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Sed0009830 (gene) of Chayote v1 genome

Gene IDSed0009830
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin related modifier 1
Genome locationLG09:704322..707112
RNA-Seq ExpressionSed0009830
SyntenySed0009830
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593693.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4692.93Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+ E+GAGKL+MKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

XP_004144991.1 ubiquitin-related modifier 1 homolog 2 [Cucumis sativus]1.5e-4693.94Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSID E+G GK IMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

XP_008460154.1 PREDICTED: ubiquitin-related modifier 1 homolog 2 [Cucumis melo]1.1e-4693.94Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSID E+G GKLIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

XP_022145476.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Momordica charantia]1.9e-4693.94Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        M LTLEFGGGLELLCNSVKIHNVSID E+GAGKLIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

XP_023514461.1 ubiquitin-related modifier 1 homolog 2 [Cucurbita pepo subsp. pepo]2.5e-4692.93Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+ E+GAGKL+MKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

TrEMBL top hitse value%identityAlignment
A0A1S3CCC7 Ubiquitin-related modifier 1 homolog5.5e-4793.94Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSID E+G GKLIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

A0A6J1CWE9 Ubiquitin-related modifier 1 homolog9.3e-4793.94Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        M LTLEFGGGLELLCNSVKIHNVSID E+GAGKLIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

A0A6J1HIP6 Ubiquitin-related modifier 1 homolog7.9e-4690.91Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHN+SI+ E+GAGKL+MKDLLSWVRSNLIKERPEMFMKG+TVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

A0A6J1KGQ8 Ubiquitin-related modifier 1 homolog4.6e-4691.92Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+ E+G GKL+MKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

A0A6J1KZL7 Ubiquitin-related modifier 1 homolog1.0e-4591.92Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQLTLEFGGGLELLC+SVKIH+VS+D E+GAG LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 12.3e-4281.19Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGK--LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG
        MQLTLEFGGGLELLC+S KIH V++DL +GA      MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDV+VFISTLHG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGK--LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG

Query:  G
        G
Subjt:  G

B3H7G2 Ubiquitin-related modifier 1 homolog 21.6e-4384.85Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQ TLEFGGGLELLC+SVKIH V+I+L + +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDVIVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

B6SXH2 Ubiquitin-related modifier 1 homolog9.3e-3672.28Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSIDL-ESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG
        M LTLEFGGGLELL  NS K+H V +   + G GK+ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDV+VFISTLHG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSIDL-ESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG

Query:  G
        G
Subjt:  G

Q0D6M1 Ubiquitin-related modifier 1 homolog1.7e-3773Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        M LTLEFGGGLELL   S K+H V +    G GK++MK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog1.7e-3773Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        M LTLEFGGGLELL   S K+H V +    G GK++MK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 11.6e-4381.19Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGK--LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG
        MQLTLEFGGGLELLC+S KIH V++DL +GA      MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDV+VFISTLHG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGK--LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHG

Query:  G
        G
Subjt:  G

AT3G61113.1 Ubiquitin related modifier 11.1e-4484.85Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG
        MQ TLEFGGGLELLC+SVKIH V+I+L + +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDVIVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTAACCCTTGAATTTGGTGGGGGATTGGAGTTACTATGTAACTCTGTGAAGATTCATAATGTCAGCATTGATCTAGAAAGTGGAGCTGGAAAGTTAATCATGAA
AGATTTGCTCTCTTGGGTACGTAGTAATTTGATCAAGGAGAGGCCAGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATT
GGGAGCTCAGTGGGCAGCTTGACACAGCATTGGAAGAGAAAGATGTGATAGTGTTCATATCCACCTTGCATGGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTAACCTAAAGATCTGATCTTTGTCTTCCCCACAGGGTTTTAGGGTTTCTGCGGAAGGAAATTGAAAAATGCAACTAACCCTTGAATTTGGTGGGGGATTGGAGTTA
CTATGTAACTCTGTGAAGATTCATAATGTCAGCATTGATCTAGAAAGTGGAGCTGGAAAGTTAATCATGAAAGATTTGCTCTCTTGGGTACGTAGTAATTTGATCAAGGA
GAGGCCAGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTCAGTGGGCAGCTTGACACAGCATTGGAAGAGA
AAGATGTGATAGTGTTCATATCCACCTTGCATGGAGGCTAACCTTGATCAGGAATGTCTTTTTCACTTTGTATTTATAATATGGTTCTTGGGCATTTTAACCTTAAAATA
TCTGTATTTTCCCTGAAATTCGTCTGGCCAATTGATATGGACATTGTTACCTTAAAATATATACATGGTAATCTTTATTAGATTATTGCTCTTTGAGGGTTGTGTAATTT
TTCTAATATTTGTGACTGTCTGATCAAGTTACGCCCATCTTGTTTATTCTTATAAAATATACTGTCGGAGTGTCCGACTCTATAACATTTGAATATTGAGAAAATTCGCA
AGAAATTATTTACTTGATAGATG
Protein sequenceShow/hide protein sequence
MQLTLEFGGGLELLCNSVKIHNVSIDLESGAGKLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTALEEKDVIVFISTLHGG