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Sed0009750 (gene) of Chayote v1 genome

Gene IDSed0009750
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:8766517..8767281
RNA-Seq ExpressionSed0009750
SyntenySed0009750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132041.1 uncharacterized protein LOC111005007 [Momordica charantia]2.4e-4860.33Show/hide
Query:  NNGAACSKSH----VECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------------
        +NGAA +KS     +ECCMCGDFG S++LF CK+CQ+RSQH+YCSNLYPKA+C RICNWCL+ +EESK KSPNSSN ST                     
Subjt:  NNGAACSKSH----VECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------------

Query:  --KDQIRTFQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
          KDQIRTFQ Q+NRPIKKQR PE        P P  ARRRP+AV++ LRRTRSE+I  R+  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  --KDQIRTFQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

XP_022951049.1 uncharacterized protein LOC111454013 [Cucurbita moschata]1.1e-4864.57Show/hide
Query:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT
        MT    A A S S  ECCMCGDFG S +LF CK+CQFRSQH+YCSNLYPKADC RICNWCL  +EESK KSPNSSN S+               KDQIRT
Subjt:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT

Query:  FQPQQNRPIKKQRLPEF------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
        F P Q RPIKKQR PE       P P P RR+PIAVE+ LRRTRSE+I  RS  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  FQPQQNRPIKKQRLPEF------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

XP_023002810.1 uncharacterized protein LOC111496564 [Cucurbita maxima]2.6e-5065.14Show/hide
Query:  MTQNNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRTF
        MT    AA S S  ECCMCGDFG S +LF CK+CQFRSQH+YCSNLYPKADC RICNWCL  +EESK KSPNSSN S+               KDQIRTF
Subjt:  MTQNNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRTF

Query:  QPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
         P Q RPIKKQR PE        P P P RR+PIAVEE LRRTRSE+I  RS  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  QPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

XP_023537720.1 uncharacterized protein LOC111798664 [Cucurbita pepo subsp. pepo]1.1e-4864.77Show/hide
Query:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT
        MT    A A S S  ECCMCGDFG S +LF CK+CQFRSQH+YCSNLYPKADC RICNWCL  +EESK KSPNSSN S+               KDQIRT
Subjt:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT

Query:  FQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
        F P Q RPIKKQR PE        P P P RR+PIAVEE LRRTRSE+I  RS  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  FQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

XP_038884359.1 uncharacterized protein LOC120075221 [Benincasa hispida]3.9e-4665.61Show/hide
Query:  NNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNIS---TCKDQIRTFQPQQNRPIKKQRLP
        NNG   SKS  ECCMCGDFG S++LFHCK+CQFRSQH+YCSNLYPKADC RICNWCL  +EES PKSPNSS+ +       QI TFQ Q N+ IKKQ  P
Subjt:  NNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNIS---TCKDQIRTFQPQQNRPIKKQRLP

Query:  EF---PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
        E    P P P RRRP+ +++KLRRTRSE+I  R+  ++ V+FRNKVRRYKLLDEVSS
Subjt:  EF---PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

TrEMBL top hitse value%identityAlignment
A0A0A0LLR8 Uncharacterized protein4.2e-4667.11Show/hide
Query:  SKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPN-SSNISTCKDQIRTFQPQQNRPIKKQR------LPEF
        SKS  ECCMCGDFG S +LFHCK+CQFRSQH+YCSNLYPKADC RICNWCL L +ES PKSPN SS+I    DQ   F+ Q N+PIKKQ       LP  
Subjt:  SKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPN-SSNISTCKDQIRTFQPQQNRPIKKQR------LPEF

Query:  PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
        P P P RRR I+V+EKLRRTRSE+I  R+  ++ V+FRNKVRRYKLLDEVSS
Subjt:  PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

A0A1S3BCA2 uncharacterized protein LOC1034881031.9e-4363.64Show/hide
Query:  SKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSN--ISTCKDQIRTFQPQQNRPIKKQRL-------P
        SKS  ECC CGDFGLS +LFHCK+CQFRSQH+YCSNLYPKADC RICNWCL   +ES PKSPNSS+  I    DQ   F+ + N+PIKKQ         P
Subjt:  SKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSN--ISTCKDQIRTFQPQQNRPIKKQRL-------P

Query:  EFPAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
          P P P RRR I+V++KLRRTRSE+I  R+  ++ V+FRNKVRRYKLLDEVSS
Subjt:  EFPAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

A0A6J1BR47 uncharacterized protein LOC1110050071.2e-4860.33Show/hide
Query:  NNGAACSKSH----VECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------------
        +NGAA +KS     +ECCMCGDFG S++LF CK+CQ+RSQH+YCSNLYPKA+C RICNWCL+ +EESK KSPNSSN ST                     
Subjt:  NNGAACSKSH----VECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------------

Query:  --KDQIRTFQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
          KDQIRTFQ Q+NRPIKKQR PE        P P  ARRRP+AV++ LRRTRSE+I  R+  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  --KDQIRTFQPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

