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Sed0009826 (gene) of Chayote v1 genome

Gene IDSed0009826
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:22484059..22487604
RNA-Seq ExpressionSed0009826
SyntenySed0009826
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594650.1 hypothetical protein SDJN03_11203, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3851.92Show/hide
Query:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V
        MESAD+ KSV                   ++ +++T P DSFIID+D+FS+S+T EIS +S+IS NFS KGTL   NKIG+DH A DDT E +SPI   V
Subjt:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V

Query:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV
        LGA S LEK+ VVMG GS EE  G                  G  G  R SFRR+S KRSSQACSW+L+PRKIF+ CAT+SC+GTMVLIY AFSSG +N 
Subjt:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV

Query:  ADEISHLD
         +    LD
Subjt:  ADEISHLD

XP_022926748.1 uncharacterized protein LOC111433776 isoform X1 [Cucurbita moschata]2.7e-3851.92Show/hide
Query:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V
        MESAD+ KSV                   ++ +++T P DSFIID+D+FS+S+T EIS +S+IS NFS KGTL   NKIG+DH A DDT E +SPI   V
Subjt:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V

Query:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV
        LGA S LEK+ VVMG GS EE  G                  G  G  R SFRR+S KRSSQACSW+L+PRKIF+ CAT+SC+GTMVLIY AFSSG +N 
Subjt:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV

Query:  ADEISHLD
         +    LD
Subjt:  ADEISHLD

XP_022926750.1 uncharacterized protein LOC111433776 isoform X2 [Cucurbita moschata]7.5e-4156.48Show/hide
Query:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V
        MESAD+ KSV                   ++ +++T P DSFIID+D+FS+S+T EIS +S+IS NFS KGTL   NKIG+DH A DDT E +SPI   V
Subjt:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V

Query:  LGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVADEISHLD
        LGA S LEK+ VVMG GS EE  G   G GG  R SFRR+S KRSSQACSW+L+PRKIF+ CAT+SC+GTMVLIY AFSSG +N  +    LD
Subjt:  LGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVADEISHLD

XP_023002952.1 uncharacterized protein LOC111496704 isoform X1 [Cucurbita maxima]1.7e-4053.62Show/hide
Query:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF
        SSMESAD+ KSV                         + F+++T P DSFIID+D+FSNS+T EIS +S++S NFS KGTL   NKIG+DH A +DT E 
Subjt:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF

Query:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDGGR------------------GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLA
        +SPI   VLGA S LEK+ VVMG GS EE  GG                   GG  RPSFRR S KRSSQACSW+L+PRKIF+FCAT+SC+GTMVLIY A
Subjt:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDGGR------------------GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLA

Query:  FSSGKMN
        FSSG +N
Subjt:  FSSGKMN

XP_023002953.1 uncharacterized protein LOC111496704 isoform X2 [Cucurbita maxima]2.3e-4257.81Show/hide
Query:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF
        SSMESAD+ KSV                         + F+++T P DSFIID+D+FSNS+T EIS +S++S NFS KGTL   NKIG+DH A +DT E 
Subjt:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF

Query:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMN
        +SPI   VLGA S LEK+ VVMG GS EE  G   G GG  RPSFRR S KRSSQACSW+L+PRKIF+FCAT+SC+GTMVLIY AFSSG +N
Subjt:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMN

TrEMBL top hitse value%identityAlignment
A0A6J1CJV0 uncharacterized protein LOC111012281 isoform X22.4e-3254.19Show/hide
Query:  EIYVIYSSMESAD--HSKSVSNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGD---DTGEFISPIVLGAV---SK
        E+Y +  SM+S     S   + F+  T P +SF+ID+D FSN ++ EIS NS I+ NFS KG L   NKI +DH A D    T E ISP+V GAV   + 
Subjt:  EIYVIYSSMESAD--HSKSVSNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGD---DTGEFISPIVLGAV---SK

Query:  LEKKPVVMGFGSGEEHDGGR-GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD
        LEK+ V  G GS EE  GG  GG  R SFRRNS KRS Q C+W+L+PRKIFL CAT+SCVGTM+LIYLAFSSG ++V +
Subjt:  LEKKPVVMGFGSGEEHDGGR-GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD

A0A6J1EJ33 uncharacterized protein LOC111433776 isoform X11.3e-3851.92Show/hide
Query:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V
        MESAD+ KSV                   ++ +++T P DSFIID+D+FS+S+T EIS +S+IS NFS KGTL   NKIG+DH A DDT E +SPI   V
Subjt:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V

Query:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV
        LGA S LEK+ VVMG GS EE  G                  G  G  R SFRR+S KRSSQACSW+L+PRKIF+ CAT+SC+GTMVLIY AFSSG +N 
Subjt:  LGAVSKLEKKPVVMGFGSGEEHDG------------------GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNV

Query:  ADEISHLD
         +    LD
Subjt:  ADEISHLD

A0A6J1EM04 uncharacterized protein LOC111433776 isoform X23.6e-4156.48Show/hide
Query:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V
        MESAD+ KSV                   ++ +++T P DSFIID+D+FS+S+T EIS +S+IS NFS KGTL   NKIG+DH A DDT E +SPI   V
Subjt:  MESADHSKSV-------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEFISPI---V

