; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009794 (gene) of Chayote v1 genome

Gene IDSed0009794
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent Clp protease adapter protein ClpS
Genome locationLG06:43078719..43082326
RNA-Seq ExpressionSed0009794
SyntenySed0009794
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446565.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo]5.1e-7086.79Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG  F    SVVKSA TAG GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

XP_011655763.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]3.3e-6986.79Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG  F    SVVKSA TAG GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAE HCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

XP_022150471.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica charantia]3.7e-6884.28Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKFS----VVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN +PGD++ +C+G   S    +VKSATTAG GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKFS----VVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

XP_022968529.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]1.4e-6786.25Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG----QKFSVVKSATTAGI-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV
        MEIAI GKL  SPNHVFN KPGDRSS+CKG       SVVKSATTAG  GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG----QKFSVVKSATTAGI-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        LMKVIP +T+D AVNIMQEAH NGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]8.2e-6886.16Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG--QKF--SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG    F  SVVKSA TAG GGGLLERPVIEKATPGRESEFDLR+SRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG--QKF--SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAH NGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

TrEMBL top hitse value%identityAlignment
A0A0A0KWD9 ClpS domain-containing protein1.6e-6986.79Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG  F    SVVKSA TAG GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAE HCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X12.5e-7086.79Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG  F    SVVKSA TAG GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS12.5e-7086.79Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN KPGDRSS+CKG  F    SVVKSA TAG GGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKF----SVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.8e-6884.28Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKFS----VVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKL  SPNHVFN +PGD++ +C+G   S    +VKSATTAG GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKFS----VVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        MKVIP +T+D AVNIMQEAHYNGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  MKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

A0A6J1HZX0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like6.7e-6886.25Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG----QKFSVVKSATTAGI-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV
        MEIAI GKL  SPNHVFN KPGDRSS+CKG       SVVKSATTAG  GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKG----QKFSVVKSATTAGI-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC
        LMKVIP +T+D AVNIMQEAH NGLSLVIICAQADAEEHCM+LRGNGLLSSIEP SGGCC
Subjt:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.1e-2250.46Show/hide
Query:  GGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLS
        GG+++ P     T  ++    + RS+K  P Y+V+LHND++NKREYVV+VL+KV+ ++TVD AV  MQEAH  G++LV+ C Q +AE +C  LR NGL S
Subjt:  GGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLS

Query:  SIEPTSGGC
        +IEP  GGC
Subjt:  SIEPTSGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS1.2e-1859.49Show/hide
Query:  RKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEP
        RK  P YRV+LHNDDFN  EYVV VLM+ +P LT   AV+IM EAH NG  LVI C    AE +C +L+ +GL SSIEP
Subjt:  RKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS1.1e-1444.68Show/hide
Query:  TPGRESEFDL--RRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P+L+   A+ +M EAH  G+ LVI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFDL--RRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS5.8e-1657.53Show/hide
Query:  RKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGL
        RK  P YRV+LHNDDFN  EYVV VLM+ +P LT   AV+IM EAH NG  LVI C    AE +C +L+ +GL
Subjt:  RKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.2e-5566.67Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV
        ME AI G+L  +P+ +FNSK GD+  + KG     S++ + +T+   G GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FNKREYVVQV
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC
        LMKVIP +TVD AVNIMQEAH NGL++VI+CAQADAE+HCM+LRGNGLLSS+EP  GGC
Subjt:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.5e-5666.67Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV
        ME AI G+L  +P+ +FNSK GD+  + KG     S++ + +T+   G GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FNKREYVVQV
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC
        LMKVIP +TVD AVNIMQEAH NGL++VI+CAQADAE+HCM+LRGNGLLSS+EP  GGC
Subjt:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein7.2e-3852.2Show/hide
Query:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV
        ME AI G+L  +P+ +FNSK GD+  + KG     S++ + +T+   G GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FNKREYVVQV
Subjt:  MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQ--KFSVVKSATTA---GIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC
        LMK                              ADAE+HCM+LRGNGLLSS+EP  GGC
Subjt:  LMKVIPKLTVDTAVNIMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGATTTATGGAAAATTAGTTCCCTCACCCAACCATGTATTCAACTCCAAACCAGGGGACAGAAGTTCTCTGTGTAAAGGACAGAAGTTCTCGGTTGTTAA
ATCAGCCACAACAGCAGGAATAGGAGGAGGGTTGTTGGAGAGGCCTGTTATTGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAACGA
CGCCACCATATCGTGTCATTCTGCATAATGACGACTTCAATAAACGGGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCCAAATTGACGGTCGACACTGCAGTTAAC
ATCATGCAAGAAGCTCACTACAATGGCTTGTCCCTGGTGATCATTTGTGCTCAGGCCGATGCTGAAGAACACTGCATGAAGCTTAGAGGCAATGGGCTGTTAAGTTCAAT
TGAGCCTACAAGTGGTGGGTGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
AATCTCTAACAATCAAAAGAAATATTTCGAATCCGAATCGATTTGCTGTTTCTGATTTACGAGAGAAGAATTCATGGAGATTGCGATTTATGGAAAATTAGTTCCCTCAC
CCAACCATGTATTCAACTCCAAACCAGGGGACAGAAGTTCTCTGTGTAAAGGACAGAAGTTCTCGGTTGTTAAATCAGCCACAACAGCAGGAATAGGAGGAGGGTTGTTG
GAGAGGCCTGTTATTGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAACGACGCCACCATATCGTGTCATTCTGCATAATGACGACTT
CAATAAACGGGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCCAAATTGACGGTCGACACTGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCCCTGG
TGATCATTTGTGCTCAGGCCGATGCTGAAGAACACTGCATGAAGCTTAGAGGCAATGGGCTGTTAAGTTCAATTGAGCCTACAAGTGGTGGGTGCTGTTAAGCCTTTTCA
TCATTGGATTATACATTTATATGTATTCAAGCTAGGATGGGACTCAAAAGAAACTGGTATGTAAGTATTGAAAAACTCCTATGATATTTTGCTTGTTTTGGGAGTAGAAA
AACTCTCTTTTGCTCATCTTCTTTGATTATTTTAATTGTGTTTGGAGATTTGTATAGGAAAAAACTATCCACATTGATTGACGTGATGAACTATTAACAGAGAAAATTAT
GTTAATG
Protein sequenceShow/hide protein sequence
MEIAIYGKLVPSPNHVFNSKPGDRSSLCKGQKFSVVKSATTAGIGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPKLTVDTAVN
IMQEAHYNGLSLVIICAQADAEEHCMKLRGNGLLSSIEPTSGGCC