; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009789 (gene) of Chayote v1 genome

Gene IDSed0009789
OrganismSechium edule (Chayote v1)
Descriptionarabinogalactan peptide 22-like
Genome locationLG07:12468998..12470892
RNA-Seq ExpressionSed0009789
SyntenySed0009789
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2384.51Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVAQPQSLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSN+F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]1.3e-2078.87Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVA P SL  AP P+SDGTSIDQGIAY+LM+VALALTYLIHNADLSN+F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]8.2e-2384.51Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVAQPQSLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSN+F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

XP_022985432.1 arabinogalactan peptide 20 [Cucurbita maxima]3.1e-2283.1Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVAQPQSLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLS++F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]4.8e-2384.51Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+ST SFGF+AA AL+FA+FLPVAQP SLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSNTF
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

TrEMBL top hitse value%identityAlignment
A0A1S3BS55 arabinogalactan peptide 22-like9.1e-2079.71Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSN
        MA+S  SF  +AATAL+FA+FLPVA P SLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSN
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSN

A0A5D3CYF3 Arabinogalactan peptide 22-like9.1e-2079.71Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSN
        MA+S  SF  +AATAL+FA+FLPVA P SLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSN
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSN

A0A6J1C4C2 arabinogalactan peptide 22-like6.3e-2178.87Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVA P SL  AP P+SDGTSIDQGIAY+LM+VALALTYLIHNADLSN+F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

A0A6J1ETC6 arabinogalactan peptide 22-like4.0e-2384.51Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVAQPQSLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLSN+F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

A0A6J1J4V7 arabinogalactan peptide 201.5e-2283.1Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA+S  SFGFVAA AL+FA+FLPVAQPQSLA AP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLS++F
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 164.7e-1361.97Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA      GF A  + +FAV L +A  QSLA AP PTSDGTSIDQGIAY+LMVVAL LTYLIH  D S+++
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

Q8L9T8 Arabinogalactan protein 411.8e-1260.32Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH
        M+ S   FG     +++FA+ LP+A  QS A AP PTSDGT+IDQGIAY+LM+VAL LTYLIH
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH

Q9FK16 Arabinogalactan protein 221.3e-1062.26Show/hide
Query:  VAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH
        +A   ++  + LP+AQ  S + AP PTSDGTSIDQGIAY+LM+VALALTY IH
Subjt:  VAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH

Q9M373 Arabinogalactan protein 205.5e-1464.18Show/hide
Query:  STKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNT
        S  S   +A  A +FAV  P A  QSLA AP PTSDGTSIDQGIAY+LMVVAL LTYLIH  D S++
Subjt:  STKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNT

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 163.3e-1461.97Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF
        MA      GF A  + +FAV L +A  QSLA AP PTSDGTSIDQGIAY+LMVVAL LTYLIH  D S+++
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF

AT3G61640.1 arabinogalactan protein 203.9e-1564.18Show/hide
Query:  STKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNT
        S  S   +A  A +FAV  P A  QSLA AP PTSDGTSIDQGIAY+LMVVAL LTYLIH  D S++
Subjt:  STKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNT

AT5G24105.1 arabinogalactan protein 411.3e-1360.32Show/hide
Query:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH
        M+ S   FG     +++FA+ LP+A  QS A AP PTSDGT+IDQGIAY+LM+VAL LTYLIH
Subjt:  MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH

AT5G53250.1 arabinogalactan protein 229.0e-1262.26Show/hide
Query:  VAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH
        +A   ++  + LP+AQ  S + AP PTSDGTSIDQGIAY+LM+VALALTY IH
Subjt:  VAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGTCTACAAAATCCTTCGGTTTCGTGGCCGCCACGGCGCTCCTCTTCGCCGTTTTCTTGCCGGTTGCTCAGCCGCAGTCCTTGGCTTCGGCTCCCCCTCCCAC
CAGCGACGGGACATCCATAGACCAAGGGATAGCTTATATCTTAATGGTGGTAGCATTGGCACTCACTTATCTCATCCACAATGCTGACTTATCCAACACCTTCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGGTTGTCCCATCCGCCCATCGCGAGACTGCCTCTGTTACCGTTCAGAGATTTCGTCCTTCGAGAAGGGAAAGGGAAAGAGAGATTCCTTTCTCTCTCTCTGCGAAG
CTCTTTGAATCCATTGAAGAAGAAGAAGAAGCCATTGATGAACTGAAAGCTTCTTGATCTGAGACACGCCTCGCAGAGAGAGATCCACCCTCCTCTTCTACATTTCTTTC
GATCCGTTTCGCTCAGATCAGAAATCACAGCACCATTCGGTCTCCAATGGCGCTGTCTACAAAATCCTTCGGTTTCGTGGCCGCCACGGCGCTCCTCTTCGCCGTTTTCT
TGCCGGTTGCTCAGCCGCAGTCCTTGGCTTCGGCTCCCCCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATATCTTAATGGTGGTAGCATTGGCACTC
ACTTATCTCATCCACAATGCTGACTTATCCAACACCTTCTGAAAAATAAGCATTTGGAGAACCAATCTCTTTTGATTATTATTGATCAAATGTGTAGGGATTTTAGTTAG
AAATGCAAATGGGTTTTGAAGGAATTGGTTTCTTTTGCATCTCTATGGTTTTTCCTAGTTGTAGTTTCTGGTTTGATATTATTTATGATGATTGTTGGTGCTCTCTTGCA
TTTCTATGTACAGTATCTTGATTTTGAATGAGATTTATTGGTTTGGTGGTTA
Protein sequenceShow/hide protein sequence
MALSTKSFGFVAATALLFAVFLPVAQPQSLASAPPPTSDGTSIDQGIAYILMVVALALTYLIHNADLSNTF