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Sed0009836 (gene) of Chayote v1 genome

Gene IDSed0009836
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like
Genome locationLG05:40435808..40436188
RNA-Seq ExpressionSed0009836
SyntenySed0009836
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH04787.1 flowering promoting factor 1 [Prunus dulcis]1.6e-5079.67Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE+K+P  PGTATAPGARPRVLVYLP+NQ+IRSY++LEQRL ELGW+RYPN   PDLLQFHRS  S  LISLP +FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDP
         FK +HMYDIVVKNR FFQVRDP
Subjt:  KFKPMHMYDIVVKNRHFFQVRDP

GAV78264.1 hypothetical protein CFOL_v3_21732 [Cephalotus follicularis]2.8e-5078.86Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE+K+P  PGTATAPGARPRVLVYLP+NQ+IRSYA+LEQRL ELGW+RY NP +P+LLQFH+S +S HLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDP
         FK +HMYDIVVKNR  F+VRDP
Subjt:  KFKPMHMYDIVVKNRHFFQVRDP

KAG6570697.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5990.48Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFE KDP  PGTATAPGARPRVLVYLP+NQ+IRSYA+LEQRLGELGWSRY N AEPDLLQFHRSHDS HLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDPPNS
        KFKPMHMYDIVVKNRHFF+VRDP +S
Subjt:  KFKPMHMYDIVVKNRHFFQVRDPPNS

XP_022148408.1 flowering-promoting factor 1-like [Momordica charantia]6.0e-5383.59Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPN-PAEP-DLLQFHRSHDSPHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDP  PGTATAPGARPRVLVYLP+NQ+I SYA+LEQRLGELGW+RY N  AEP +L++FHRSHDS  LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPN-PAEP-DLLQFHRSHDSPHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFQVRDPPNS
        FAKFKPMHMYDIVVKNRHFFQVRDP ++
Subjt:  FAKFKPMHMYDIVVKNRHFFQVRDPPNS

XP_040993050.1 flowering-promoting factor 1-like [Juglans microcarpa x Juglans regia]1.6e-5079.51Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE+K+P  PGTATAPGARPRVLVYLP+N +IRSY++LE RL ELGWSRY NP  PD LQFHRS +SPHLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
         FK  HMYDIVVKNR FF+VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

TrEMBL top hitse value%identityAlignment
A0A0A0KE84 Uncharacterized protein5.5e-6090.48Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFE KDP  PGTATAPGARPRVLVYLP+NQ+IRSYA+LEQRL ELGW+RYPN AEPDLLQFHRSHDS HLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDPPNS
        KFKPMHMYDIVVKNRHFFQVRDP +S
Subjt:  KFKPMHMYDIVVKNRHFFQVRDPPNS

A0A1Q3CDF3 Uncharacterized protein1.4e-5078.86Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE+K+P  PGTATAPGARPRVLVYLP+NQ+IRSYA+LEQRL ELGW+RY NP +P+LLQFH+S +S HLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDP
         FK +HMYDIVVKNR  F+VRDP
Subjt:  KFKPMHMYDIVVKNRHFFQVRDP

A0A1R3HBS3 Uncharacterized protein1.4e-5077.24Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDK GVARLISNPTRESFE+KDP  PGT+TAPGARPRVLVYLP+NQ+IRSY++LEQRLGELGW+RY N ++P+LLQFH+S++S HLISLP++FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDP
         F+ +HMYDIVVKNR FF+VRDP
Subjt:  KFKPMHMYDIVVKNRHFFQVRDP

A0A4Y1RLM7 Flowering promoting factor 18.0e-5179.67Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE+K+P  PGTATAPGARPRVLVYLP+NQ+IRSY++LEQRL ELGW+RYPN   PDLLQFHRS  S  LISLP +FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRDP
         FK +HMYDIVVKNR FFQVRDP
Subjt:  KFKPMHMYDIVVKNRHFFQVRDP

A0A6J1D405 flowering-promoting factor 1-like2.9e-5383.59Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPN-PAEP-DLLQFHRSHDSPHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDP  PGTATAPGARPRVLVYLP+NQ+I SYA+LEQRLGELGW+RY N  AEP +L++FHRSHDS  LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPN-PAEP-DLLQFHRSHDSPHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFQVRDPPNS
        FAKFKPMHMYDIVVKNRHFFQVRDP ++
Subjt:  FAKFKPMHMYDIVVKNRHFFQVRDPPNS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 12.7e-2448.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLP+ +++ SY+ LEQ L  LGW RY    + DLLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

