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Sed0009868 (gene) of Chayote v1 genome

Gene IDSed0009868
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG04:34301061..34301552
RNA-Seq ExpressionSed0009868
SyntenySed0009868
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4564.42Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS EE SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQI+ ST F+NT  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSY PS SNP GYF EL   +M+ WG+DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]8.7e-4463.8Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS  E SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQI+ ST F+NT  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSY PS SNP GYF EL   +M+ WG+DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]1.4e-4161.96Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS EE SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQ + ST F++T  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSYE S SNP GYF      +M+ WG DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]1.3e-4464.42Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS EE SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQI+ ST F+NT  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSY PS SNP GYF EL   +M+ WG DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]3.9e-3654.82Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFAN---KRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYF
        MDS     SS S      ++S  + ++D  DSF N   KR Y CIFCKRGFTNAQALGGHMNIH+KDR NK  +  S SSS+   + +  ST F +  YF
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFAN---KRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYF

Query:  EPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
         PLL RSQV+Y+ S SN HGYF +L   +M+ WGSDLSLQI P+  R +L+N  GVDLELRLGH P
Subjt:  EPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein2.7e-2749.13Show/hide
Query:  LENSSDSSKEESSDRSFNLLKEDDPDSFAN----------KRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQ------STSFSSSILQKKQIDQST
        + N S SS ++  ++     KED      N          KR Y CIFCKRGFTNAQALGGHMNIH+KDR NK  +      S+S SSS+    QI   +
Subjt:  LENSSDSSKEESSDRSFNLLKEDDPDSFAN----------KRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQ------STSFSSSILQKKQIDQST

Query:  AFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLF-NAQGVDLELRLGH
         F N  YF PLL  SQV+Y+ S SN HG     D  +M+ WGSDLSLQI  +  R RL+ N  GVDLELRLGH
Subjt:  AFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLF-NAQGVDLELRLGH

A0A6J1CE07 transcriptional regulator TAC1-like3.9e-3457.14Show/hide
Query:  MDS-KNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTS-----FSSSILQKKQIDQSTAFMNT
        MDS K L +SSDSS EE    +  ++K D      NKR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ T+      SSS +  KQI+ S  FMNT
Subjt:  MDS-KNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTS-----FSSSILQKKQIDQSTAFMNT

Query:  HYFEPLLVRSQVSYEPSVSNPHGYFHELD--GSSMHRWGSDLSLQIEPSKERIRL-----FNAQGVDLELRLGHD
         YF     R +V +E S SNP GYF EL         WGSDLSLQI PSK RIR       N +G+DLELRLGHD
Subjt:  HYFEPLLVRSQVSYEPSVSNPHGYFHELD--GSSMHRWGSDLSLQIEPSKERIRL-----FNAQGVDLELRLGHD

A0A6J1EX07 probable transcriptional regulator RABBIT EARS4.2e-4463.8Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS  E SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQI+ ST F+NT  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSY PS SNP GYF EL   +M+ WG+DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

A0A6J1KKB3 zinc finger protein GIS-like6.7e-4261.96Show/hide
Query:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL
        MDS+ L +SS+SS EE SDR    + EDD DSF  KR YGCIFCKRGFTNAQALGGHMNIH+KDRANK KQ  SF    +  KQ + ST F++T  FEPL
Subjt:  MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPL

Query:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
        LV S+VSYE S SNP GYF      +M+ WG DLSL+IEPSK R  +++ +G+DLELRLGH P
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

I1NI61 C2H2-type domain-containing protein1.5e-1742.37Show/hide
Query:  SSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTA--FMNTHYFEPL------
        S D S EE+         + D D+   KR Y C FCKRGFTNAQALGGHMNIH+KDRA K KQ T  +S  + K   D STA  F++    +P       
Subjt:  SSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTA--FMNTHYFEPL------

Query:  LVRSQVSYEPSVSNPHGYFHELDGS-------SMHRWGSDLSLQIEPS--KERIRLF-----NAQGVDLELRLGHDP
        L+ SQ++++P    PH +++E   S       +    G++LSLQI PS   + I  F         VDLELRLGHDP
Subjt:  LVRSQVSYEPSVSNPHGYFHELDGS-------SMHRWGSDLSLQIEPS--KERIRLF-----NAQGVDLELRLGHDP

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 105.7e-0648.15Show/hide
Query:  SKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRA
        S +ESS       ++D   S    R Y C FC+R F +AQALGGHMN+H++DRA
Subjt:  SKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRA

P93751 Zinc finger protein 89.1e-0433.33Show/hide
Query:  SDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHY
        +D S E   D+     K+ D D+  N+RF  C +C R F  +QALGGH N HK++R +  + S +      Q         F+N H+
Subjt:  SDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHY

Q38895 Transcriptional regulator SUPERMAN6.7e-0734.58Show/hide
Query:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSL
        R Y C FCKR F +AQALGGHMN+H++DRA    Q +  SSS         S  + N +Y    +  S     P   +P   F  L   S  R+ + L  
Subjt:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSL

Query:  QIEPSKE
         + P  +
Subjt:  QIEPSKE

Q9LHS9 Probable transcriptional regulator RABBIT EARS6.1e-0834.11Show/hide
Query:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDG--------SSMH
        R Y C FC R F +AQALGGHMN+H++DRA   +QS S SS+       DQ+T        + L V S+V  +     P+G   E+          SSM 
Subjt:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDG--------SSMH