Query:  LGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVADEISHLD
        LGA S LEK+ VVMG GS EE  G   G GG  R SFRR+S KRSSQACSW+L+PRKIF+ CAT+SC+GTMVLIY AFSSG +N  +    LD
Subjt:  LGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVADEISHLD

A0A6J1KL18 uncharacterized protein LOC111496704 isoform X18.1e-4153.62Show/hide
Query:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF
        SSMESAD+ KSV                         + F+++T P DSFIID+D+FSNS+T EIS +S++S NFS KGTL   NKIG+DH A +DT E 
Subjt:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF

Query:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDGGR------------------GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLA
        +SPI   VLGA S LEK+ VVMG GS EE  GG                   GG  RPSFRR S KRSSQACSW+L+PRKIF+FCAT+SC+GTMVLIY A
Subjt:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDGGR------------------GGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLA

Query:  FSSGKMN
        FSSG +N
Subjt:  FSSGKMN

A0A6J1KV36 uncharacterized protein LOC111496704 isoform X21.1e-4257.81Show/hide
Query:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF
        SSMESAD+ KSV                         + F+++T P DSFIID+D+FSNS+T EIS +S++S NFS KGTL   NKIG+DH A +DT E 
Subjt:  SSMESADHSKSV-------------------------SNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTL---NKIGEDHDAGDDTGEF

Query:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMN
        +SPI   VLGA S LEK+ VVMG GS EE  G   G GG  RPSFRR S KRSSQACSW+L+PRKIF+FCAT+SC+GTMVLIY AFSSG +N
Subjt:  ISPI---VLGAVSKLEKKPVVMGFGSGEEHDG---GRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21215.1 unknown protein6.0e-0446Show/hide
Query:  RRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD
        R++S KRS    SW L+P+KI LF AT+S +G+++LI    S  K N  D
Subjt:  RRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD

AT4G21215.2 unknown protein6.0e-0446Show/hide
Query:  RRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD
        R++S KRS    SW L+P+KI LF AT+S +G+++LI    S  K N  D
Subjt:  RRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATATAGAAATATATGTCATTTATTCTTCAATGGAATCGGCGGATCATTCAAAGTCGGTTTCTAATTTCCGGTTTTCAACTGTTCCATTGGATAGCTTCATCAT
CGATGTGGACAATTTTTCAAATAGTAGCACTGACGAAATTTCTCACAATTCAACAATTTCAATGAACTTTAGCGGAAAAGGTACTTTGAACAAAATTGGGGAAGATCATG
ATGCTGGTGATGACACAGGAGAGTTCATCTCCCCAATAGTACTAGGAGCGGTTAGTAAGCTCGAAAAGAAGCCTGTGGTGATGGGGTTCGGGTCCGGCGAAGAACACGAT
GGCGGCCGGGGCGGCATGGTAAGGCCTAGCTTTAGAAGAAACAGTTTGAAGCGATCTTCACAAGCTTGCAGCTGGTTCTTGAACCCCAGGAAGATATTTTTGTTCTGCGC
CACAGTGTCGTGCGTGGGGACTATGGTGCTGATATACTTGGCATTTTCATCTGGAAAGATGAATGTAGCAGACGAAATTAGCCACTTAGATTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATATAGAAATATATGTCATTTATTCTTCAATGGAATCGGCGGATCATTCAAAGTCGGTTTCTAATTTCCGGTTTTCAACTGTTCCATTGGATAGCTTCATCAT
CGATGTGGACAATTTTTCAAATAGTAGCACTGACGAAATTTCTCACAATTCAACAATTTCAATGAACTTTAGCGGAAAAGGTACTTTGAACAAAATTGGGGAAGATCATG
ATGCTGGTGATGACACAGGAGAGTTCATCTCCCCAATAGTACTAGGAGCGGTTAGTAAGCTCGAAAAGAAGCCTGTGGTGATGGGGTTCGGGTCCGGCGAAGAACACGAT
GGCGGCCGGGGCGGCATGGTAAGGCCTAGCTTTAGAAGAAACAGTTTGAAGCGATCTTCACAAGCTTGCAGCTGGTTCTTGAACCCCAGGAAGATATTTTTGTTCTGCGC
CACAGTGTCGTGCGTGGGGACTATGGTGCTGATATACTTGGCATTTTCATCTGGAAAGATGAATGTAGCAGACGAAATTAGCCACTTAGATTCATAG
Protein sequenceShow/hide protein sequence
MENIEIYVIYSSMESADHSKSVSNFRFSTVPLDSFIIDVDNFSNSSTDEISHNSTISMNFSGKGTLNKIGEDHDAGDDTGEFISPIVLGAVSKLEKKPVVMGFGSGEEHD
GGRGGMVRPSFRRNSLKRSSQACSWFLNPRKIFLFCATVSCVGTMVLIYLAFSSGKMNVADEISHLDS