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Sed0009845 (gene) of Chayote v1 genome

Gene IDSed0009845
OrganismSechium edule (Chayote v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG06:13819477..13820085
RNA-Seq ExpressionSed0009845
SyntenySed0009845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR86313.1 Transposase, Ptta/En/Spm, plant [Cinnamomum micranthum f. kanehirae]3.2e-1137.29Show/hide
Query:  EDWEYLCNYWESPKWLEKSRK------------AKKSRSGLQYHHRT-------VELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTHEGSQPMTQSA
        EDWE  CN + S ++ + S+K               S+S ++Y H T       +ELWH   Y   KGWS P+   L+EKMI LQ  PT + S P+T   
Subjt:  EDWEYLCNYWESPKWLEKSRK------------AKKSRSGLQYHHRT-------VELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTHEGSQPMTQSA

Query:  ICVEVLGHRSDIAKGMGY
        IC +VLG R    +G+G+
Subjt:  ICVEVLGHRSDIAKGMGY

XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]4.5e-1334.56Show/hide
Query:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI
        P   R     R+T  EDW +LC+ WE+P+W E ++K KK+R+ L ++HR                       V+L+ +  Y+   G     A + +E M 
Subjt:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI

Query:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMGY
         L +APT EG +P+TQ   C +VLG R D  KG+GY
Subjt:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMGY

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]1.5e-1133.33Show/hide
Query:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI
        P+  R     R+T   DW  LCN WE+P+W +K+   KKSRS + Y HRT                      V+L+    +    GW    A + + +M 
Subjt:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI

Query:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG
         L EA   E   PM+   +C +VLGHRS   KG+G
Subjt:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.5e-1133.33Show/hide
Query:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI
        P+  R     R+T   DW  LCN WE+P+W +K+   KKSRS + Y HRT                      V+L+    +    GW    A + + +M 
Subjt:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI

Query:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG
         L EA   E   PM+   +C +VLGHRS   KG+G
Subjt:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.5e-1133.33Show/hide
Query:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI
        P+  R     R+T   DW  LCN WE+P+W +K+   KKSRS + Y HRT                      V+L+    +    GW    A + + +M 
Subjt:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI

Query:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG
         L EA   E   PM+   +C +VLGHRS   KG+G
Subjt:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMG

TrEMBL top hitse value%identityAlignment
A0A438EUC9 Uncharacterized protein5.1e-1031.25Show/hide
Query:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH
        H  V+  EDW+YLC+ + S ++  +S     +RS + +HHR                       +EL+  V +    GW   +A + +EKM+ LQ  P  
Subjt:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH

Query:  EGSQPMTQSAICVEVLGHRSDIAKGMGY
        EG+  MT++ IC  VLG +S   KG+G+
Subjt:  EGSQPMTQSAICVEVLGHRSDIAKGMGY

A0A438G2C0 Uncharacterized protein5.1e-1031.25Show/hide
Query:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH
        H  V+  EDW+YLC+ + S ++  +S     +RS + +HHR                       +EL+  V +    GW   +A + +EKM+ LQ  P  
Subjt:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH

Query:  EGSQPMTQSAICVEVLGHRSDIAKGMGY
        EG+  MT++ IC  VLG +S   KG+G+
Subjt:  EGSQPMTQSAICVEVLGHRSDIAKGMGY

A0A438J796 Uncharacterized protein5.1e-1031.25Show/hide
Query:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH
        H  V+  EDW+YLC+ + S ++  +S     +RS + +HHR                       +EL+  V +    GW   +A + +EKM+ LQ  P  
Subjt:  HNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHR----------------------TVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTH

Query:  EGSQPMTQSAICVEVLGHRSDIAKGMGY
        EG+  MT++ IC  VLG +S   KG+G+
Subjt:  EGSQPMTQSAICVEVLGHRSDIAKGMGY

A0A443P6A9 Transposase, Ptta/En/Spm, plant1.6e-1137.29Show/hide
Query:  EDWEYLCNYWESPKWLEKSRK------------AKKSRSGLQYHHRT-------VELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTHEGSQPMTQSA
        EDWE  CN + S ++ + S+K               S+S ++Y H T       +ELWH   Y   KGWS P+   L+EKMI LQ  PT + S P+T   
Subjt:  EDWEYLCNYWESPKWLEKSRK------------AKKSRSGLQYHHRT-------VELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTHEGSQPMTQSA

Query:  ICVEVLGHRSDIAKGMGY
        IC +VLG R    +G+G+
Subjt:  ICVEVLGHRSDIAKGMGY

A0A6J1DUH3 uncharacterized protein LOC1110232122.2e-1334.56Show/hide
Query:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI
        P   R     R+T  EDW +LC+ WE+P+W E ++K KK+R+ L ++HR                       V+L+ +  Y+   G     A + +E M 
Subjt:  PELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRT----------------------VELWHDVCYHLVKGWSGPKAVELHEKMI

Query:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMGY
         L +APT EG +P+TQ   C +VLG R D  KG+GY
Subjt:  ALQEAPTHEGSQPMTQSAICVEVLGHRSDIAKGMGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCAGAGCTTAGACGAGTGACACTGCATAACAGAGTGACTAAGCTCGAAGATTGGGAATATCTATGCAACTACTGGGAATCACCAAAATGGCTGGAAAAGAGTAG
GAAAGCGAAAAAGAGTCGTTCGGGGCTCCAATACCATCATCGAACAGTGGAACTGTGGCATGATGTTTGCTACCATCTAGTGAAGGGATGGTCAGGTCCTAAAGCCGTTG
AGCTTCACGAAAAGATGATAGCCCTTCAAGAAGCACCAACTCATGAGGGGTCTCAACCTATGACTCAGTCAGCAATTTGTGTAGAAGTGTTAGGGCATCGGTCTGACATA
GCTAAGGGTATGGGTTATCTCCTTTATGGAAAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCAGAGCTTAGACGAGTGACACTGCATAACAGAGTGACTAAGCTCGAAGATTGGGAATATCTATGCAACTACTGGGAATCACCAAAATGGCTGGAAAAGAGTAG
GAAAGCGAAAAAGAGTCGTTCGGGGCTCCAATACCATCATCGAACAGTGGAACTGTGGCATGATGTTTGCTACCATCTAGTGAAGGGATGGTCAGGTCCTAAAGCCGTTG
AGCTTCACGAAAAGATGATAGCCCTTCAAGAAGCACCAACTCATGAGGGGTCTCAACCTATGACTCAGTCAGCAATTTGTGTAGAAGTGTTAGGGCATCGGTCTGACATA
GCTAAGGGTATGGGTTATCTCCTTTATGGAAAGAGATAA
Protein sequenceShow/hide protein sequence
MPPELRRVTLHNRVTKLEDWEYLCNYWESPKWLEKSRKAKKSRSGLQYHHRTVELWHDVCYHLVKGWSGPKAVELHEKMIALQEAPTHEGSQPMTQSAICVEVLGHRSDI
AKGMGYLLYGKR