGPA   S  G+ Y+++ VDAY+RYTWIY L  KS     
Subjt:  HPAISTVHSVLKTHMPNVVYKNNE-SHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIV

Query:  FLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLH
        F NFKT +E  LN  I  VQTDGG E+ P   +  + GI HR TCP+T  QNG VERKH H+V+ GL+LLSHA MPL FWD AF T+ +LINRL T VL 
Subjt:  FLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLH

Query:  GKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKV-------PRPN
         KSP   L  Q PDY  LK FGC CFP+LRPY  HK +F S+ C FLGYS+ HKGYKCL   GR+++S++V+F+E+ FP+L+    QKV       P  +
Subjt:  GKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKV-------PRPN

Query:  TRVTSLIP---SVPSHVPQ-------PRNGAPPYPGCQ-----PQCPVTLPRESELLPHNTADQEHQTHADIPP------SIAQEVEHQDRSTPSV----
        T + + +    +V SH PQ       P     P P        P  P++   ++  +  + ++  H+ +  + P      S +        S+ SV    
Subjt:  TRVTSLIP---SVPSHVPQ-------PRNGAPPYPGCQ-----PQCPVTLPRESELLPHNTADQEHQTHADIPP------SIAQEVEHQDRSTPSV----

Query:  ---SDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHS
           S+ P P      P N H M+TRGK GI +P+    T     VEP + K AL+  KW  AM+EE+ AL  NQTWSLVS P N+  +G KW+F++K + 
Subjt:  ---SDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHS

Query:  DGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAP
        DG+V +YK+RLVAKGFHQ    DY ETFS VVKP+T+R +LT+A+  NW ++Q+D+NNAFL+GVL+E VYM QPPG     D  LVC+LHKALYGLKQAP
Subjt:  DGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAP

Query:  RAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDL
        RAWFERL   L   GF  SR D SL   H    C +IL+YVDDI+I G+S   I  L+  LN  FSLKDLG L YFLGIEV +  +G L LSQ KYI+DL
Subjt:  RAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDL

Query:  LHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
        L + NM +A+ + +PM S +  S FG     D   +RSIVGAL
Subjt:  LHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

A0A438EA49 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-19848.51Show/hide
Query:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH
        +LLQG LH GLY+F+L       +    S  SL++ K+  T   ++  +N + D  + TN    + DLWH+RLGHPA   V  VL  +      K+  S 
Subjt:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH

Query:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY
         C+AC + K H LPF  S T+YTKPLQLVV+DLWGPA   S  GF YY+SFVDAY+RYTW+YFL TKS+    FL FK   E      +   QTD G E+
Subjt:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY

Query:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP
          L  +F+ +GI HR++CP+TSKQNGI+ERKH H+V++GL+LL+ AS+PL +W DAF+T+VFLINRL T+VL  K P   LFN  P+YSQLKVFGC CFP
Subjt:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP

Query:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT
        +LRPY  HKL+FRS PCTFLGYSSKHKGYKCL+  GR+++SR+V+FDE  FPF ++L      +P   V+     +P  +P  +N  P         P +
Subjt:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT

Query:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK
          + S  L  N          D+     S    + ++  S PS                SD P  S+ +     P   H M TR K+GIFKPK Y  T  
Subjt:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK

Query:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL
         +  EP + +EA+   KW +AM EE  AL KN+TWSLVS P N+  VG +W+FK+KR+ DGSV+RYK+RLVAKG+ Q    D++ETFS VVKP TIRV+L
Subjt:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL

Query:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI
         +A++++W +RQ+D+NNAFL+G L E VYMDQPPG     +++  LVC+LHKALYGLKQAPRAWF++L + L++ GF  +++D SL  R    +  ++L+
Subjt:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI

Query:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI
        YVDDI++ G S  +I++LI  L   FSLKDLG LSYFLGIEV     GGL LSQ KYIQDLL +T M  A  + TPM SG   SA  G+   +V  YRS+
Subjt:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI

Query:  VGAL
        VGAL
Subjt:  VGAL

A0A438FJP6 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-18947.14Show/hide
Query:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH
        +LLQG LH GLY+F+L       +    S  SL++ K+  T   ++  +N + D  + TN    + DLWH+RLGHPA   V  VL  +      K+  S 
Subjt:  ILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSA--NNSHVDLADITNRP-SLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESH

Query:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY
         C+AC + K H LPF  S T+YTKPLQLVV+DLWGPA   S  GF YY+SFVDAY+RYTW+YFL TKS+    FL FK   E      +   QTD G E+
Subjt:  FCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY

Query:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP
          L  +F+ +GI HR++CP+TSKQNGI+ERKH H+V++GL+LL+ AS+PL +W DAF+T+VFLINRL T+VL  K P   LFN  P+YSQLKVFGC CFP
Subjt:  SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFP

Query:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT
        +LRPY  HKL+FRS PCTFLGYSSKHKGYKCL+  GR+++SR+V+FDE  FPF ++L      +P   V+     +P  +P  +N  P         P +
Subjt:  YLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVT

Query:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK
          + S  L  N          D+     S    + ++  S PS                SD P  S+ +     P   H M TR K+GIFKPK Y  T  
Subjt:  LPRESELLPHNTADQEHQTHADI---PPSIAQEVEHQDRSTPSV---------------SDFPTPSVTS---NIPMNTHPMQTRGKSGIFKPKAYVTTSK

Query:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL
         +  EP + +EA+   KW +AM EE  AL KN+TWSLVS P N+  VG +W+FK+KR+ DGSV+RYK+RLVAKG+ Q    D++ETFS VVKP TIRV+L
Subjt:  YDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLL

Query:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI
         +A++++W +RQ+D+NNAFL+G L E VYMDQPPG     +++  LVC+LHKALYGLKQAPRAWF++L + L++ GF  +++D SL  R    +  ++L+
Subjt:  TMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGL--SLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILI

Query:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI
        YVDDI++ G S  +I++LI  L   FSLKDLG LSYFLGIE                  DLL +T M  A  + TPM SG   SA  G+   +V  YRS+
Subjt:  YVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSI

Query:  VGAL
        VGAL
Subjt:  VGAL

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-6727.06Show/hide
Query:  LWHQRLGHPAISTVHSVLKTHM-PNVVYKNN---ESHFCNACAMSKIHALPFH--KSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWI
        LWH+R GH +   +  + + +M  +    NN       C  C   K   LPF   K  T   +PL +V +D+ GP    + +   Y++ FVD +  Y   
Subjt:  LWHQRLGHPAISTVHSVLKTHM-PNVVYKNN---ESHFCNACAMSKIHALPFH--KSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWI

Query:  YFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY--SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFAT
        Y +  KS+   +F +F    E   N  ++ +  D G EY  + +  F    GI + +T P+T + NG+ ER    + +   +++S A +  SFW +A  T
Subjt:  YFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEY--SPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFAT

Query:  SVFLINRLHTDVL--HGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCL-SDDGRLYVSRNVLFDEMSF-----
        + +LINR+ +  L    K+P     N+ P    L+VFG   + +++     K + +S    F+GY  +  G+K   + + +  V+R+V+ DE +      
Subjt:  SVFLINRLHTDVL--HGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCL-SDDGRLYVSRNVLFDEMSF-----

Query:  -----PFLE---------------KLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG--------APPYPGCQPQCP-VTLPRES---------ELLPHNTA
              FL+               K+   + P  +    ++     S   + +N            +P    +C  +   ++S         E       
Subjt:  -----PFLE---------------KLTPQKVPRPNTRVTSLIPSVPSHVPQPRNG--------APPYPGCQPQCP-VTLPRES---------ELLPHNTA

Query:  DQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNI------PMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEAL---KSSKWLQAMKEE
        D  +++     P+ ++E E  +       D PT +    I       + T P  +  +      K  +         P S  E       S W +A+  E
Subjt:  DQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNI------PMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEAL---KSSKWLQAMKEE

Query:  HAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLS
          A K N TW++  RP N+ +V S+W+F +K +  G+  RYK+RLVA+GF Q   +DY ETF+ V +  + R +L++ +  N  V Q+D+  AFL+G L 
Subjt:  HAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLS

Query:  ETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHG--NTCCYILIYVDDILIMGDSPADINKLIFSLNQT
        E +YM  P G+S + D   VC+L+KA+YGLKQA R WFE     LK   F+ S  D  +     G  N   Y+L+YVDD++I       +N     L + 
Subjt:  ETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHG--NTCCYILIYVDDILIMGDSPADINKLIFSLNQT

Query:  FSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMES
        F + DL  + +F+GI +   +   ++LSQ+ Y++ +L + NM + + ++TP+ S
Subjt:  FSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMES

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-9933.33Show/hide
Query:  DLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTT
        DLWH+R+GH +   +  + K  + +   K      C+ C   K H + F  S       L LV +D+ GP    S  G +Y+++F+D  +R  W+Y L T
Subjt:  DLWHQRLGHPAISTVHSVLKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTT

Query:  KSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEYS--PLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLI
        K +   VF  F   VE+     + R+++D G EY+      +  +HGI H  T P T + NG+ ER +  +V+   S+L  A +P SFW +A  T+ +LI
Subjt:  KSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEYS--PLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLI

Query:  NRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYV-SRNVLFDEMSFPFLEKLTPQKVP
        NR  +  L  + P     N+   YS LKVFGC+ F ++      KL+ +S PC F+GY  +  GY+      +  + SR+V+F E        ++ +KV 
Subjt:  NRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLSDDGRLYV-SRNVLFDEMSFPFLEKLTPQKVP

Query:  RPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTR
                +IP+  + +P   N                P  +E      ++Q  Q     P  + ++ E  D     V + PT     + P+     + R
Subjt:  RPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVTLPRESELLPHNTADQEHQTHADIPPSIAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTR

Query:  GKSGIFKPKAYVTTSKYDEVEPPSVKEAL---KSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVV
         +S  +    YV  S  D+ EP S+KE L   + ++ ++AM+EE  +L+KN T+ LV  P  ++ +  KW+FK+K+  D  + RYK+RLV KGF Q + +
Subjt:  GKSGIFKPKAYVTTSKYDEVEPPSVKEAL---KSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVV

Query:  DYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRAD
        D+ E FS VVK  +IR +L++A + + +V Q+D+  AFLHG L E +YM+QP G  +     +VC+L+K+LYGLKQAPR W+ +   F+K   ++++ +D
Subjt:  DYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRAD

Query:  TSLLF-RHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTG-GLFLSQAKYIQDLLHRTNMSDAHLINTPM
          + F R   N    +L+YVDD+LI+G     I KL   L+++F +KDLGP    LG+++   RT   L+LSQ KYI+ +L R NM +A  ++TP+
Subjt:  TSLLF-RHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTG-GLFLSQAKYIQDLLHRTNMSDAHLINTPM

P25600 Putative transposon Ty5-1 protein YCL074W1.7e-2633.16Show/hide
Query:  IDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPAD
        +D++ AFL+  + E +Y+ QPPG    ++   V +L+  +YGLKQAP  W E +   LK+IGF +   +  L FR   +   YI +YVDD+L+   SP  
Subjt:  IDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPAD

Query:  INKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
         +++   L + +S+KDLG +  FLG+ +     G + LS   YI      + ++   L  TP+ +            KD+  Y+SIVG L
Subjt:  INKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.7e-15138.76Show/hide
Query:  VQIRFTLATGQV----TGQILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSV
        V + F  A+ QV    TG  LLQG   + LY + +  +       P+S  +  SSK        A +S                WH RLGHPA S ++SV
Subjt:  VQIRFTLATGQV----TGQILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSV

