; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009685 (gene) of Chayote v1 genome

Gene IDSed0009685
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:46764778..46765173
RNA-Seq ExpressionSed0009685
SyntenySed0009685
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025124.1 hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa]4.2e-4175.59Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG----GSGGRRVSPASISAEQRLALV
        MI+GKQ+ SPNG FRRLFRARCRK+A+ N LLEAIAK+S +GT  VS  EENGVVRIKMVVKK DLAQ LE+MGG    G GG  V+ AS+S EQRLA+V
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG----GSGGRRVSPASISAEQRLALV

Query:  RRKQILRAKLAAATWSPALQSIPEEID
        RRKQ+LRAKLAAATWSPALQSIPEEID
Subjt:  RRKQILRAKLAAATWSPALQSIPEEID

KAG6572129.1 hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4075Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRRVSPASISAEQRLALVRRKQ
        MIDGKQ +SPNG FRRLFRAR RKNA+ +NLLEAIAK S +GT  VSQ EE+GVVRIKMVVKK DLAQ LE++ GG GG  V+PAS+S E RLA++RRKQ
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRRVSPASISAEQRLALVRRKQ

Query:  ILRAKLAAATWSPALQSIPEEIDE
         LRAKLAAATWSPALQSIPE  DE
Subjt:  ILRAKLAAATWSPALQSIPEEIDE

KGN43274.1 hypothetical protein Csa_020212 [Cucumis sativus]2.7e-4074.19Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRR-VSPASISAEQRLALVRRK
        MI+GKQ++SPNG FRRLFRARCRK+A+ N LLEAIAK+S +G   VS  EENGVVRIKMVVKK DL Q LE+MGGG GG   V+PAS+S E RL ++RRK
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRR-VSPASISAEQRLALVRRK

Query:  QILRAKLAAATWSPALQSIPEEID
        Q LRAKLAAATWSPALQSIPEEID
Subjt:  QILRAKLAAATWSPALQSIPEEID

PON89926.1 hypothetical protein TorRG33x02_142120 [Trema orientale]8.9e-1554.17Show/hide
Query:  RLFRARCRK---NARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG---GSGGRRVS--PASISAEQRLALVRRKQIL-RAKL
        RL RAR  +   N R+N LL+AIAKS+G     VSQ EE+GVVR+K+VV+K DL Q LE MGG   G+G    S    S SAEQRL+L+R+K +L RA L
Subjt:  RLFRARCRK---NARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG---GSGGRRVS--PASISAEQRLALVRRKQIL-RAKL

Query:  A----AATWSPALQSIPEEI
        A     ++WSP LQSIPEE+
Subjt:  A----AATWSPALQSIPEEI

XP_023511743.1 uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]3.8e-4278.05Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRRVSPASISAEQRLALVRRKQ
        MIDGKQ +SPNG FRRLFRAR RKNA+ +NLLEAIAK S +GT  VSQ EE+GVVRIKMVVKK DLAQ LE+M GG GG  V+PAS+S EQRLA++RRKQ
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRRVSPASISAEQRLALVRRKQ

Query:  ILRAKLAAATWSPALQSIPEEID
         LRAKLAAATWSPALQSIPEEID
Subjt:  ILRAKLAAATWSPALQSIPEEID

TrEMBL top hitse value%identityAlignment
A0A0A0K2L8 Uncharacterized protein1.3e-4074.19Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRR-VSPASISAEQRLALVRRK
        MI+GKQ++SPNG FRRLFRARCRK+A+ N LLEAIAK+S +G   VS  EENGVVRIKMVVKK DL Q LE+MGGG GG   V+PAS+S E RL ++RRK
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRR-VSPASISAEQRLALVRRK

Query:  QILRAKLAAATWSPALQSIPEEID
        Q LRAKLAAATWSPALQSIPEEID
Subjt:  QILRAKLAAATWSPALQSIPEEID

A0A2N9HB17 Uncharacterized protein4.3e-1549.18Show/hide
Query:  PNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGR-----RVSPASISAEQRLALVRRKQILRA
        P  VF+ + RAR  KN+RT N+LE +   +G G   VS  EE+GVVR+K++VKK DL Q LE MGGG   +      ++P S+SAEQRL L+++K +LRA
Subjt:  PNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGR-----RVSPASISAEQRLALVRRKQILRA

