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Sed0009666 (gene) of Chayote v1 genome

Gene IDSed0009666
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor WER-like
Genome locationLG11:1250939..1253148
RNA-Seq ExpressionSed0009666
SyntenySed0009666
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599384.1 Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4448.16Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                           ANDSNS K ND+ +D D NNKKQKKVINQT YPQP IC DN  +LAHD +RRN+EENREVT+ WNMD ITSSHYNIN P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA++  FN      FDDE YFD LDP FL EAF  SSV  SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

KAG7030370.1 Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-4448.16Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                           ANDSNS K ND+ +D D NNKKQKKVINQT YPQP IC DN  +LAHD +RRN+EENREVT+ WNMD ITSSHYNIN P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA++  FN      FDDE YFD LDP FL EAF  SSV  SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

XP_004139409.1 transcription factor WER [Cucumis sativus]1.1e-4950.2Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQPKKNLWKPEEDL    + +++VETHGEGNWA VSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                           AN+SNSCK NDD +  DGNNKKQKKVINQ  YPQP ICSDN TDLAHDI+RRN+EENRE  D WNMD ITSSHYNIN P++
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FN      FDDEPYFD LDP FLFEAF  SSVD SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

XP_022965906.1 transcription factor WER-like isoform X1 [Cucurbita maxima]3.4e-4347.35Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                            N+SNSCK    +D+ DGNNKKQKKVINQT YPQP +CSDN  + AHDI+RR++EENREVTD WNMD IT S+YNIN P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FN      FDDEPY++ LDP FL EAF  SSVD SLENM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

XP_038889962.1 transcription repressor MYB5 [Benincasa hispida]1.2e-4851.02Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQPKKNLWKPEEDL    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                           AN SNSCK NDD +D DGNNKKQKKVINQT YPQP ICSDN T+LAHD +RRN+EENREVTD W +D I SSHYNIN P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
         A+N+ FN      FDDEPYFD LDPLFLFEAF  SSVD SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

TrEMBL top hitse value%identityAlignment
A0A0A0LF88 SANT domain-containing protein2.5e-6073.65Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENRE
        MKQQPKKNLWKPEEDL    + +++VETHGEGNWA VSQESAN+SNSCK NDD +  DGNNKKQKKVINQ  YPQP ICSDN TDLAHDI+RRN+EENRE
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENRE

Query:  VTDTWNMDYITSSHYNINYPVVPAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
          D WNMD ITSSHYNIN P++PA+N  FN      FDDEPYFD LDP FLFEAF  SSVD SL+NM
Subjt:  VTDTWNMDYITSSHYNINYPVVPAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

A0A1S3C427 transcription factor WER-like2.1e-3862.76Show/hide
Query:  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
        +N+  TH   N     +  AN+SNSCK NDD +  DGNNKKQKKVINQT YPQP +  DN  DLAHDI+RRN+EENRE  +  NMD ITSSHYNIN P++
Subjt:  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FN      FDDEPYFD LDP FLFEAF  SSVD SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

A0A5D3BGT2 Transcription factor WER-like2.1e-3862.76Show/hide
Query:  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
        +N+  TH   N     +  AN+SNSCK NDD +  DGNNKKQKKVINQT YPQP +  DN  DLAHDI+RRN+EENRE  +  NMD ITSSHYNIN P++
Subjt:  QNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FN      FDDEPYFD LDP FLFEAF  SSVD SL+NM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

A0A6J1CPW3 transcription factor MYB82 isoform X21.7e-4045.31Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQPKKNLWKPEED+    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                           ANDS   K NDD DD D NNKKQKKVINQT YPQP ICS+N  ++AHD +R N+EE R VTD WNMD ITSSHY +N P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FNFDDEP+F         DP FL+EAF  S V+ SLE M
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

A0A6J1HMX7 transcription factor WER-like isoform X11.6e-4347.35Show/hide
Query:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------
        MKQQ KKNLWKPEEDL    + +N+VETHGEGNWATVSQES                                                           
Subjt:  MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQES-----------------------------------------------------------

Query:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV
                            N+SNSCK    +D+ DGNNKKQKKVINQT YPQP +CSDN  + AHDI+RR++EENREVTD WNMD IT S+YNIN P+V
Subjt:  -------------------ANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYITSSHYNINYPVV

Query:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM
        PA+N  FN      FDDEPY++ LDP FL EAF  SSVD SLENM
Subjt:  PAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM

SwissProt top hitse value%identityAlignment
Q9LTF7 Transcription factor MYB829.3e-0446Show/hide
Query:  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK
        K   K+ LWKPEED+    + +++VETHGEGNWA +S+ S       SC+
Subjt:  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK

Arabidopsis top hitse value%identityAlignment
AT5G52600.1 myb domain protein 826.6e-0546Show/hide
Query:  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK
        K   K+ LWKPEED+    + +++VETHGEGNWA +S+ S       SC+
Subjt:  KQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESA--NDSNSCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAACAGCCCAAGAAAAATTTATGGAAACCAGAAGAAGATTTGAGTCCCCAAGGGGTGACACAAAACTTTGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGT
CTCCCAGGAATCAGCTAATGACTCAAACAGCTGCAAGACAAATGATGACGTCGACGATGCCGATGGAAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTATCTATC
CACAACCACTAATATGCAGTGACAACAGGACAGATCTGGCACATGATATAAAGAGAAGAAACCGGGAAGAGAACAGAGAAGTTACAGATACTTGGAATATGGATTATATA
ACAAGTTCTCATTATAATATAAACTATCCAGTGGTACCTGCACATAACATGGTATTTAACTTTGACGACGAACCTTACTTTGACGACGAACCTTACTTTGACCGCCTTGA
TCCCTTATTCCTGTTTGAAGCATTTGCAAGCAGTAGTGTTGATCCATCACTGGAGAACATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAACAGCCCAAGAAAAATTTATGGAAACCAGAAGAAGATTTGAGTCCCCAAGGGGTGACACAAAACTTTGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGT
CTCCCAGGAATCAGCTAATGACTCAAACAGCTGCAAGACAAATGATGACGTCGACGATGCCGATGGAAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTATCTATC
CACAACCACTAATATGCAGTGACAACAGGACAGATCTGGCACATGATATAAAGAGAAGAAACCGGGAAGAGAACAGAGAAGTTACAGATACTTGGAATATGGATTATATA
ACAAGTTCTCATTATAATATAAACTATCCAGTGGTACCTGCACATAACATGGTATTTAACTTTGACGACGAACCTTACTTTGACGACGAACCTTACTTTGACCGCCTTGA
TCCCTTATTCCTGTTTGAAGCATTTGCAAGCAGTAGTGTTGATCCATCACTGGAGAACATGTAA
Protein sequenceShow/hide protein sequence
MKQQPKKNLWKPEEDLSPQGVTQNFVETHGEGNWATVSQESANDSNSCKTNDDVDDADGNNKKQKKVINQTIYPQPLICSDNRTDLAHDIKRRNREENREVTDTWNMDYI
TSSHYNINYPVVPAHNMVFNFDDEPYFDDEPYFDRLDPLFLFEAFASSSVDPSLENM