Query:  LKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKL
        +  +  +V+  +++   C+ C ++K + +PF +S    T+PL+ + +D+W      S + +RYY+ FVD + RYTW+Y L  KS+    F+ FK  +E  
Subjt:  LKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKL

Query:  LNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQ
          T I    +D G E+  L  +F  HGI H  + P+T + NG+ ERKH H+V+ GL+LLSHAS+P ++W  AFA +V+LINRL T +L  +SP  +LF  
Subjt:  LNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQ

Query:  VPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLS-DDGRLYVSRNVLFDEMSFPF---LEKLTP-QKVPRPNTRVTSLIPSVPSH
         P+Y +L+VFGC C+P+LRPY  HKL+ +SR C FLGYS     Y CL     RLY+SR+V FDE  FPF   L  L+P Q+  R ++ V S   ++P+ 
Subjt:  VPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLS-DDGRLYVSRNVLFDEMSFPF---LEKLTP-QKVPRPNTRVTSLIPSVPSH

Query:  ---VPQPRNGAPPYPGCQPQCPVTLPRESEL---------------LPHNTADQEHQTHADIPPSIAQEVEH-------------------QDRSTPSVS
           +P P    P +    P  P    R S++                P  TA +++       P+  Q   H                   Q  STP+ S
Subjt:  ---VPQPRNGAPPYPGCQPQCPVTLPRESEL---------------LPHNTADQEHQTHADIPPSIAQEVEH-------------------QDRSTPSVS

Query:  DFPTPSVTSN------------------------------IPMNTHPMQTRGKSGIFK--PKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKK
           +PS T++                               P+NTH M TR K+GI K  PK  +  S   E EP +  +ALK  +W  AM  E  A   
Subjt:  DFPTPSVTSN------------------------------IPMNTHPMQTRGKSGIFK--PKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKK

Query:  NQTWSLVSRPPNQ-KMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYM
        N TW LV  PP+   +VG +WIF  K +SDGS+ RYK+RLVAKG++Q   +DY ETFS V+K  +IR++L +A+ ++W +RQ+D+NNAFL G L++ VYM
Subjt:  NQTWSLVSRPPNQ-KMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYM

Query:  DQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLG
         QPPG         VC+L KALYGLKQAPRAW+  L  +L  IGF+ S +DTSL     G +  Y+L+YVDDILI G+ P  ++  + +L+Q FS+KD  
Subjt:  DQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLG

Query:  PLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
         L YFLGIE     T GL LSQ +YI DLL RTNM  A  + TPM      S + G K  D   YR IVG+L
Subjt:  PLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.0e-14539.42Show/hide
Query:  WHQRLGHPAISTVHSVLKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKS
        WH RLGHP+++ ++SV+  H   V+  +++   C+ C ++K H +PF  S    +KPL+ + +D+W      S + +RYY+ FVD + RYTW+Y L  KS
Subjt:  WHQRLGHPAISTVHSVLKTHMPNVVYKNNESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKS

Query:  EASIVFLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLH
        +    F+ FK+ VE    T I  + +D G E+  L  +   HGI H  + P+T + NG+ ERKH H+V++GL+LLSHAS+P ++W  AF+ +V+LINRL 
Subjt:  EASIVFLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHFFKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLH

Query:  TDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLS-DDGRLYVSRNVLFDEMSFPF-------LEKLTPQ
        T +L  +SP  +LF Q P+Y +LKVFGC C+P+LRPY  HKL  +S+ C F+GYS     Y CL    GRLY SR+V FDE  FPF             +
Subjt:  TDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRPCTFLGYSSKHKGYKCLS-DDGRLYVSRNVLFDEMSFPF-------LEKLTPQ

Query:  KVPRPNTRVTSLIPSVPSHVP-----------QPRNGAPPYPGCQ--------PQCPVTLPRESELL------PHNTADQEHQTH---------------
            PN    + +P+ P  +P            PR  + P P C         P   ++ P  SE        P  TA Q HQT                
Subjt:  KVPRPNTRVTSLIPSVPSHVP-----------QPRNGAPPYPGCQ--------PQCPVTLPRESELL------PHNTADQEHQTH---------------

