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Sed0009595 (gene) of Chayote v1 genome

Gene IDSed0009595
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG06:33868564..33870584
RNA-Seq ExpressionSed0009595
SyntenySed0009595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK66393.1 uncharacterized protein A4U43_C06F7380 [Asparagus officinalis]4.1e-0840Show/hide
Query:  NDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLAN-------FLCSGPSSSNGELTERWWNSLWRCNLPSKVPCF
        ++A  I  +P P+ GG D L+WHY KNG + VKS Y +A+          SG S  N  L+ + W  LW  NLP+K+  F
Subjt:  NDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLAN-------FLCSGPSSSNGELTERWWNSLWRCNLPSKVPCF

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]4.3e-1040Show/hide
Query:  NLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG
        N    +DA  I  LPR      D L WH++K GF+ V+S Y++A  L  G  SS+ +L+  WW  LW+CN+P+K   FF    +G
Subjt:  NLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG

TXG57245.1 hypothetical protein EZV62_018558 [Acer yangbiense]3.7e-0936.78Show/hide
Query:  VINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG
        V N    +DA  I  LPR      D L WH+++ GF+ V+S Y++A  L     S++ +L+  WW  LW+CN+P+K   FF     G
Subjt:  VINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG

TXG66198.1 hypothetical protein EZV62_007473 [Acer yangbiense]4.3e-1037.25Show/hide
Query:  ELGFHHVEVESDALRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTV
        +L   + E  SD   V N  R +DA  I  LPR      D L WH++K GF+ V+S Y++A  L      S+ +L+  WW+ LW CN+P+K   FF    
Subjt:  ELGFHHVEVESDALRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTV

Query:  DG
         G
Subjt:  DG

XP_030486845.1 uncharacterized protein LOC115703751 [Cannabis sativa]6.9e-0835.96Show/hide
Query:  INLLRE----NDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVD
        +NLL      +D  +I  +P      SD L+WH+E NG + VKS Y +A  L     S +G  +++WW   WR +LPSKV  F    ++
Subjt:  INLLRE----NDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVD

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein2.1e-1040Show/hide
Query:  NLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG
        N    +DA  I  LPR      D L WH++K GF+ V+S Y++A  L  G  SS+ +L+  WW  LW+CN+P+K   FF    +G
Subjt:  NLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG

A0A5C7HKG9 Uncharacterized protein1.8e-0936.78Show/hide
Query:  VINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG
        V N    +DA  I  LPR      D L WH+++ GF+ V+S Y++A  L     S++ +L+  WW  LW+CN+P+K   FF     G
Subjt:  VINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG

A0A5C7IAM9 Uncharacterized protein2.1e-1037.25Show/hide
Query:  ELGFHHVEVESDALRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTV
        +L   + E  SD   V N  R +DA  I  LPR      D L WH++K GF+ V+S Y++A  L      S+ +L+  WW+ LW CN+P+K   FF    
Subjt:  ELGFHHVEVESDALRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTV

Query:  DG
         G
Subjt:  DG

A0A803PQQ6 Uncharacterized protein8.8e-0941.89Show/hide
Query:  ENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCF
        E D   I  LP    G  D ++WHY KNG + V+S YRLA+ +      SN +  E+WW SLW+  +P KV  F
Subjt:  ENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCF

A0A803QHJ7 Uncharacterized protein5.2e-0935.96Show/hide
Query:  LRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG
        L+   +  ++DA  I  LP       D +LWHY KNG + VKS YR+A  L +    S+  L  +WW  LWR  +P K+  F      G
Subjt:  LRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGAACTTGGTTTTCACCATGTTGAGGTGGAGTCTGATGCTTTGCGTGTGATTAATCTATTACGAGAAAATGATGCGATTAAAATCAAACAACTGCCACGACC
GAAACAAGGTGGGAGTGATGTGCTACTTTGGCATTATGAGAAGAATGGGTTTTTCAAAGTTAAATCAGCGTATAGGCTTGCAAATTTTCTCTGCAGTGGCCCTTCAAGCT
CTAATGGTGAATTGACTGAACGGTGGTGGAATTCATTGTGGCGTTGTAATTTACCGAGTAAGGTACCTTGCTTCTTCCAGTCGACCGTTGATGGGAGAAATGGTTTTGGC
TGGTGCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTGAACTTGGTTTTCACCATGTTGAGGTGGAGTCTGATGCTTTGCGTGTGATTAATCTATTACGAGAAAATGATGCGATTAAAATCAAACAACTGCCACGACC
GAAACAAGGTGGGAGTGATGTGCTACTTTGGCATTATGAGAAGAATGGGTTTTTCAAAGTTAAATCAGCGTATAGGCTTGCAAATTTTCTCTGCAGTGGCCCTTCAAGCT
CTAATGGTGAATTGACTGAACGGTGGTGGAATTCATTGTGGCGTTGTAATTTACCGAGTAAGGTACCTTGCTTCTTCCAGTCGACCGTTGATGGGAGAAATGGTTTTGGC
TGGTGCGATTAA
Protein sequenceShow/hide protein sequence
MAFELGFHHVEVESDALRVINLLRENDAIKIKQLPRPKQGGSDVLLWHYEKNGFFKVKSAYRLANFLCSGPSSSNGELTERWWNSLWRCNLPSKVPCFFQSTVDGRNGFG
WCD