A0A6J1GHL7 uncharacterized protein LOC1114540135.3e-4964.57Show/hide
Query:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT
        MT    A A S S  ECCMCGDFG S +LF CK+CQFRSQH+YCSNLYPKADC RICNWCL  +EESK KSPNSSN S+               KDQIRT
Subjt:  MTQNNGA-ACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRT

Query:  FQPQQNRPIKKQRLPEF------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
        F P Q RPIKKQR PE       P P P RR+PIAVE+ LRRTRSE+I  RS  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  FQPQQNRPIKKQRLPEF------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

A0A6J1KQ08 uncharacterized protein LOC1114965641.3e-5065.14Show/hide
Query:  MTQNNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRTF
        MT    AA S S  ECCMCGDFG S +LF CK+CQFRSQH+YCSNLYPKADC RICNWCL  +EESK KSPNSSN S+               KDQIRTF
Subjt:  MTQNNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTC--------------KDQIRTF

Query:  QPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS
         P Q RPIKKQR PE        P P P RR+PIAVEE LRRTRSE+I  RS  Q+ V+FRNKVRRYKLLDEVSS
Subjt:  QPQQNRPIKKQRLPEF-------PAPTPARRRPIAVEEKLRRTRSEDILQRS--QKKVVFRNKVRRYKLLDEVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein4.0e-0955.56Show/hide
Query:  CCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPK-ADCNRICNWC
        CCMCGD G S +LF C  C+ R QH YCSN Y + A+   IC+WC
Subjt:  CCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPK-ADCNRICNWC

AT3G60520.1 unknown protein1.4e-0933.63Show/hide
Query:  CCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLY-PKADCNRICNWCLNLQEESKPKSPNSSNISTCKDQIRTFQPQQNRPIKKQRLPE-------------
        CCMCGD G   +LFHC  C  R QH YCS+ Y  +AD  +IC+WC   + +S+  + +  N  + K   R+     +  IK+Q + +             
Subjt:  CCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLY-PKADCNRICNWCLNLQEESKPKSPNSSNISTCKDQIRTFQPQQNRPIKKQRLPE-------------

Query:  ---FPAPTPARRR
            P+P PA RR
Subjt:  ---FPAPTPARRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCAAAATAATGGAGCCGCTTGTTCTAAATCCCATGTGGAGTGCTGCATGTGTGGAGATTTCGGCCTTTCTCACCAGCTTTTTCACTGCAAAGTCTGCCAATTCAG
ATCCCAACACAAGTATTGCAGCAATTTGTACCCAAAAGCTGATTGTAACCGAATCTGCAATTGGTGCCTAAATCTACAAGAAGAATCAAAACCCAAATCCCCAAATTCTT
CCAATATCTCAACTTGCAAGGATCAAATCCGCACTTTTCAGCCCCAGCAAAACAGACCCATAAAAAAACAGAGGCTGCCGGAATTTCCTGCTCCGACGCCGGCGCGGCGG
CGGCCCATCGCCGTCGAGGAGAAACTCCGGCGGACAAGATCGGAGGATATTTTGCAGCGGAGCCAGAAGAAGGTGGTTTTTAGGAACAAAGTTCGAAGGTACAAACTTTT
GGACGAGGTTTCGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATCATCATCACAATTTCACAATTTCACAATTTTCTCTCTCTTAATATATATATTTTTTTTGGGTGTAAATTCATCTCTCTAAATGACCCAAAATAATGGAGCCGCTTGTT
CTAAATCCCATGTGGAGTGCTGCATGTGTGGAGATTTCGGCCTTTCTCACCAGCTTTTTCACTGCAAAGTCTGCCAATTCAGATCCCAACACAAGTATTGCAGCAATTTG
TACCCAAAAGCTGATTGTAACCGAATCTGCAATTGGTGCCTAAATCTACAAGAAGAATCAAAACCCAAATCCCCAAATTCTTCCAATATCTCAACTTGCAAGGATCAAAT
CCGCACTTTTCAGCCCCAGCAAAACAGACCCATAAAAAAACAGAGGCTGCCGGAATTTCCTGCTCCGACGCCGGCGCGGCGGCGGCCCATCGCCGTCGAGGAGAAACTCC
GGCGGACAAGATCGGAGGATATTTTGCAGCGGAGCCAGAAGAAGGTGGTTTTTAGGAACAAAGTTCGAAGGTACAAACTTTTGGACGAGGTTTCGAGCTGAAATTCCCCA
AAATTTATGTTGTTACATAAAATTAAATCCCATTTTATGTCTAATTGTATATGGGGTTTATTTTGGGATTTTACCAAAAAAATTGAAGAGCAAATTATTGAGAGAGAACA
GAGACGTG
Protein sequenceShow/hide protein sequence
MTQNNGAACSKSHVECCMCGDFGLSHQLFHCKVCQFRSQHKYCSNLYPKADCNRICNWCLNLQEESKPKSPNSSNISTCKDQIRTFQPQQNRPIKKQRLPEFPAPTPARR
RPIAVEEKLRRTRSEDILQRSQKKVVFRNKVRRYKLLDEVSS