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Sed0009755 (gene) of Chayote v1 genome

Gene IDSed0009755
OrganismSechium edule (Chayote v1)
Description4F5 domain-containing protein
Genome locationLG04:35031643..35035439
RNA-Seq ExpressionSed0009755
SyntenySed0009755
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4261466.1 unnamed protein product, partial [Prunus armeniaca]1.3e-1284.48Show/hide
Query:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

CAB4292000.1 unnamed protein product [Prunus armeniaca]1.3e-1284.48Show/hide
Query:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

KAE9592102.1 hypothetical protein Lalb_Chr19g0125681 [Lupinus albus]9.4e-1177.97Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK
        +REKDRERAQAR+ KGK KDDGLTPEQRRERDAKALQEK AKKAA   GG N+S G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK

KAF1884038.1 hypothetical protein Lal_00012998 [Lupinus albus]9.4e-1177.97Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK
        +REKDRERAQAR+ KGK KDDGLTPEQRRERDAKALQEK AKKAA   GG N+S G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK

XP_007223554.1 small EDRK-rich factor 2 [Prunus persica]1.7e-1283.05Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        +REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

TrEMBL top hitse value%identityAlignment
A0A6A4NRM2 4F5 domain-containing protein4.5e-1177.97Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK
        +REKDRERAQAR+ KGK KDDGLTPEQRRERDAKALQEK AKKAA   GG N+S G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK

A0A6A5NHN4 4F5 domain-containing protein4.5e-1177.97Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK
        +REKDRERAQAR+ KGK KDDGLTPEQRRERDAKALQEK AKKAA   GG N+S G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAA---GGDNSSAGVTK

A0A6J5TC63 4F5 domain-containing protein (Fragment)6.3e-1384.48Show/hide
Query:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

A0A6J5VRQ2 4F5 domain-containing protein6.3e-1384.48Show/hide
Query:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  REKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

M5XT50 4F5 domain-containing protein8.3e-1383.05Show/hide
Query:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK
        +REKDRERAQAR GKGK+KDDGLTPEQRRERDAKALQEKQAKKAAG   G NSS G +K
Subjt:  RREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAG---GDNSSAGVTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF2.0e-1184.78Show/hide
Query:  RREKDRERAQARS-GKGKSKDDGLTPEQRRERDAKALQEKQAKKAA
        +RE+DRERA AR+ GKGK+KDDGLTPEQRRERDAKALQEK AKKAA
Subjt:  RREKDRERAQARS-GKGKSKDDGLTPEQRRERDAKALQEKQAKKAA

AT4G13615.1 Uncharacterised protein family SERF1.0e-1072.22Show/hide
Query:  RREKDRERAQARS-GKGKSKDDGLTPEQRRERDAKALQEKQAKKAAGGDNSSAG
        +RE+DRERA AR+ GKGK+ DDGLTPEQRRERD KALQEK AKKAA    +S+G
Subjt:  RREKDRERAQARS-GKGKSKDDGLTPEQRRERDAKALQEKQAKKAAGGDNSSAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAACAGAATAGGATGCAGATACGAAGGGAGAAGGATCGAGAGAGGGCTCAGGCTCGGAGCGGCAAGGGCAAATCCAAGGACGATGGTTTGACCCCCGAGCAGCG
CCGTGAGAGGGATGCCAAGGCGCTACAGGAGAAGCAGGCCAAGAAGGCGGCTGGGGGAGATAATTCGTCTGCAGGTGTTACAAAGCATGTTCAATCAGAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGAACAGAATAGGATGCAGATACGAAGGGAGAAGGATCGAGAGAGGGCTCAGGCTCGGAGCGGCAAGGGCAAATCCAAGGACGATGGTTTGACCCCCGAGCAGCG
CCGTGAGAGGGATGCCAAGGCGCTACAGGAGAAGCAGGCCAAGAAGGCGGCTGGGGGAGATAATTCGTCTGCAGGTGTTACAAAGCATGTTCAATCAGAAGTTTGAGACT
TCGGGTGAGCTTAAAAATCAAAGCCTTTGATGCCTCTCGAAGCGAGCAAAGGTCCTCGGGGTGTTTAGGGGAGTAAAGTTCTGACTTCGTATCTCCAAAAATACCACATC
TAATCAAATGTTTAATTTCAACTTCCTCTTTAATTATGAGTATTTCTGAATTAGTGAATTTGGTTCTCTATTATTACTCTACTTGGGATTAGGGGCTAATTTAGTTCAAG
ATCTTGAATTCAAGCCTCAAGGTACGATGCTTTTAAGTGGAGGGCTTGATGCCATAGATTAAAAAAAAACTTTATATATATAAATAAAATGGCTTACTCCCTATTTAA
Protein sequenceShow/hide protein sequence
MIEQNRMQIRREKDRERAQARSGKGKSKDDGLTPEQRRERDAKALQEKQAKKAAGGDNSSAGVTKHVQSEV