| GenBank top hits | e value | %identity | Alignment |
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| KAG6591223.1 Small nuclear ribonucleoprotein SmD3b, partial [Cucurbita argyrosperma subsp. sororia] | 1.0e-63 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| XP_022937091.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita moschata] | 1.0e-63 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| XP_022940723.1 small nuclear ribonucleoprotein SmD3b-like isoform X1 [Cucurbita moschata] | 2.3e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| XP_023522400.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita pepo subsp. pepo] | 3.0e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRG VPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| XP_038896140.1 small nuclear ribonucleoprotein SmD3a-like [Benincasa hispida] | 5.2e-63 | 96.97 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRG APGRGA PS RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3D8Q1 Small nuclear ribonucleoprotein Sm D3 | 4.3e-63 | 96.97 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRG APGRGA PS RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| A0A6J1F9D0 Small nuclear ribonucleoprotein Sm D3 | 5.0e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| A0A6J1FQ35 Small nuclear ribonucleoprotein Sm D3 | 1.1e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| A0A6J1IBE9 Small nuclear ribonucleoprotein Sm D3 | 5.0e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| A0A6J1IVB4 Small nuclear ribonucleoprotein Sm D3 | 1.1e-63 | 97.73 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGH+VSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGA GRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62318 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| P62320 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| P62323 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 55.04 | Show/hide |
Query: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GHIV+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| Q9LM92 Small nuclear ribonucleoprotein SmD3b | 1.6e-54 | 84.85 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GHIV+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGR AMR K A G GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| Q9S7E6 Small nuclear ribonucleoprotein SmD3a | 2.3e-53 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GHIVSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGR AMRAK G GG GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.1e-55 | 84.85 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GHIV+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGR AMR K A G GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| AT1G76300.1 snRNP core protein SMD3 | 1.6e-54 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GHIVSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
VGRGR AMRAK G GG GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGAPGRGAVPSARR
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 2.5e-07 | 28.93 | Show/hide |
Query: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGGAPGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGGAPGRG
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 5.1e-08 | 30.43 | Show/hide |
Query: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG---VGRGR
V+ L + VS+ELK+G + G++ + + N L+ + T K L+H+ +RG+ +R+ ++PD L + RIK K + G GRGR
Subjt: VKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG---VGRGR
Query: AVAMRAKAQAAGRGG
R + + GRGG
Subjt: AVAMRAKAQAAGRGG
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 2.4e-10 | 33.33 | Show/hide |
Query: IPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ ++++ +PD + + ++ R K +G GRGR
Subjt: IPVKLLHEAAGHIVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
Query: AVAMRAKAQAAGRGGAPGRG
V GGA GRG
Subjt: AVAMRAKAQAAGRGGAPGRG
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