Query:  RWGSD------------LSLQIEPSKERI
        R+  D            LS + +P K+++
Subjt:  RWGSD------------LSLQIEPSKERI

Q9SR34 Transcriptional regulator TAC12.0e-0649.21Show/hide
Query:  KNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRA
        KN ++ SDS  + S         +   DS    R Y C FC RGF+NAQALGGHMNIH++DRA
Subjt:  KNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRA

Arabidopsis top hitse value%identityAlignment
AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein4.8e-0834.58Show/hide
Query:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSL
        R Y C FCKR F +AQALGGHMN+H++DRA    Q +  SSS         S  + N +Y    +  S     P   +P   F  L   S  R+ + L  
Subjt:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWGSDLSL

Query:  QIEPSKE
         + P  +
Subjt:  QIEPSKE

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-0743.66Show/hide
Query:  NKRFYGCIFCKRGFTNAQALGGHMNIHKKDR---ANKGKQSTSFSSSI-LQKKQIDQSTAFMNTHYFEPLL
        N+R Y C  CKRGFTN QALGGH NIH+++R    +    S SF  S+ L  +    ST F N   + P +
Subjt:  NKRFYGCIFCKRGFTNAQALGGHMNIHKKDR---ANKGKQSTSFSSSI-LQKKQIDQSTAFMNTHYFEPLL

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein2.1e-0833.33Show/hide
Query:  SFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWG
        S +  R Y C FC+RGF+NAQALGGHMNIH+KDRA K +Q+       L+++  + +    + + F   L+      +       G     D  S    G
Subjt:  SFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDGSSMHRWG

Query:  SDLSLQIEPSKERIRLFNAQGVDLELRLGHDP
         +    +   ++ +   +A  +DLELRLG DP
Subjt:  SDLSLQIEPSKERIRLFNAQGVDLELRLGHDP

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein4.3e-0934.11Show/hide
Query:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDG--------SSMH
        R Y C FC R F +AQALGGHMN+H++DRA   +QS S SS+       DQ+T        + L V S+V  +     P+G   E+          SSM 
Subjt:  RFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEPSVSNPHGYFHELDG--------SSMH

Query:  RWGSD------------LSLQIEPSKERI
        R+  D            LS + +P K+++
Subjt:  RWGSD------------LSLQIEPSKERI

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein4.6e-1171.79Show/hide
Query:  SFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGK
        S   +R Y C FCKRGFTNAQALGGHMNIH++DR NK K
Subjt:  SFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAAAAATTTAGAAAACAGTTCAGATAGTTCAAAAGAAGAGTCATCTGATCGATCATTCAACCTACTAAAGGAAGACGATCCAGATTCTTTCGCCAATAAACG
TTTTTATGGGTGCATATTTTGCAAGCGGGGATTCACGAACGCTCAAGCTCTTGGTGGCCACATGAATATTCATAAAAAAGATAGAGCCAATAAAGGAAAACAAAGCACCT
CTTTTTCTTCTTCTATCCTTCAAAAGAAGCAAATTGACCAATCTACAGCTTTCATGAACACCCACTATTTTGAGCCACTTTTGGTTAGATCTCAAGTGAGTTATGAGCCA
TCGGTTTCAAACCCACATGGTTACTTCCATGAACTTGACGGTTCGAGCATGCACCGTTGGGGGTCAGATTTGAGCCTACAAATTGAACCAAGCAAGGAGAGGATCAGACT
TTTCAATGCCCAGGGAGTGGACTTGGAGCTTCGACTTGGCCATGATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAAAAAATTTAGAAAACAGTTCAGATAGTTCAAAAGAAGAGTCATCTGATCGATCATTCAACCTACTAAAGGAAGACGATCCAGATTCTTTCGCCAATAAACG
TTTTTATGGGTGCATATTTTGCAAGCGGGGATTCACGAACGCTCAAGCTCTTGGTGGCCACATGAATATTCATAAAAAAGATAGAGCCAATAAAGGAAAACAAAGCACCT
CTTTTTCTTCTTCTATCCTTCAAAAGAAGCAAATTGACCAATCTACAGCTTTCATGAACACCCACTATTTTGAGCCACTTTTGGTTAGATCTCAAGTGAGTTATGAGCCA
TCGGTTTCAAACCCACATGGTTACTTCCATGAACTTGACGGTTCGAGCATGCACCGTTGGGGGTCAGATTTGAGCCTACAAATTGAACCAAGCAAGGAGAGGATCAGACT
TTTCAATGCCCAGGGAGTGGACTTGGAGCTTCGACTTGGCCATGATCCATAA
Protein sequenceShow/hide protein sequence
MDSKNLENSSDSSKEESSDRSFNLLKEDDPDSFANKRFYGCIFCKRGFTNAQALGGHMNIHKKDRANKGKQSTSFSSSILQKKQIDQSTAFMNTHYFEPLLVRSQVSYEP
SVSNPHGYFHELDGSSMHRWGSDLSLQIEPSKERIRLFNAQGVDLELRLGHDP