Query:  --------------------ADIPPSIAQEVEHQDRSTPSVSDFPTP---------SVTSNIPMNTHPMQTRGKSGIFKP--KAYVTTSKYDEVEPPSVK
                              IP       E    S+ S S  P P          V +  P+NTH M TR K GI KP  K    TS     EP +  
Subjt:  --------------------ADIPPSIAQEVEHQDRSTPSVSDFPTP---------SVTSNIPMNTHPMQTRGKSGIFKP--KAYVTTSKYDEVEPPSVK

Query:  EALKSSKWLQAMKEEHAALKKNQTWSLV-SRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWD
        +A+K  +W QAM  E  A   N TW LV   PP+  +VG +WIF  K +SDGS+ RYK+RLVAKG++Q   +DY ETFS V+K  +IR++L +A+ ++W 
Subjt:  EALKSSKWLQAMKEEHAALKKNQTWSLV-SRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWD

Query:  VRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDS
        +RQ+D+NNAFL G L++ VYM QPPG         VC+L KA+YGLKQAPRAW+  L  +L  +GF+ S +DTSL     G +  Y+L+YVDDILI G+ 
Subjt:  VRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDS

Query:  PADINKLIFSLNQTFSLKDLGPLSYFLGIEVS-YPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL
           +   + +L+Q FS+K+   L YFLGIE    P+  GL LSQ +Y  DLL RTNM  A  + TPM +    +   G K  D   YR IVG+L
Subjt:  PADINKLIFSLNQTFSLKDLGPLSYFLGIEVS-YPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVGAL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.2e-6139.4Show/hide
Query:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL
        EP +  EA +   W  AM +E  A++   TW + + PPN+K +G KW++KIK +SDG++ RYK+RLVAKG+ Q + +D+ ETFS V K  +++++L ++ 
Subjt:  EPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMAL

Query:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTL----VCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYV
          N+ + Q+DI+NAFL+G L E +YM  PPG +  +  +L    VC L K++YGLKQA R WF + ++ L   GF+QS +D +   +        +L+YV
Subjt:  AKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTL----VCQLHKALYGLKQAPRAWFERLTLFLKRIGFIQSRADTSLLFRHHGNTCCYILIYV

Query:  DDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVG
        DDI+I  ++ A +++L   L   F L+DLGPL YFLG+E++     G+ + Q KY  DLL  T +      + PM+     SA  G  F D   YR ++G
Subjt:  DDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHIYRSIVG

Query:  AL
         L
Subjt:  AL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-2048.15Show/hide
Query:  YILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHI
        Y+L+YVDDIL+ G S   +N LIF L+ TFS+KDLGP+ YFLGI++      GLFLSQ KY + +L+   M D   ++TP+    L S+    K+ D   
Subjt:  YILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMESGSLPSAFGGEKFKDVHI

Query:  YRSIVGAL
        +RSIVGAL
Subjt:  YRSIVGAL

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)4.2e-2551.2Show/hide
Query:  MQTRGKSGIFK--PKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQT
        M TR K+GI K  PK  +T +   + EP SV  ALK   W QAM+EE  AL +N+TW LV  P NQ ++G KW+FK K HSDG++ R K+RLVAKGFHQ 
Subjt:  MQTRGKSGIFK--PKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKRHSDGSVARYKSRLVAKGFHQT

