CuGenDBv2

Gene ID	Sed0009662
Organism	Sechium edule (Chayote v1)
Description	DEAD-box ATP-dependent RNA helicase
Genome location	LG10:704290..709994
RNA-Seq Expression	Sed0009662
Synteny	Sed0009662
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004386 - helicase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR001650 - Helicase, C-terminal IPR011545 - DEAD/DEAH box helicase domain IPR014001 - Helicase superfamily 1/2, ATP-binding domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6594446.1 DEAD-box ATP-dependent RNA helicase 1, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-266

92.44

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Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLK ALQN+GISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPEDFSV+LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLTH DD+NIIFPSYTSLP SAGSLKT RRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYM ICESKLKP+YLVALLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+L+IKEYSGLQRQSLRSKTLNAFR GE+QVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELLQPTYVSALEKLKEKVESE SRKSTIMS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDKKS
        SRVGKRKD NSS++KS
Subjt:  SRVGKRKDMNSSDKKS

XP_022146667.1 DEAD-box ATP-dependent RNA helicase 1 isoform X1 [Momordica charantia]

1.1e-265

92.41

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Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLKVALQ  GI+S+FPVQLAVW E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEIS LIKRPK EAGICYDPEDFSV LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLT ADDDNIIFPSYTSLP SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDP KL+QLDLHHPLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYMMICESKLKP+YLV+LLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+L IKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELL PTYVSALEKLKEKVESETS KST+MS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDK
        SRVGKRK+ NS++K
Subjt:  SRVGKRKDMNSSDK

XP_022146668.1 DEAD-box ATP-dependent RNA helicase 1 isoform X2 [Momordica charantia]

1.1e-265

92.41

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLKVALQ  GI+S+FPVQLAVW E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEIS LIKRPK EAGICYDPEDFSV LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLT ADDDNIIFPSYTSLP SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDP KL+QLDLHHPLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYMMICESKLKP+YLV+LLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+L IKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELL PTYVSALEKLKEKVESETS KST+MS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDK
        SRVGKRK+ NS++K
Subjt:  SRVGKRKDMNSSDK

XP_022926614.1 DEAD-box ATP-dependent RNA helicase 1 [Cucurbita moschata]

5.7e-267

92.64

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLK ALQN+GISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPEDFSV+LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLTH DD+NIIFPSYTSLP SAGSLKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYM ICESKLKP+YLVALLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+LKIKEYSGLQRQSLRSKTLNAFR GE+QVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLL KDEVRRFKKLLQKAD  SCPVHSLP SSIELLQPTYVSALEKLKEKVESE SRKSTIMS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDKKS
        SRVGKRKD NSS++KS
Subjt:  SRVGKRKDMNSSDKKS

XP_023517664.1 DEAD-box ATP-dependent RNA helicase 1 [Cucurbita pepo subsp. pepo]

5.7e-267

92.83

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLK ALQN+GISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPEDF V+LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLTH DD+NIIFPSYTSLP SAGSLKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYM ICESKLKP+YLVALLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+LKIKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELLQPTYVSALEKLKEKVESE SRKSTIMS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDKKS
        SRVGKRKD NSS++KS
Subjt:  SRVGKRKDMNSSDKKS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZ50 DEAD-box ATP-dependent RNA helicase 1

1.1e-263

92.07

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        MAE QKRK +PVLPWMRSPVDVSL EECP+ ILP LD RLKVALQN+GISSLFPVQLAVWQEAIGPGSF+RDLCINSPTGSGKTLAYALPIVQMLSSR++
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEIS LIKRPKLEAGICYDPED  V LQSSVDILVATPGRLMDHINFTKGFTL+HLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLREAYQSWLPTVLQLTHADD +IIFPSY S P SAGSLKTIRRFGVERGFKGKPYPRLAKM+LSATLTQDPGKLAQLDLHHPLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYMMICESKLKP+YLVALLQSLGEEKCIVFTSSVESTHRLC+LLNFF++LELKIKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTI-M
        DVEGV+NVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLL KDEV+RFKKLLQKAD  SCPVHSLP SSIE LQPTYVSALEKLKEKVESETSRKSTI  
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTI-M