O24340 Flowering-promoting factor 12.1e-2450Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   +              +R +V+VYLP+ ++I SY+ LEQ L  LGW RY    + DLLQFH+   S  LISLPK F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

Q0E1D7 Flowering-promoting factor 1-like protein 32.1e-2450.82Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        M+GVWVF K+G+ R + NP     E    AG G     G R +VLV++PS +++ SY  LE+RL ELGW RY    +P LLQFH+   + HLIS+P+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KFK +HMYDIVVK R+ F+VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 11.2e-2449.19Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPD-LLQFHRSHDSPHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  + +  G       R ++LV+LPS++++ SY  LE+ L  LGW RY +    D LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPD-LLQFHRSHDSPHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFQVRD
        F+KF  +HMYDIVVKN + F VRD
Subjt:  FAKFKPMHMYDIVVKNRHFFQVRD

Q9LXB5 Flowering-promoting factor 1-like protein 22.6e-2248.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLP+ + + SY+ LEQ L  LGW RY +  + DL+Q+H+   S  LISLP+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KF  ++MYDIVVKN + F VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 18.8e-2649.19Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPD-LLQFHRSHDSPHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  + +  G       R ++LV+LPS++++ SY  LE+ L  LGW RY +    D LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPD-LLQFHRSHDSPHLISLPKS

Query:  FAKFKPMHMYDIVVKNRHFFQVRD
        F+KF  +HMYDIVVKN + F VRD
Subjt:  FAKFKPMHMYDIVVKNRHFFQVRD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.8e-2348.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLP+ + + SY+ LEQ L  LGW RY +  + DL+Q+H+   S  LISLP+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KF  ++MYDIVVKN + F VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD

AT5G24860.1 flowering promoting factor 12.0e-2548.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLP+ +++ SY+ LEQ L  LGW RY    + DLLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFA

Query:  KFKPMHMYDIVVKNRHFFQVRD
        KF  ++MYDIVVKN ++F VRD
Subjt:  KFKPMHMYDIVVKNRHFFQVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGTGTGGCTCGTTTAATCTCGAACCCAACCCGGGAGTCGTTCGAGCGGAAGGACCCGGCCGGACCGGGCACCGCCACCGC
ACCGGGGGCTCGACCCAGGGTCCTGGTCTACCTCCCAAGCAACCAAATCATCCGCTCCTACGCCCAACTGGAACAACGGCTCGGCGAACTCGGGTGGAGCCGCTACCCGA
ACCCGGCCGAACCAGACCTCCTCCAATTCCACCGCTCCCACGACTCGCCCCACCTCATTTCCCTCCCCAAATCCTTCGCCAAATTCAAGCCCATGCACATGTACGACATT
GTCGTCAAAAACCGCCATTTCTTCCAAGTTCGAGACCCCCCCAACTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGTGTGGCTCGTTTAATCTCGAACCCAACCCGGGAGTCGTTCGAGCGGAAGGACCCGGCCGGACCGGGCACCGCCACCGC
ACCGGGGGCTCGACCCAGGGTCCTGGTCTACCTCCCAAGCAACCAAATCATCCGCTCCTACGCCCAACTGGAACAACGGCTCGGCGAACTCGGGTGGAGCCGCTACCCGA
ACCCGGCCGAACCAGACCTCCTCCAATTCCACCGCTCCCACGACTCGCCCCACCTCATTTCCCTCCCCAAATCCTTCGCCAAATTCAAGCCCATGCACATGTACGACATT
GTCGTCAAAAACCGCCATTTCTTCCAAGTTCGAGACCCCCCCAACTCTTAA
Protein sequenceShow/hide protein sequence
MSGVWVFDKNGVARLISNPTRESFERKDPAGPGTATAPGARPRVLVYLPSNQIIRSYAQLEQRLGELGWSRYPNPAEPDLLQFHRSHDSPHLISLPKSFAKFKPMHMYDI
VVKNRHFFQVRDPPNS