Query:  QVVDYFETFSLVVKPMTIRVLLTMA
        + + + ET+S VV+  TIR +L +A
Subjt:  QVVDYFETFSLVVKPMTIRVLLTMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTCAAATCAGGTTCACGTTGGCAACGGGGCAGGTAACTGGACAAATACTGCTTCAAGGGACTCTCCATAATGGACTCTACCGGTTCTCTTTACTTGATACATC
TCTTACTACAATACAACACCCTATCTCTACGTGTTCTTTGAATTCTTCAAAGCATATACCTACTGCCTCTGTTTCTGCAAATAATTCCCATGTTGATTTAGCTGATATTA
CGAATAGGCCTAGTCTCACTGACTTATGGCATCAAAGGCTTGGACATCCGGCCATTTCTACTGTTCATTCTGTTTTAAAAACTCATATGCCTAATGTGGTGTACAAAAAT
AATGAATCCCATTTTTGCAATGCTTGTGCTATGAGTAAGATCCATGCTCTTCCTTTTCATAAATCTTTAACTCTCTATACCAAACCACTACAATTAGTGGTTACTGATCT
ATGGGGCCCTGCATATACTCCCTCTAGAAATGGTTTTCGATATTATATGAGTTTTGTTGATGCATACGCTCGATATACATGGATCTATTTTCTTACAACTAAGTCCGAGG
CTTCAATAGTGTTTCTTAATTTCAAAACGTATGTGGAAAAATTATTAAACACTTCGATAATTAGAGTCCAAACCGACGGGGGAACTGAATATTCACCACTCGTTCATTTT
TTTAAAACTCATGGCATAGAACATAGAATTACTTGTCCCTACACATCGAAACAAAATGGCATTGTAGAACGTAAGCATAGCCATGTTGTTGATGTTGGTTTATCCCTATT
ATCTCATGCTTCTATGCCCCTCTCATTTTGGGATGATGCCTTTGCTACCTCTGTTTTTCTTATTAACAGGCTACATACCGATGTCCTACATGGAAAGAGTCCCTTGCACC
AGCTATTCAATCAAGTTCCTGATTATTCTCAACTCAAGGTATTTGGTTGTAAATGCTTTCCATATCTCCGTCCATATTTACCCCATAAACTGAATTTCAGGTCTCGTCCG
TGTACATTTTTGGGATACAGTTCCAAACACAAAGGTTATAAATGCTTATCTGATGATGGGAGATTATATGTCTCACGTAATGTACTATTTGACGAAATGTCCTTTCCATT
TCTAGAGAAATTGACTCCTCAAAAAGTACCCAGACCTAATACTCGAGTCACAAGTCTTATACCTTCTGTTCCTTCTCATGTTCCCCAACCCAGGAATGGTGCTCCTCCCT
ACCCTGGTTGCCAACCACAATGCCCTGTTACTTTACCACGTGAATCTGAGCTGCTACCTCATAATACTGCTGATCAGGAACATCAAACTCATGCAGATATACCTCCTTCG
ATTGCTCAAGAAGTTGAGCATCAAGATAGATCAACTCCAAGTGTGAGTGATTTTCCTACTCCGTCTGTTACATCCAACATCCCGATGAATACTCATCCAATGCAGACTCG
TGGGAAAAGTGGAATCTTTAAACCAAAGGCATATGTTACTACATCTAAATATGATGAGGTTGAACCTCCGAGTGTTAAAGAGGCATTAAAGAGCTCTAAATGGCTTCAAG
CTATGAAGGAAGAACATGCTGCTCTGAAGAAAAACCAGACTTGGTCTTTAGTTTCTCGACCTCCAAATCAGAAGATGGTAGGCTCCAAATGGATTTTTAAGATAAAAAGA
CACTCGGATGGATCAGTAGCTAGATACAAGTCACGACTTGTTGCGAAGGGATTTCACCAAACACAAGTTGTTGACTACTTTGAAACATTTAGTCTTGTTGTTAAACCGAT