Query:  SSRVGKRKDMNSSDKKS
        SSR GKRKD NSS  KS
Subjt:  SSRVGKRKDMNSSDKKS

A0A6J1CZ56 DEAD-box ATP-dependent RNA helicase 1 isoform X2

5.2e-266

92.41

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLKVALQ  GI+S+FPVQLAVW E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEIS LIKRPK EAGICYDPEDFSV LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLT ADDDNIIFPSYTSLP SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDP KL+QLDLHHPLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYMMICESKLKP+YLV+LLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+L IKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELL PTYVSALEKLKEKVESETS KST+MS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDK
        SRVGKRK+ NS++K
Subjt:  SRVGKRKDMNSSDK

A0A6J1D077 DEAD-box ATP-dependent RNA helicase 1 isoform X1

5.2e-266

92.41

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLKVALQ  GI+S+FPVQLAVW E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEIS LIKRPK EAGICYDPEDFSV LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLT ADDDNIIFPSYTSLP SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDP KL+QLDLHHPLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYMMICESKLKP+YLV+LLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+L IKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD  SCPVHSLP SSIELL PTYVSALEKLKEKVESETS KST+MS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDK
        SRVGKRK+ NS++K
Subjt:  SRVGKRKDMNSSDK

A0A6J1EFN8 DEAD-box ATP-dependent RNA helicase 1

2.8e-267

92.64

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLK ALQN+GISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPEDFSV+LQSSVDILVATPGRLMDHINFTKGFTLQHLR
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLTH DD+NIIFPSYTSLP SAGSLKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYM ICESKLKP+YLVALLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+LKIKEYSGLQRQSLRSKTLNAFR GE+QVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLL KDEVRRFKKLLQKAD  SCPVHSLP SSIELLQPTYVSALEKLKEKVESE SRKSTIMS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDKKS
        SRVGKRKD NSS++KS
Subjt:  SRVGKRKDMNSSDKKS

A0A6J1KPB8 DEAD-box ATP-dependent RNA helicase 1

2.2e-264

92.22

Show/hide

Query:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV
        M E QKRKS+PVLPWMRSPVDVSLFEECP+ ILP LDPRLK ALQN+GISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR+V
Subjt:  MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSV

Query:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR
        KCLRALVVLPTRDLALQVKEVF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPEDFSV+LQSSVDILVATPGRLMDHINFTKGFTLQHL 
Subjt:  KCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLR

Query:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR
        YLVIDETDRLLRE+YQSWLPTVLQLTH DD+NIIFPSYTSLP SAG LKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Subjt:  YLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR

Query:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM
        RYKLPEKLESYM ICESKLKP+YLVALLQSLG EKCIVFTSSVESTHRLCTLLNFFD+L+LKIKEYSGLQRQSLRSKTLNAFR GEIQVLVSSDAMTRGM
Subjt:  RYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGM

Query:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS
        DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKD VRRFKKLLQKAD  SCP HSLP SSIELLQPTYVSALEKLKEKVESE SRKSTIMS
Subjt:  DVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMS

Query:  SRVGKRKDMNSSDK
        SRVGKRKD NS++K
Subjt:  SRVGKRKDMNSSDK

SwissProt top hits

e value

%identity

Alignment

Q0DWT8 DEAD-box ATP-dependent RNA helicase 1

1.4e-180

65.5

Show/hide

Query:  VPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKCLRALVVL
        VP LPWMR+PVD+  F  CP+  LP LDPRL   LQ +GI S FPVQ+A W E IGPG+FERD+CINSPTGSGKTLAYALPIVQML++R V+CLRALVVL
Subjt:  VPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKCLRALVVL

Query:  PTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDR
        PTRDLALQVKEVF AIAP VGLSVG AVGQSSIADE+S+LI++ K       D E   +E Q+ VDILVATPGRLMDHI+ TKGF+L+HL+YLV+DETDR
Subjt:  PTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDR

Query:  LLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLE
        +LREAYQSWLPTV+QLT + D N  +            L TIRR GVERGFKGK +PRLAK+VLSATLTQDP KL+QL+L HPL L +GK+RY++P KL+
Subjt:  LLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLE

Query:  SYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVI
        SY ++C+S LKP+ L+ LLQ L  EKC+VFTSSVES+HRL TLL FF++L  K  EYS LQR+S R KTL+AF+EG+I VL+ +D M RG+ ++G+R VI
Subjt:  SYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVI

Query:  NYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKS
        NYDMP ++KTYIHRAGRTARAG+SG CFT L K EV+ F K+L+KAD  SC +HSLP  S+E L+P + SAL+KL+E +ESE ++KS
Subjt:  NYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKS

Q6DRI7 ATP-dependent RNA helicase DDX51

7.2e-79

38.9

Show/hide

Query:  PIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRSVKCLRALVVLPTRDLALQV
        PI  +P + P L   LQ  GI S FPVQ  V             +GPG +  RD+C+++PTGSGKTLA+ +P+VQ LS R V+ +RAL VLPT++LA QV
Subjt:  PIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRSVKCLRALVVLPTRDLALQV

Query:  KEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSW
          VFSA      L V +  GQ S A E ++L    ++  G+ +          S  DI+VATPGRL+DHIN    F+LQHLR+L+IDE DR++   +QSW
Subjt:  KEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSW

Query:  LPTVLQL---THADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHP-LFLTT---------GKRRYKLP
        L  V +    T  +    +F      P +A SL               P   L K++ SATLTQ+P KL  LDLH P LF +T          +  +  P
Subjt:  LPTVLQL---THADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHP-LFLTT---------GKRRYKLP

Query:  EKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGV
        + L  Y + C    KP+ ++  L  L     + FT+S E  HRL  L+  F  +E  + E+S       R KTL  F +G+I +L+S+DA  RG+D+ GV
Subjt:  EKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGV

Query:  RNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHS--LPPSSIELLQPTYVSALEKLKEKVESETSRK
        + VINYD P +I+TYIHR GRTARAG++G  FT L K + +RF K++  A GS  +    + P +++ ++  Y   L +L   V+ E  +K
Subjt:  RNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHS--LPPSSIELLQPTYVSALEKLKEKVESETSRK

Q6P9R1 ATP-dependent RNA helicase DDX51

1.3e-77

36.76

Show/hide

Query:  AENQKRKSVPVLP-WMRSP--VDVSLFEE-CPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAY
        A  +  K  P LP W+  P  V  S+ E+  PI  +P + P L+  L+  GI+S FPVQ AV             IG G ++  DLC+++PTGSGKTLA+
Subjt:  AENQKRKSVPVLP-WMRSP--VDVSLFEE-CPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAY

Query:  ALPIVQMLSSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDH
         +P+VQ L  R V  +RALVVLPT++LA QV +VF+       L V L  GQ S+A E  SL+++              +   +   DI+VATPGRL+DH
Subjt:  ALPIVQMLSSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDH

Query:  INFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPY-SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQ
        I+ T GF+LQ LR+L+IDE DR++   +QSWLP V+              Y+  P  S   L+  +   +       P   L K++ SATLTQDP KL +
Subjt:  INFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPY-SAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQ

Query:  LDLHHPLFLTT---------------GKRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQR
        L L+ P   +T                  +Y  P  L  + + C    KP+ ++ L+  +   + + FT+S E++HRL  L   F    + + E+S    
Subjt:  LDLHHPLFLTT---------------GKRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQR

Query:  QSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIE
           R K L  F +G+IQ+L+S+DA  RG+DV+GV  VINYD P +++TY+HR GRTARAG++G+ FTLL K + R+F +++ +A       H +P   ++
Subjt:  QSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD-GSCPVHSLPPSSIE

Query:  LLQPTYVSALEKLKEKVESETSRKS
         L   Y +AL +L++ V+ E   K+
Subjt:  LLQPTYVSALEKLKEKVESETSRKS

Q7FGZ2 DEAD-box ATP-dependent RNA helicase 1

1.6e-203

72.67

Show/hide

Query:  ENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKC
        +  K +   V+PWMR+PVDVS  E C +  LP L+P+LK AL+N+GISSLFPVQ+AVW E IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+C
Subjt:  ENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKC

Query:  LRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYL
        LRALVVLPTRDLALQVK+VF AIAPAVGLSVG AVGQSSIA EIS LIK PKL+AGICYDP+D S  L+S+VDILVATPGRLMDHIN TKGFTL+HLRYL
Subjt:  LRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYL

Query:  VIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS-LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRR
        V+DETDRLLREAYQSWLPTVLQLT   DD+ +FPS+T  +P + GSL+T+RR  VERGFKGKPYPRL KMVLSATLTQDP KL QLDLHHPLF+TTG  R
Subjt:  VIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS-LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRR

Query:  YKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMD
        Y+LPEKLE   +ICE+ +KPVYLVALL+S   EKCI+FTSSVE+T RLC LLNFF + ++K KEYSG   QSLRSK L AFR+G+IQVLV+SDA+TRGMD
Subjt:  YKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMD

Query:  VEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQK-ADGSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRK
        V+GV NVINYDMP F KT+IHRAGRTARAGQ+GRCFTLLS  EVRRF KLL+K    SCP++ +PP+S++ ++ TY  ALEKLKE VESE  +K
Subjt:  VEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQK-ADGSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRK

Q8N8A6 ATP-dependent RNA helicase DDX51

1.2e-81

38.05

Show/hide

Query:  KRKSVPVLP----WMRSP--VDVSLFEE-CPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYA
        KRK+  V P    W+  P  V  ++ E+  PI  +P + P L+  L+  GISS FPVQ AV             +G G +   DLC+++PTGSGKTLA+ 
Subjt:  KRKSVPVLP----WMRSP--VDVSLFEE-CPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYA

Query:  LPIVQMLSSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHI
        +P+VQ L SR V  +RALVVLPT++LA QV +VF+    A  L V L  GQ S+A E  SL+++              +   +   DI+VATPGRL+DHI
Subjt:  LPIVQMLSSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHI

Query:  NFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRF-GVERGFKGKPYPRLAKMVLSATLTQDPGKLAQL
        + T GF+LQ LR+L+IDE DR++   +QSWLP V+      +D          P    +L   R+   V       P   L K++ SATLTQ+P KL QL
Subjt:  NFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRF-GVERGFKGKPYPRLAKMVLSATLTQDPGKLAQL

Query:  DLHHPLFLTTG--------------KRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQS
         LH P   +TG                +Y  P  L  + + C    KP+ ++ L+  +G  + + FT+S E++HRL  L+  F  ++  + E+S      
Subjt:  DLHHPLFLTTG--------------KRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQS

Query:  LRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELL
         R   L  F +G+IQ+L+S+DA  RG+DV+GV  V+NYD P +++TY+HR GRTARAG++G+ FTLL K + RRF ++L +A       H L    ++ L
Subjt:  LRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADG-SCPVHSLPPSSIELL

Query:  QPTYVSALEKLKEKVESETSRKS
         P Y  AL +L+E V+ E  +++
Subjt:  QPTYVSALEKLKEKVESETSRKS

Arabidopsis top hits

e value

%identity

Alignment

AT4G15850.1 RNA helicase 1

1.1e-204

72.67

Show/hide

Query:  ENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKC
        +  K +   V+PWMR+PVDVS  E C +  LP L+P+LK AL+N+GISSLFPVQ+AVW E IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+C
Subjt:  ENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKC

Query:  LRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYL
        LRALVVLPTRDLALQVK+VF AIAPAVGLSVG AVGQSSIA EIS LIK PKL+AGICYDP+D S  L+S+VDILVATPGRLMDHIN TKGFTL+HLRYL
Subjt:  LRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYL

Query:  VIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS-LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRR
        V+DETDRLLREAYQSWLPTVLQLT   DD+ +FPS+T  +P + GSL+T+RR  VERGFKGKPYPRL KMVLSATLTQDP KL QLDLHHPLF+TTG  R
Subjt:  VIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS-LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRR

Query:  YKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMD
        Y+LPEKLE   +ICE+ +KPVYLVALL+S   EKCI+FTSSVE+T RLC LLNFF + ++K KEYSG   QSLRSK L AFR+G+IQVLV+SDA+TRGMD
Subjt:  YKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMD

Query:  VEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQK-ADGSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRK
        V+GV NVINYDMP F KT+IHRAGRTARAGQ+GRCFTLLS  EVRRF KLL+K    SCP++ +PP+S++ ++ TY  ALEKLKE VESE  +K
Subjt:  VEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQK-ADGSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRK

AT4G16630.1 DEA(D/H)-box RNA helicase family protein

7.2e-42

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Query:  ALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR--SVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQS
        A + +G     P+Q A    A+      RDLC ++ TGSGKT A+ALP ++ L  R   V   R L++ PTR+LA+Q+  +   +A    +  GL VG  
Subjt:  ALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR--SVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQS

Query:  SIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS
        S+ ++                      V L+S  DI+VATPGR++DH+  +    L  L  L++DE DRLL+  + + +  +++L               
Subjt:  SIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTS

Query:  LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESK--LKPVYLVALLQSLGEEKCIV
                                  R   M+ SAT+T++  +L +L L+ PL L+      + P   E  + I  ++   +   L++L     + K I+
Subjt:  LPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESK--LKPVYLVALLQSLGEEKCIV

Query:  FTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFT
        F+ + ++ HRL  L   F    LK  E  G   Q+ R  +L  FR+ E+  L+++D   RG+D+ GV+ VINY  P  I +Y+HR GRTARAG+ G   T
Subjt:  FTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFT

Query:  LLSKDEVRRFKKLLQKADGSCPVHSLPPSSI
         ++  +    K + +K         +P  SI
Subjt:  LLSKDEVRRFKKLLQKADGSCPVHSLPPSSI

AT5G26742.1 DEAD box RNA helicase (RH3)

5.0e-35

28.54

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Query:  LDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSS---------RSVKCLRALVVLPTRDLALQVKEVFSAIA
        L  RL+ +L+  GI+ LFP+Q AV    + P    RD+   + TG+GKTLA+ +PI++ L+          RS +  + LV+ PTR+LA QV++     A
Subjt:  LDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSS---------RSVKCLRALVVLPTRDLALQVKEVFSAIA

Query:  PAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLT
        P   LS     G  S   + S+L +                      VD++V TPGR++D I   +   L  + YLV+DE D++L   ++  + ++L+  
Subjt:  PAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLT

Query:  HADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFL-TTGKRRYKLPEKLESYMMICESKLKPVYLV
                            +L T R+                 M+ SAT+     KLA+  L +PL +   G +  KL E ++ Y +   S  K   L 
Subjt:  HADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFL-TTGKRRYKLPEKLESYMMICESKLKPVYLV

Query:  ALLQSLGE-EKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRA
         L+    +  K IVFT +      +   L    +  +  +   G   Q  R +TLNAFR+G+  VLV++D  +RG+D+  V  VI+Y++P   +T++HR+
Subjt:  ALLQSLGE-EKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRA

Query:  GRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHSLPPSSI
        GRT RAG+ G    + +  + R  + L  + D  C    + P ++
Subjt:  GRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHSLPPSSI

AT5G26742.2 DEAD box RNA helicase (RH3)

5.0e-35

28.54

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Query:  LDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSS---------RSVKCLRALVVLPTRDLALQVKEVFSAIA
        L  RL+ +L+  GI+ LFP+Q AV    + P    RD+   + TG+GKTLA+ +PI++ L+          RS +  + LV+ PTR+LA QV++     A
Subjt:  LDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSS---------RSVKCLRALVVLPTRDLALQVKEVFSAIA

Query:  PAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLT
        P   LS     G  S   + S+L +                      VD++V TPGR++D I   +   L  + YLV+DE D++L   ++  + ++L+  
Subjt:  PAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLT

Query:  HADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFL-TTGKRRYKLPEKLESYMMICESKLKPVYLV
                            +L T R+                 M+ SAT+     KLA+  L +PL +   G +  KL E ++ Y +   S  K   L 
Subjt:  HADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFL-TTGKRRYKLPEKLESYMMICESKLKPVYLV

Query:  ALLQSLGE-EKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRA
         L+    +  K IVFT +      +   L    +  +  +   G   Q  R +TLNAFR+G+  VLV++D  +RG+D+  V  VI+Y++P   +T++HR+
Subjt:  ALLQSLGE-EKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRA

Query:  GRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHSLPPSSI
        GRT RAG+ G    + +  + R  + L  + D  C    + P ++
Subjt:  GRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSCPVHSLPPSSI

AT5G60990.1 DEA(D/H)-box RNA helicase family protein

2.7e-41

29.82

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Query:  RDLCINSPTGSGKTLAYALPIVQML-----------SSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGI
        +D+   + TGSGKT A+A+PI+Q L             R      A V+ PTR+LA+Q+ E F A+   + L   + VG      +  +L KRP      
Subjt:  RDLCINSPTGSGKTLAYALPIVQML-----------SSRSVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGI

Query:  CYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERG
                        ++VATPGRL DH++ TKGF+L+ L+YLV+DE DRLL E ++  L  +L+    +    +F                        
Subjt:  CYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERG

Query:  FKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNL
                      SAT+T+   KL +  L +P+ +     +Y   + L+       +K K  YLV +L  + E   ++FT + + T  L  +L    +L
Subjt:  FKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPVYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNFFDNL

Query:  ELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSC
          +    SG   QS R   LN F+ GE  +LV +D  +RG+D+  V  VINYD+P   K YIHR GRTARAG+SG   +L+++ E+  + ++ +      
Subjt:  ELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADGSC

Query:  PVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMSSRVGKRKDMNSSDKKS
        P +  P    E+L     S LE++     +E  + S +     G RK     D++S
Subjt:  PVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMSSRVGKRKDMNSSDKKS

Sequences

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CDS sequence

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ATGGCGGAGAATCAGAAGCGAAAAAGCGTCCCTGTTCTACCATGGATGCGAAGCCCTGTCGACGTTTCTCTGTTCGAGGAATGCCCCATTGGGATTCTCCCTTTCCTCGA
TCCCAGATTGAAGGTAGCTTTGCAAAACGTGGGCATCTCTTCACTGTTTCCAGTCCAACTTGCAGTTTGGCAAGAAGCGATTGGGCCCGGTTCATTTGAGAGAGATTTAT
GTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCTCTACCGATCGTGCAAATGCTGTCAAGTCGTTCAGTCAAATGCTTGCGTGCTTTAGTTGTGTTGCCT
ACCCGTGATTTGGCTTTGCAGGTAAAAGAAGTTTTTAGTGCAATTGCTCCTGCAGTGGGCTTATCGGTAGGTCTGGCTGTTGGTCAATCCTCCATAGCAGATGAGATTTC
TAGTCTCATCAAGAGACCTAAGCTTGAGGCAGGCATCTGTTATGATCCTGAAGACTTTTCAGTTGAGTTGCAGAGTTCTGTGGACATATTGGTGGCAACACCTGGAAGAC
TGATGGACCATATAAATTTCACCAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTTATCGATGAGACCGATAGGTTATTAAGGGAAGCATATCAGTCTTGGCTACCT
ACTGTGCTTCAGTTGACACATGCGGATGATGATAATATCATTTTTCCTTCCTACACTTCACTTCCTTATTCTGCTGGATCCTTAAAAACCATAAGAAGATTTGGTGTTGA
GAGGGGTTTTAAGGGTAAACCTTATCCAAGGCTTGCAAAGATGGTTCTGTCTGCAACACTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCACCCTCTAT
TCTTAACAACTGGGAAAAGAAGATATAAACTTCCAGAGAAATTAGAATCATACATGATGATTTGTGAATCAAAACTCAAACCAGTATATCTGGTTGCCCTACTTCAAAGT
TTAGGAGAGGAAAAGTGTATTGTATTCACATCCTCTGTGGAGTCTACTCATCGACTATGCACATTACTGAACTTTTTTGACAACTTAGAACTCAAGATCAAAGAGTATTC
AGGGCTTCAACGTCAATCGCTAAGAAGCAAAACACTGAATGCTTTCCGGGAAGGGGAGATTCAAGTACTTGTTAGCTCTGATGCCATGACTCGTGGAATGGATGTTGAGG
GTGTGAGAAATGTTATTAATTATGATATGCCTGCATTTATTAAGACATATATTCATCGAGCTGGTCGGACTGCTAGGGCTGGGCAATCTGGGCGTTGTTTCACATTGCTA
AGTAAAGACGAGGTTAGGCGTTTCAAGAAATTACTACAAAAGGCTGATGGTTCTTGTCCCGTACATTCCCTACCTCCCAGCTCAATTGAGTTGCTCCAGCCTACTTACGT
CTCTGCCCTAGAGAAACTGAAGGAAAAGGTTGAATCAGAGACATCCAGAAAGAGTACAATCATGTCTTCTAGAGTGGGCAAACGGAAAGATATGAACTCCTCCGATAAAA
AGTCTTAG

mRNA sequence

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Protein sequence

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MAENQKRKSVPVLPWMRSPVDVSLFEECPIGILPFLDPRLKVALQNVGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRSVKCLRALVVLP
TRDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISSLIKRPKLEAGICYDPEDFSVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLP
TVLQLTHADDDNIIFPSYTSLPYSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPVYLVALLQS
LGEEKCIVFTSSVESTHRLCTLLNFFDNLELKIKEYSGLQRQSLRSKTLNAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLL
SKDEVRRFKKLLQKADGSCPVHSLPPSSIELLQPTYVSALEKLKEKVESETSRKSTIMSSRVGKRKDMNSSDKKS

Sed0009662 (gene) of Chayote v1 genome