; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009676 (gene) of Chayote v1 genome

Gene IDSed0009676
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG05:44225301..44226575
RNA-Seq ExpressionSed0009676
SyntenySed0009676
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457622.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo]1.2e-6448.2Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDE+PMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRACAGLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDITS VHLQ                        LG +EDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +   + ++ +++                                    
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------

Query:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LYAGFGLWNEI+ LR FVRKE LYK VG
Subjt:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG

XP_022944055.1 pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata]8.8e-6347.01Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        MHAFVGKS WL S                     KVFDEIP+KN VCANALLA Y +A MW++      L++LR+M+VLDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDI+S VHLQ                        LG+KEDGKRDII+WTSM S Y  NGC+ RVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------
        VISACGHT +VNLGV+YFDSMQS F LE  ++HYS              +W +   M +  +++            H  IK                   
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------

Query:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LY+GFGLWNEI+ LRGFVR+E L+K VG
Subjt:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG

XP_022986554.1 pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita maxima]4.3e-6247.01Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        MHAFVGKS WL S                     KVFDEIP+KN VCANALLA Y +A MW +      L++LR+MHVLDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDI+S VHLQ                        LG+KEDGKRDII+WTSM S Y  NGC+ RVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------
        VISACGHT +VNLGV+YFDSMQS F LE  ++HYS              +W +   M +  +++            H  IK                   
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------

Query:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LY+GFGLWNEI+ LR FVR+E L+K VG
Subjt:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG

XP_031736718.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sativus]6.7e-6348.05Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDE+PMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDITS VHLQ                        LG++EDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGI-----GQSMNAQCWD--------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +      +  N   W                                 
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGI-----GQSMNAQCWD--------------------------------

Query:  IHYAIKLYAGFGLWNEIKQLRGFVRKE-LYKAV
        +     LYAGFGLWNEI+ LR  VRKE LYK V
Subjt:  IHYAIKLYAGFGLWNEIKQLRGFVRKE-LYKAV

XP_038901137.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida]2.1e-6448.21Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDEIPMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRACAGLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDIT  VHLQ                        L +KEDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEG KPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIHYAI--------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +   + +  WD + ++                                
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIHYAI--------------------------------

Query:  -------KLYAGFGLWNEIKQLRGFVRKE-LYKAVG
                LYAGFGLWNEI++LR FVRKE LYK VG
Subjt:  -------KLYAGFGLWNEIKQLRGFVRKE-LYKAVG

TrEMBL top hitse value%identityAlignment
A0A0A0LLD6 Uncharacterized protein3.2e-6348.05Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDE+PMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDITS VHLQ                        LG++EDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGI-----GQSMNAQCWD--------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +      +  N   W                                 
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGI-----GQSMNAQCWD--------------------------------

Query:  IHYAIKLYAGFGLWNEIKQLRGFVRKE-LYKAV
        +     LYAGFGLWNEI+ LR  VRKE LYK V
Subjt:  IHYAIKLYAGFGLWNEIKQLRGFVRKE-LYKAV

A0A1S3C6K8 pentatricopeptide repeat-containing protein At2g13600-like5.9e-6548.2Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDE+PMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRACAGLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDITS VHLQ                        LG +EDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +   + ++ +++                                    
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------

Query:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LYAGFGLWNEI+ LR FVRKE LYK VG
Subjt:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG

A0A5D3BKX2 Pentatricopeptide repeat-containing protein5.9e-6548.2Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        +HAFVGKS WL S                     +VFDE+PMKN VCANALLA Y EARMWVE      L++LR+M  LDLKYD FTLSASLRACAGLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDITS VHLQ                        LG +EDGKRDII+WTSM SVY  NGC+KRVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------
        VISACGHT EVNLGV+YFDSMQSDF LE  ++HYS              +W +   + ++ +++                                    
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDIH-----------------------------------

Query:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LYAGFGLWNEI+ LR FVRKE LYK VG
Subjt:  --YAIKLYAGFGLWNEIKQLRGFVRKE-LYKAVG

A0A6J1FYF9 pentatricopeptide repeat-containing protein At1g50270-like4.2e-6347.01Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        MHAFVGKS WL S                     KVFDEIP+KN VCANALLA Y +A MW++      L++LR+M+VLDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDI+S VHLQ                        LG+KEDGKRDII+WTSM S Y  NGC+ RVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------
        VISACGHT +VNLGV+YFDSMQS F LE  ++HYS              +W +   M +  +++            H  IK                   
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------

Query:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LY+GFGLWNEI+ LRGFVR+E L+K VG
Subjt:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG

A0A6J1JGD1 pentatricopeptide repeat-containing protein At1g50270-like2.1e-6247.01Show/hide
Query:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA
        MHAFVGKS WL S                     KVFDEIP+KN VCANALLA Y +A MW +      L++LR+MHVLDLKYD FTLSASLRAC GLSA
Subjt:  MHAFVGKSSWLGS---------------------KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSA

Query:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR
                       YDI+S VHLQ                        LG+KEDGKRDII+WTSM S Y  NGC+ RVIELYNQMLMEGIKPD V FV 
Subjt:  ---------------YDITSVVHLQR-----------------------LGKKEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVR

Query:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------
        VISACGHT +VNLGV+YFDSMQS F LE  ++HYS              +W +   M +  +++            H  IK                   
Subjt:  VISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL-------------SWGIGQSMNAQCWDI------------HYAIK-------------------

Query:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG
              LY+GFGLWNEI+ LR FVR+E L+K VG
Subjt:  ------LYAGFGLWNEIKQLRGFVRKE-LYKAVG

SwissProt top hitse value%identityAlignment
O49287 Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial1.9e-1528.46Show/hide
Query:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI--------------------TSVVHLQ-RLG
        +VF+ I  K+L+  N++   + +    VE      L+   QMH LDL  D  +LS+ + ACA +S+ ++                    +S++ L  + G
Subjt:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI--------------------TSVVHLQ-RLG

Query:  KKEDGKR--------DIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSLSWGIGQS
          E G+R        D + W SM S Y TNG     I+L+ +M + GI+P  + F+ V++AC +   V  G + F+SM+ D      K+H+S        
Subjt:  KKEDGKR--------DIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSLSWGIGQS

Query:  MNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKELYKAVG
        + A+   +  AI L           +W+ I  LRG V    YKA+G
Subjt:  MNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKELYKAVG

O49399 Pentatricopeptide repeat-containing protein At4g188409.2e-1528.27Show/hide
Query:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVHL---------------------QRLG
        +VFD +P++++V  NA++  Y     + EV  + + KML        K D FTL + L ACA L +      VH+                      + G
Subjt:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVHL---------------------QRLG

Query:  K--------KEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY
        K        +   KRD+  W S+ S    +G  K  +E++++M+ EG KP+ + F+ V+SAC H   ++   + F+ M S +R+E + +HY
Subjt:  K--------KEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY

Q9CAY1 Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial2.2e-1628.35Show/hide
Query:  GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI---------------------TSVVHLQR
        G ++FDE+P+K L+  NA+++ Y +  +  +V     L++  QM    +  D FTL + L +CA L A  I                      S+    R
Subjt:  GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI---------------------TSVVHLQR

Query:  LGKKEDGK--------RDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYS
         G     +        + ++ WT+M   Y  +G  +  + L++ M+  GI+PD  VFV V+SAC H+   + G+E F +M+ +++LE   +HYS
Subjt:  LGKKEDGK--------RDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYS

Q9LXY5 Pentatricopeptide repeat-containing protein At3g565507.1e-1526.8Show/hide
Query:  LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVH---------------------LQ
        + SKVFDE+P+++LV  N ++  +    +  +      L M ++M    +  D +TL A L +CA +SA ++  ++H                       
Subjt:  LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVH---------------------LQ

Query:  RLGKKEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY
        + G  E+         KRD++ W SM   Y  +G     I  + +M+  G++P+++ F+ ++  C H   V  GVE+F+ M S F L  + KHY
Subjt:  RLGKKEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic2.9e-1628.65Show/hide
Query:  VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYD--------------------ITSVVHLQ-RLGK
        +FDE+P +N V  N++++ +     + +      L M R+M   D+K D FT+ + L ACA L A +                    +T+++ +  + G 
Subjt:  VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYD--------------------ITSVVHLQ-RLGK

Query:  KEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL
         E+G        K+ +  W SM      NG  +R ++L++++   G++PDSV F+ V++AC H+ EV+   E+F  M+  + +E S KHY+L
Subjt:  KEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL

Arabidopsis top hitse value%identityAlignment
AT1G77010.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-1628.46Show/hide
Query:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI--------------------TSVVHLQ-RLG
        +VF+ I  K+L+  N++   + +    VE      L+   QMH LDL  D  +LS+ + ACA +S+ ++                    +S++ L  + G
Subjt:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI--------------------TSVVHLQ-RLG

Query:  KKEDGKR--------DIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSLSWGIGQS
          E G+R        D + W SM S Y TNG     I+L+ +M + GI+P  + F+ V++AC +   V  G + F+SM+ D      K+H+S        
Subjt:  KKEDGKR--------DIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSLSWGIGQS

Query:  MNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKELYKAVG
        + A+   +  AI L           +W+ I  LRG V    YKA+G
Subjt:  MNAQCWDIHYAIKLYAGF------GLWNEIKQLRGFVRKELYKAVG

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.0e-1728.65Show/hide
Query:  VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYD--------------------ITSVVHLQ-RLGK
        +FDE+P +N V  N++++ +     + +      L M R+M   D+K D FT+ + L ACA L A +                    +T+++ +  + G 
Subjt:  VFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYD--------------------ITSVVHLQ-RLGK

Query:  KEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL
         E+G        K+ +  W SM      NG  +R ++L++++   G++PDSV F+ V++AC H+ EV+   E+F  M+  + +E S KHY+L
Subjt:  KEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSL

AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1728.35Show/hide
Query:  GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI---------------------TSVVHLQR
        G ++FDE+P+K L+  NA+++ Y +  +  +V     L++  QM    +  D FTL + L +CA L A  I                      S+    R
Subjt:  GSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDI---------------------TSVVHLQR

Query:  LGKKEDGK--------RDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYS
         G     +        + ++ WT+M   Y  +G  +  + L++ M+  GI+PD  VFV V+SAC H+   + G+E F +M+ +++LE   +HYS
Subjt:  LGKKEDGK--------RDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYS

AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-1626.8Show/hide
Query:  LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVH---------------------LQ
        + SKVFDE+P+++LV  N ++  +    +  +      L M ++M    +  D +TL A L +CA +SA ++  ++H                       
Subjt:  LGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVH---------------------LQ

Query:  RLGKKEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY
        + G  E+         KRD++ W SM   Y  +G     I  + +M+  G++P+++ F+ ++  C H   V  GVE+F+ M S F L  + KHY
Subjt:  RLGKKEDG--------KRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.6e-1628.27Show/hide
Query:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVHL---------------------QRLG
        +VFD +P++++V  NA++  Y     + EV  + + KML        K D FTL + L ACA L +      VH+                      + G
Subjt:  KVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVHL---------------------QRLG

Query:  K--------KEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY
        K        +   KRD+  W S+ S    +G  K  +E++++M+ EG KP+ + F+ V+SAC H   ++   + F+ M S +R+E + +HY
Subjt:  K--------KEDGKRDIIVWTSMHSVYETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGCCTTTGTGGGGAAATCAAGTTGGTTAGGCAGTAAAGTGTTTGATGAAATTCCCATGAAGAATCTTGTGTGTGCCAATGCACTACTGGCTGAATATGATGAGGC
TAGGATGTGGGTCGAGGTGTCAAGGATCCCACACTTAAAAATGCTGCGGCAGATGCATGTTTTGGATTTGAAGTACGATCACTTCACTCTGTCGGCTTCTTTACGTGCAT
GTGCTGGCTTATCTGCTTATGATATTACTAGTGTTGTACATTTACAAAGACTTGGAAAAAAAGAAGATGGTAAAAGGGATATTATAGTGTGGACTTCTATGCATAGTGTA
TATGAAACAAACGGGTGTCACAAAAGAGTGATTGAACTGTACAACCAGATGTTGATGGAAGGCATCAAACCAGACAGTGTGGTTTTTGTGAGAGTCATATCAGCTTGTGG
TCATACTAGAGAGGTGAATCTTGGAGTCGAGTACTTTGATTCCATGCAGAGTGATTTTCGGTTGGAACTTAGTAAAAAACACTACAGTTTGAGCTGGGGAATTGGACAGA
GTATGAATGCTCAATGCTGGGATATTCATTATGCTATCAAACTATATGCTGGTTTTGGCTTGTGGAATGAGATTAAGCAATTGAGGGGATTTGTGAGAAAAGAACTGTAT
AAAGCAGTTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGCCTTTGTGGGGAAATCAAGTTGGTTAGGCAGTAAAGTGTTTGATGAAATTCCCATGAAGAATCTTGTGTGTGCCAATGCACTACTGGCTGAATATGATGAGGC
TAGGATGTGGGTCGAGGTGTCAAGGATCCCACACTTAAAAATGCTGCGGCAGATGCATGTTTTGGATTTGAAGTACGATCACTTCACTCTGTCGGCTTCTTTACGTGCAT
GTGCTGGCTTATCTGCTTATGATATTACTAGTGTTGTACATTTACAAAGACTTGGAAAAAAAGAAGATGGTAAAAGGGATATTATAGTGTGGACTTCTATGCATAGTGTA
TATGAAACAAACGGGTGTCACAAAAGAGTGATTGAACTGTACAACCAGATGTTGATGGAAGGCATCAAACCAGACAGTGTGGTTTTTGTGAGAGTCATATCAGCTTGTGG
TCATACTAGAGAGGTGAATCTTGGAGTCGAGTACTTTGATTCCATGCAGAGTGATTTTCGGTTGGAACTTAGTAAAAAACACTACAGTTTGAGCTGGGGAATTGGACAGA
GTATGAATGCTCAATGCTGGGATATTCATTATGCTATCAAACTATATGCTGGTTTTGGCTTGTGGAATGAGATTAAGCAATTGAGGGGATTTGTGAGAAAAGAACTGTAT
AAAGCAGTTGGATAG
Protein sequenceShow/hide protein sequence
MHAFVGKSSWLGSKVFDEIPMKNLVCANALLAEYDEARMWVEVSRIPHLKMLRQMHVLDLKYDHFTLSASLRACAGLSAYDITSVVHLQRLGKKEDGKRDIIVWTSMHSV
YETNGCHKRVIELYNQMLMEGIKPDSVVFVRVISACGHTREVNLGVEYFDSMQSDFRLELSKKHYSLSWGIGQSMNAQCWDIHYAIKLYAGFGLWNEIKQLRGFVRKELY
KAVG