GACGATTAGGGTTCTTCTCACCATGGCTCTTGCAAAGAACTGGGATGTTCGACAAATAGACATCAATAATGCATTCTTACATGGTGTCCTATCTGAAACTGTTTATATGG
ATCAACCCCCAGGTCTCTCTTTACACAAGGACCTTACTCTAGTTTGTCAACTGCACAAAGCTCTGTATGGTCTTAAACAGGCACCACGGGCCTGGTTTGAGAGGCTGACA
TTGTTTCTCAAAAGGATCGGATTTATCCAATCAAGAGCTGATACTTCTTTGCTATTCCGACATCATGGGAATACATGTTGCTATATATTGATATATGTGGATGATATCTT
AATCATGGGTGACTCTCCTGCTGACATAAACAAGTTAATTTTCTCTTTAAATCAAACTTTTTCTCTTAAAGATCTTGGACCCCTGAGCTACTTTCTTGGAATTGAAGTCT
CTTATCCTCGTACTGGTGGTCTATTTCTGTCACAAGCCAAATATATTCAGGATTTACTTCATCGGACAAACATGAGTGACGCTCATCTGATTAACACTCCTATGGAGAGT
GGTAGTTTGCCTTCAGCTTTTGGTGGGGAGAAATTCAAGGATGTTCATATTTATCGCAGTATTGTAGGTGCATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTCAAATCAGGTTCACGTTGGCAACGGGGCAGGTAACTGGACAAATACTGCTTCAAGGGACTCTCCATAATGGACTCTACCGGTTCTCTTTACTTGATACATC
TCTTACTACAATACAACACCCTATCTCTACGTGTTCTTTGAATTCTTCAAAGCATATACCTACTGCCTCTGTTTCTGCAAATAATTCCCATGTTGATTTAGCTGATATTA
CGAATAGGCCTAGTCTCACTGACTTATGGCATCAAAGGCTTGGACATCCGGCCATTTCTACTGTTCATTCTGTTTTAAAAACTCATATGCCTAATGTGGTGTACAAAAAT
AATGAATCCCATTTTTGCAATGCTTGTGCTATGAGTAAGATCCATGCTCTTCCTTTTCATAAATCTTTAACTCTCTATACCAAACCACTACAATTAGTGGTTACTGATCT
ATGGGGCCCTGCATATACTCCCTCTAGAAATGGTTTTCGATATTATATGAGTTTTGTTGATGCATACGCTCGATATACATGGATCTATTTTCTTACAACTAAGTCCGAGG
CTTCAATAGTGTTTCTTAATTTCAAAACGTATGTGGAAAAATTATTAAACACTTCGATAATTAGAGTCCAAACCGACGGGGGAACTGAATATTCACCACTCGTTCATTTT
TTTAAAACTCATGGCATAGAACATAGAATTACTTGTCCCTACACATCGAAACAAAATGGCATTGTAGAACGTAAGCATAGCCATGTTGTTGATGTTGGTTTATCCCTATT
ATCTCATGCTTCTATGCCCCTCTCATTTTGGGATGATGCCTTTGCTACCTCTGTTTTTCTTATTAACAGGCTACATACCGATGTCCTACATGGAAAGAGTCCCTTGCACC
AGCTATTCAATCAAGTTCCTGATTATTCTCAACTCAAGGTATTTGGTTGTAAATGCTTTCCATATCTCCGTCCATATTTACCCCATAAACTGAATTTCAGGTCTCGTCCG
TGTACATTTTTGGGATACAGTTCCAAACACAAAGGTTATAAATGCTTATCTGATGATGGGAGATTATATGTCTCACGTAATGTACTATTTGACGAAATGTCCTTTCCATT
TCTAGAGAAATTGACTCCTCAAAAAGTACCCAGACCTAATACTCGAGTCACAAGTCTTATACCTTCTGTTCCTTCTCATGTTCCCCAACCCAGGAATGGTGCTCCTCCCT
ACCCTGGTTGCCAACCACAATGCCCTGTTACTTTACCACGTGAATCTGAGCTGCTACCTCATAATACTGCTGATCAGGAACATCAAACTCATGCAGATATACCTCCTTCG