Query:  KLA----AATWSPALQSIPEEI
               +++WSPALQSIPEE+
Subjt:  KLA----AATWSPALQSIPEEI

A0A2P5EWK1 Uncharacterized protein4.3e-1554.17Show/hide
Query:  RLFRARCRK---NARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG---GSGGRRVS--PASISAEQRLALVRRKQIL-RAKL
        RL RAR  +   N R+N LL+AIAKS+G     VSQ EE+GVVR+K+VV+K DL Q LE MGG   G+G    S    S SAEQRL+L+R+K +L RA L
Subjt:  RLFRARCRK---NARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG---GSGGRRVS--PASISAEQRLALVRRKQIL-RAKL

Query:  A----AATWSPALQSIPEEI
        A     ++WSP LQSIPEE+
Subjt:  A----AATWSPALQSIPEEI

A0A5A7SHL7 Uncharacterized protein2.0e-4175.59Show/hide
Query:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG----GSGGRRVSPASISAEQRLALV
        MI+GKQ+ SPNG FRRLFRARCRK+A+ N LLEAIAK+S +GT  VS  EENGVVRIKMVVKK DLAQ LE+MGG    G GG  V+ AS+S EQRLA+V
Subjt:  MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGG----GSGGRRVSPASISAEQRLALV

Query:  RRKQILRAKLAAATWSPALQSIPEEID
        RRKQ+LRAKLAAATWSPALQSIPEEID
Subjt:  RRKQILRAKLAAATWSPALQSIPEEID

A0A7N2N056 Uncharacterized protein3.5e-1750Show/hide
Query:  SPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGR---RVSPA---SISAEQRLALVRRKQIL
        +P  VFR+ FRA+ +KN+R +++LE +   +G G   VS IE++GVVR+K+VVKK DL Q LE MGGG GG+    + P+   S+SAEQRL L+++K +L
Subjt:  SPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGR---RVSPA---SISAEQRLALVRRKQIL

Query:  RA----KLAAATWSPALQSIPEEI
        RA    + ++++WSPALQSIPEE+
Subjt:  RA----KLAAATWSPALQSIPEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGACGGGAAGCAGATATCGTCACCGAACGGAGTTTTCCGGCGACTTTTCAGAGCACGGTGCCGGAAAAATGCGAGGACCAATAATCTATTGGAAGCCATTGCCAA
ATCAAGCGGAGATGGAACTGCTTCTGTTTCTCAGATCGAAGAAAACGGAGTCGTAAGGATCAAGATGGTGGTGAAGAAGGCGGATTTGGCTCAATTTCTGGAATCCATGG
GCGGCGGAAGCGGCGGCCGCAGAGTTTCTCCGGCGTCGATCTCCGCCGAACAACGGCTGGCGCTTGTTAGACGAAAGCAAATTCTCCGAGCCAAACTTGCGGCTGCGACT
TGGAGTCCGGCGCTGCAGAGCATTCCTGAAGAGATCGATGAAGAAAACGATCGGCTTCGTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGACGGGAAGCAGATATCGTCACCGAACGGAGTTTTCCGGCGACTTTTCAGAGCACGGTGCCGGAAAAATGCGAGGACCAATAATCTATTGGAAGCCATTGCCAA
ATCAAGCGGAGATGGAACTGCTTCTGTTTCTCAGATCGAAGAAAACGGAGTCGTAAGGATCAAGATGGTGGTGAAGAAGGCGGATTTGGCTCAATTTCTGGAATCCATGG
GCGGCGGAAGCGGCGGCCGCAGAGTTTCTCCGGCGTCGATCTCCGCCGAACAACGGCTGGCGCTTGTTAGACGAAAGCAAATTCTCCGAGCCAAACTTGCGGCTGCGACT
TGGAGTCCGGCGCTGCAGAGCATTCCTGAAGAGATCGATGAAGAAAACGATCGGCTTCGTAACTAA
Protein sequenceShow/hide protein sequence
MIDGKQISSPNGVFRRLFRARCRKNARTNNLLEAIAKSSGDGTASVSQIEENGVVRIKMVVKKADLAQFLESMGGGSGGRRVSPASISAEQRLALVRRKQILRAKLAAAT
WSPALQSIPEEIDEENDRLRN