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Sed0009635 (gene) of Chayote v1 genome

Gene IDSed0009635
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
Genome locationLG14:2784856..2785173
RNA-Seq ExpressionSed0009635
SyntenySed0009635
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7821986.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]6.2e-1140.43Show/hide
Query:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLA
        +  +SK +  G   E+VEA+A+ EG++ A  +   R+ +ESDA RV++LL     D+S +G ++EE L L  +F  I F+W+ R+AN +AH LA
Subjt:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLA

KAF7822031.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]5.3e-1039.36Show/hide
Query:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLA
        +  +SK +  G   E+VEA+A+ EG++ A  +   R+ +ESDA RV++LL     D+S +G + E+ L L  +F  I F+W+ R+AN +AH LA
Subjt:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLA

KAF8399913.1 hypothetical protein HHK36_015783 [Tetracentron sinense]1.3e-0840.21Show/hide
Query:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA
        M  +SK IS    A+ VEAMA  EG+  A  LGF+ V +E D+++VI    ++  DL  VG + E+   L  +F+   FS++ RD N++ H+LAQ+A
Subjt:  MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA

PRQ34202.1 putative ribonuclease H-like domain-containing protein [Rosa chinensis]1.7e-0839.56Show/hide
Query:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA
        P  G +    VEA+A+  G+  A  +GF R+E+E DAL +I  LQ + +DLS  G ++EE  RL  +FE+    ++ R+ N++AH LA+ A
Subjt:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA

PRQ37402.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]1.3e-0836.26Show/hide
Query:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA
        P +  +    VEA+A+ EG+  +  LG + +EVE DAL +I+ L    NDL+E+G ++E    L + FE++++  + + AN++AH LA+ A
Subjt:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA

TrEMBL top hitse value%identityAlignment
A0A2P6QJ46 Putative ribonuclease H-like domain-containing protein8.2e-0939.56Show/hide
Query:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA
        P  G +    VEA+A+  G+  A  +GF R+E+E DAL +I  LQ + +DLS  G ++EE  RL  +FE+    ++ R+ N++AH LA+ A
Subjt:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA

A0A2P6QT88 Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein6.3e-0936.26Show/hide
Query:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA
        P +  +    VEA+A+ EG+  +  LG + +EVE DAL +I+ L    NDL+E+G ++E    L + FE++++  + + AN++AH LA+ A
Subjt:  PISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFA

A0A7J8MZR8 RNase H domain-containing protein1.4e-0841.77Show/hide
Query:  DAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAH
        DA F+EA+   +G+++ L LGF++VEVE D++ VI  LQNQ  D+S +   +E+    +R+FE   F ++GR+AN  A+
Subjt:  DAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAH

A0A7J9CHG1 Uncharacterized protein4.1e-0841.18Show/hide
Query:  EAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFAAVELE
        EA+A  +GV++ L LGF  V +E D+L V+  LQN+  D+SE+  I+E+  R +R F    F+++GR+ N  AH LA+   V  E
Subjt:  EAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFAAVELE

M7ZRA5 RNase H domain-containing protein2.4e-0843.59Show/hide
Query:  EAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQ
        EA AI +G ++A  LG+++V +E+DA  V+ L  +  ND SE+  I++E   L RNFE    S+I R+AN LAH  A+
Subjt:  EAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTGTTTCAAAACCAATATCAGGTGGTGTGGATGCAGAGTTTGTGGAAGCTATGGCTATTCATGAAGGTGTGGAGATTGCTTTAACGTTGGGGTTCAAAAGAGT
TGAGGTTGAATCTGATGCCTTACGGGTGATACATTTACTTCAAAATCAAGCAAATGATCTTTCAGAGGTGGGTAGAATCGTTGAAGAAACTCTAAGGTTGGCACGCAACT
TTGAATACATTGATTTTAGTTGGATTGGACGAGATGCTAACAGGTTAGCTCATAATTTGGCGCAGTTTGCGGCTGTCGAGCTCGAAGAACATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTGTTTCAAAACCAATATCAGGTGGTGTGGATGCAGAGTTTGTGGAAGCTATGGCTATTCATGAAGGTGTGGAGATTGCTTTAACGTTGGGGTTCAAAAGAGT
TGAGGTTGAATCTGATGCCTTACGGGTGATACATTTACTTCAAAATCAAGCAAATGATCTTTCAGAGGTGGGTAGAATCGTTGAAGAAACTCTAAGGTTGGCACGCAACT
TTGAATACATTGATTTTAGTTGGATTGGACGAGATGCTAACAGGTTAGCTCATAATTTGGCGCAGTTTGCGGCTGTCGAGCTCGAAGAACATCAATGA
Protein sequenceShow/hide protein sequence
MFVVSKPISGGVDAEFVEAMAIHEGVEIALTLGFKRVEVESDALRVIHLLQNQANDLSEVGRIVEETLRLARNFEYIDFSWIGRDANRLAHNLAQFAAVELEEHQ