ATTGCTCAAGAAGTTGAGCATCAAGATAGATCAACTCCAAGTGTGAGTGATTTTCCTACTCCGTCTGTTACATCCAACATCCCGATGAATACTCATCCAATGCAGACTCG
TGGGAAAAGTGGAATCTTTAAACCAAAGGCATATGTTACTACATCTAAATATGATGAGGTTGAACCTCCGAGTGTTAAAGAGGCATTAAAGAGCTCTAAATGGCTTCAAG
CTATGAAGGAAGAACATGCTGCTCTGAAGAAAAACCAGACTTGGTCTTTAGTTTCTCGACCTCCAAATCAGAAGATGGTAGGCTCCAAATGGATTTTTAAGATAAAAAGA
CACTCGGATGGATCAGTAGCTAGATACAAGTCACGACTTGTTGCGAAGGGATTTCACCAAACACAAGTTGTTGACTACTTTGAAACATTTAGTCTTGTTGTTAAACCGAT
GACGATTAGGGTTCTTCTCACCATGGCTCTTGCAAAGAACTGGGATGTTCGACAAATAGACATCAATAATGCATTCTTACATGGTGTCCTATCTGAAACTGTTTATATGG
ATCAACCCCCAGGTCTCTCTTTACACAAGGACCTTACTCTAGTTTGTCAACTGCACAAAGCTCTGTATGGTCTTAAACAGGCACCACGGGCCTGGTTTGAGAGGCTGACA
TTGTTTCTCAAAAGGATCGGATTTATCCAATCAAGAGCTGATACTTCTTTGCTATTCCGACATCATGGGAATACATGTTGCTATATATTGATATATGTGGATGATATCTT
AATCATGGGTGACTCTCCTGCTGACATAAACAAGTTAATTTTCTCTTTAAATCAAACTTTTTCTCTTAAAGATCTTGGACCCCTGAGCTACTTTCTTGGAATTGAAGTCT
CTTATCCTCGTACTGGTGGTCTATTTCTGTCACAAGCCAAATATATTCAGGATTTACTTCATCGGACAAACATGAGTGACGCTCATCTGATTAACACTCCTATGGAGAGT
GGTAGTTTGCCTTCAGCTTTTGGTGGGGAGAAATTCAAGGATGTTCATATTTATCGCAGTATTGTAGGTGCATTATAG
Protein sequenceShow/hide protein sequence
MVVQIRFTLATGQVTGQILLQGTLHNGLYRFSLLDTSLTTIQHPISTCSLNSSKHIPTASVSANNSHVDLADITNRPSLTDLWHQRLGHPAISTVHSVLKTHMPNVVYKN
NESHFCNACAMSKIHALPFHKSLTLYTKPLQLVVTDLWGPAYTPSRNGFRYYMSFVDAYARYTWIYFLTTKSEASIVFLNFKTYVEKLLNTSIIRVQTDGGTEYSPLVHF
FKTHGIEHRITCPYTSKQNGIVERKHSHVVDVGLSLLSHASMPLSFWDDAFATSVFLINRLHTDVLHGKSPLHQLFNQVPDYSQLKVFGCKCFPYLRPYLPHKLNFRSRP
CTFLGYSSKHKGYKCLSDDGRLYVSRNVLFDEMSFPFLEKLTPQKVPRPNTRVTSLIPSVPSHVPQPRNGAPPYPGCQPQCPVTLPRESELLPHNTADQEHQTHADIPPS
IAQEVEHQDRSTPSVSDFPTPSVTSNIPMNTHPMQTRGKSGIFKPKAYVTTSKYDEVEPPSVKEALKSSKWLQAMKEEHAALKKNQTWSLVSRPPNQKMVGSKWIFKIKR
HSDGSVARYKSRLVAKGFHQTQVVDYFETFSLVVKPMTIRVLLTMALAKNWDVRQIDINNAFLHGVLSETVYMDQPPGLSLHKDLTLVCQLHKALYGLKQAPRAWFERLT
LFLKRIGFIQSRADTSLLFRHHGNTCCYILIYVDDILIMGDSPADINKLIFSLNQTFSLKDLGPLSYFLGIEVSYPRTGGLFLSQAKYIQDLLHRTNMSDAHLINTPMES
GSLPSAFGGEKFKDVHIYRSIVGAL