; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009719 (gene) of Chayote v1 genome

Gene IDSed0009719
OrganismSechium edule (Chayote v1)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationLG06:2698672..2702140
RNA-Seq ExpressionSed0009719
SyntenySed0009719
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]2.7e-9495.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]3.5e-9494.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022155080.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Momordica charantia]2.1e-9496.17Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRQLKFHEQKLLKKVNFLEWKREG HREAQVM RYH+TGRDDYKKYS+LCR VQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]7.8e-9494.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HRE QVMHRYHITGRDDYKKYS++CRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETV +PAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]1.0e-9393.99Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMN+KDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein1.7e-9494.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.3e-9495.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X16.5e-9494.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HREAQVMHRYHITGRDDYKKYS+LCRGVQKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1DLF0 U3 small nucleolar ribonucleoprotein protein IMP31.0e-9496.17Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRQLKFHEQKLLKKVNFLEWKREG HREAQVM RYH+TGRDDYKKYS+LCR VQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVT+PAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP33.8e-9494.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREG HRE QVMHRYHITGRDDYKKYS++CRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETV +PAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp36.8e-4848.09Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKR-EGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  + NHR+  VM RYHI+ R++Y+KY+ +C   ++L   L  ++  DPFRL+    LLEKL+++G++P++  + ++ ++
Subjt:  MRQLKFHEQKLLKKVNFLEWKR-EGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+R+GP  +T+PA+LVTR++EDF+TW D+SKIKR + +YNDKLDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

P32899 U3 small nucleolar ribonucleoprotein protein IMP34.2e-5050.56Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL
        +R+LK HEQKLLKKV+FLEWK++  HR+ QVM  YHI  R+DY KY+ +C  +++L + L  +   DPFR +  + LL+KLY +GV+ T+  + +L +++
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+R+GP  + +PA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP37.5e-5556.11Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  + N  E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+R+GP+ VT+PAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP32.6e-5556.11Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  + N  E +V+ RY +  R++Y +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+R+GP+ VT+PAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP39.7e-5556.11Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  + N  E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+R+GP+ VT+PAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S41.7e-0623.61Show/hide
Query:  WKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIR+G + V  P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein3.4e-7976.24Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LK+HE+KL+KKVNFLEWKREGNHRE ++ +RYH+  RDDYKKYS LCR VQKL +++K+M+  DPFR+++T+ LLEKLYN+GVIPTR+SL L +RLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+R+GPET+T+PAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

AT5G39850.1 Ribosomal protein S41.0e-0625.38Show/hide
Query:  WKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRIGPETVTEPAFLV
        A+ +  A   I Q HIR+G + V  P+F+V
Subjt:  AEHLREAVTYIEQGHIRIGPETVTEPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGCTGAAATTCCACGAGCAGAAGCTGTTGAAGAAGGTGAATTTCTTGGAATGGAAGAGGGAAGGAAATCACAGAGAAGCTCAAGTCATGCATCGCTATCACAT
CACCGGAAGAGACGATTACAAAAAGTATTCGACTCTGTGTCGGGGCGTTCAGAAGCTGGTTTCCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTAGAGTTGA
CTGAGAAGCTCCTTGAGAAGTTGTACAATATTGGCGTGATACCAACCCGACAGAGCTTGAATTTATGCGACCGCTTGTCGGTGTCATCCTTTTGCAGACGAAGGCTATCG
ACAGTGTTGGTACGTTTGAAGTTCGCCGAGCACTTGAGGGAAGCCGTTACGTACATCGAGCAAGGGCACATTAGAATTGGTCCGGAGACGGTTACTGAACCAGCATTTCT
AGTTACAAGGAATATGGAGGACTTCATAACTTGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGTT
GA
mRNA sequenceShow/hide mRNA sequence
GAAGATATCTGTCTACCTTGATAATTTTTACTTTTCAATAAATCAACAATATTTTTGTATCCTGCCTTTCTCTCCAATTCGTCGGGCTTATTAGGGTTTCATTCGCCGTA
TCTTTCTCTCGCGCCGCTCGTTTTTCCGGCGAGATTCGTCTGAAGAAGCGAAATCATGAGGCAGCTGAAATTCCACGAGCAGAAGCTGTTGAAGAAGGTGAATTTCTTGG
AATGGAAGAGGGAAGGAAATCACAGAGAAGCTCAAGTCATGCATCGCTATCACATCACCGGAAGAGACGATTACAAAAAGTATTCGACTCTGTGTCGGGGCGTTCAGAAG
CTGGTTTCCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTAGAGTTGACTGAGAAGCTCCTTGAGAAGTTGTACAATATTGGCGTGATACCAACCCGACAGAG
CTTGAATTTATGCGACCGCTTGTCGGTGTCATCCTTTTGCAGACGAAGGCTATCGACAGTGTTGGTACGTTTGAAGTTCGCCGAGCACTTGAGGGAAGCCGTTACGTACA
TCGAGCAAGGGCACATTAGAATTGGTCCGGAGACGGTTACTGAACCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACTTGGGTTGATTCATCAAAGATAAAG
AGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGTTGATATGTATTCTGTCCAAGTTTTGGTTTTTTTGCCCAACCTCTTATGAACCTAAG
TTTAGATATGAGAATTAGAAATATGAGCTTATTTTACTTACCAAACCTGCCATGAACTTGTTAAGATATACATTGATTTTGTTTGATAATTGATTTTATGTATTGTTATG
TATTTATTATTTTATAATTATTGAAGCAGGTTCGAGACTCACTTGTAA
Protein sequenceShow/hide protein sequence
MRQLKFHEQKLLKKVNFLEWKREGNHREAQVMHRYHITGRDDYKKYSTLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRIGPETVTEPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC